RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 UNCXA6NJT0 531 aa9.25□□□□□ -0.93
CHD1-208ENST00000512392 PBX2P40425 430 aa9.25□□□□□ -0.93
CHD1-208ENST00000512392 CERS3Q8IU89 383 aa9.25□□□□□ -0.93
CHD1-208ENST00000512392 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
CHD1-208ENST00000512392 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CHD1-208ENST00000512392 HIC1Q14526 733 aa9.24□□□□□ -0.93
CHD1-208ENST00000512392 BRPF3Q9ULD4 1205 aa9.24□□□□□ -0.93
CHD1-208ENST00000512392 ARHGAP33O14559 1287 aa9.24□□□□□ -0.93
CHD1-208ENST00000512392 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
CHD1-208ENST00000512392 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
CHD1-208ENST00000512392 POM121Q96HA1 1249 aa9.23□□□□□ -0.93
CHD1-208ENST00000512392 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
CHD1-208ENST00000512392 GNPATO15228 680 aa9.23□□□□□ -0.93
CHD1-208ENST00000512392 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
CHD1-208ENST00000512392 COL9A1P20849 921 aa9.22□□□□□ -0.93
CHD1-208ENST00000512392 POTEEQ6S8J3 1075 aa9.22□□□□□ -0.93
CHD1-208ENST00000512392 IGSF5Q9NSI5 407 aa9.21□□□□□ -0.93
CHD1-208ENST00000512392 MCM6Q14566 821 aa9.21□□□□□ -0.94
CHD1-208ENST00000512392 RBM27Q9P2N5 1060 aaKnown RBP9.2□□□□□ -0.94
CHD1-208ENST00000512392 PSEN2P49810 448 aa9.19□□□□□ -0.94
CHD1-208ENST00000512392 PRSS12P56730 875 aa9.19□□□□□ -0.94
CHD1-208ENST00000512392 POTEGQ6S5H5 508 aa9.19□□□□□ -0.94
CHD1-208ENST00000512392 ZNF592Q92610 1267 aa9.19□□□□□ -0.94
CHD1-208ENST00000512392 AXIN2Q9Y2T1 843 aa9.19□□□□□ -0.94
CHD1-208ENST00000512392 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
CHD1-208ENST00000512392 TMED8Q6PL24 325 aaPredicted RBP9.17□□□□□ -0.94
CHD1-208ENST00000512392 TTC13Q8NBP0 860 aa9.17□□□□□ -0.94
CHD1-208ENST00000512392 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
CHD1-208ENST00000512392 POTEMA6NI47 508 aa9.17□□□□□ -0.94
CHD1-208ENST00000512392 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
CHD1-208ENST00000512392 PLSCR2Q9NRY7 297 aa9.17□□□□□ -0.94
CHD1-208ENST00000512392 ARID4BQ4LE39 1312 aaPredicted RBP9.16□□□□□ -0.94
CHD1-208ENST00000512392 MINK1Q8N4C8 1332 aaPredicted RBP9.16□□□□□ -0.94
CHD1-208ENST00000512392 FECHP22830 423 aa9.15□□□□□ -0.94
CHD1-208ENST00000512392 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
CHD1-208ENST00000512392 DMRTA1Q5VZB9 504 aa9.15□□□□□ -0.94
CHD1-208ENST00000512392 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
CHD1-208ENST00000512392 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.95
CHD1-208ENST00000512392 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
CHD1-208ENST00000512392 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
CHD1-208ENST00000512392 CADPSQ9ULU8 1353 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 TK2O00142 265 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 IRF6O14896 467 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 KDM4AO75164 1064 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 CCDC27Q2M243 656 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 LSM11P83369 360 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD1-208ENST00000512392 PACS2Q86VP3 889 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 TSKSQ9UJT2 592 aa9.13□□□□□ -0.95
CHD1-208ENST00000512392 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
CHD1-208ENST00000512392 IRX6P78412 446 aaPredicted RBP9.12□□□□□ -0.95
CHD1-208ENST00000512392 PROX2Q3B8N5 592 aa9.12□□□□□ -0.95
CHD1-208ENST00000512392 FAM198AQ9UFP1 575 aa9.12□□□□□ -0.95
CHD1-208ENST00000512392 MYT1LQ9UL68 1186 aa9.12□□□□□ -0.95
CHD1-208ENST00000512392 VPS9D1Q9Y2B5 631 aa9.12□□□□□ -0.95
CHD1-208ENST00000512392 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 PSMD1Q99460 953 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHD1-208ENST00000512392 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 OATP04181 439 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 KIAA1468Q9P260 1216 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
CHD1-208ENST00000512392 TICAM2Q86XR7 235 aa9.09□□□□□ -0.95
CHD1-208ENST00000512392 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
CHD1-208ENST00000512392 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
CHD1-208ENST00000512392 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 CCDC102AQ96A19 550 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 GOPCQ9HD26 462 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 TATDN2Q93075 761 aa9.08□□□□□ -0.96
CHD1-208ENST00000512392 KCNA1Q09470 495 aa9.07□□□□□ -0.96
CHD1-208ENST00000512392 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
CHD1-208ENST00000512392 ANKRD13DQ6ZTN6 518 aa9.07□□□□□ -0.96
CHD1-208ENST00000512392 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
CHD1-208ENST00000512392 BRD1O95696 1058 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
CHD1-208ENST00000512392 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 EYA1Q99502 592 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 PCDH10Q9P2E7 1040 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
CHD1-208ENST00000512392 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
CHD1-208ENST00000512392 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
CHD1-208ENST00000512392 PXYLP1Q8TE99 480 aa9.05□□□□□ -0.96
CHD1-208ENST00000512392 SPATA32Q96LK8 384 aa9.05□□□□□ -0.96
CHD1-208ENST00000512392 PPP1R15AO75807 674 aaPredicted RBP9.04□□□□□ -0.96
CHD1-208ENST00000512392 NBPF3Q9H094 633 aa9.04□□□□□ -0.96
CHD1-208ENST00000512392 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
CHD1-208ENST00000512392 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
CHD1-208ENST00000512392 HRO43593 1189 aa9.04□□□□□ -0.96
CHD1-208ENST00000512392 ZNF526Q8TF50 670 aaPredicted RBP9.04□□□□□ -0.96
CHD1-208ENST00000512392 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
CHD1-208ENST00000512392 PATL2C9JE40 543 aaKnown RBP9.03□□□□□ -0.96
CHD1-208ENST00000512392 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
CHD1-208ENST00000512392 PRDM16Q9HAZ2 1276 aa9.03□□□□□ -0.96
CHD1-208ENST00000512392 IVNS1ABPQ9Y6Y0 642 aa9.03□□□□□ -0.96
CHD1-208ENST00000512392 CLSTN1O94985 981 aa9.03□□□□□ -0.96
CHD1-208ENST00000512392 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHD1-208ENST00000512392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms