RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
GYPB-212ENST00000511198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
GYPB-212ENST00000511198 DNAJB2P25686 324 aa11.95□□□□□ -0.5
GYPB-212ENST00000511198 PXYLP1Q8TE99 480 aa11.95□□□□□ -0.5
GYPB-212ENST00000511198 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
GYPB-212ENST00000511198 OATP04181 439 aa11.94□□□□□ -0.5
GYPB-212ENST00000511198 TMEM134Q9H6X4 195 aa11.94□□□□□ -0.5
GYPB-212ENST00000511198 IFFO2Q5TF58 517 aa11.93□□□□□ -0.5
GYPB-212ENST00000511198 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
GYPB-212ENST00000511198 RNF40O75150 1001 aa11.92□□□□□ -0.5
GYPB-212ENST00000511198 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
GYPB-212ENST00000511198 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
GYPB-212ENST00000511198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
GYPB-212ENST00000511198 APLP1P51693 650 aa11.88□□□□□ -0.51
GYPB-212ENST00000511198 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
GYPB-212ENST00000511198 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
GYPB-212ENST00000511198 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
GYPB-212ENST00000511198 SLC4A3P48751 1232 aa11.84□□□□□ -0.51
GYPB-212ENST00000511198 MAP2K5Q13163 448 aa11.84□□□□□ -0.51
GYPB-212ENST00000511198 TJAP1Q5JTD0 557 aa11.84□□□□□ -0.51
GYPB-212ENST00000511198 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
GYPB-212ENST00000511198 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
GYPB-212ENST00000511198 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
GYPB-212ENST00000511198 KCNC4Q03721 635 aa11.83□□□□□ -0.52
GYPB-212ENST00000511198 SLC10A3P09131 477 aa11.82□□□□□ -0.52
GYPB-212ENST00000511198 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
GYPB-212ENST00000511198 NESP48681 1621 aa11.82□□□□□ -0.52
GYPB-212ENST00000511198 IRF6O14896 467 aa11.81□□□□□ -0.52
GYPB-212ENST00000511198 MTRQ99707 1265 aa11.81□□□□□ -0.52
GYPB-212ENST00000511198 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
GYPB-212ENST00000511198 A0A0G2JS52 829 aa11.79□□□□□ -0.52
GYPB-212ENST00000511198 DAXXQ9UER7 740 aaPredicted RBP11.79□□□□□ -0.52
GYPB-212ENST00000511198 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
GYPB-212ENST00000511198 ZC3H15Q8WU90 426 aaKnown RBP11.76□□□□□ -0.53
GYPB-212ENST00000511198 ZNF516Q92618 1163 aa11.76□□□□□ -0.53
GYPB-212ENST00000511198 PRR14Q9BWN1 585 aa11.76□□□□□ -0.53
GYPB-212ENST00000511198 ACTN4O43707 911 aaKnown RBP11.75□□□□□ -0.53
GYPB-212ENST00000511198 ZMYND10O75800 440 aa11.75□□□□□ -0.53
GYPB-212ENST00000511198 CFHP08603 1231 aa11.75□□□□□ -0.53
GYPB-212ENST00000511198 RIMBP3CA6NJZ7 1639 aa11.75□□□□□ -0.53
GYPB-212ENST00000511198 RIMBP3BA6NNM3 1639 aa11.75□□□□□ -0.53
GYPB-212ENST00000511198 RIMBP3Q9UFD9 1639 aa11.75□□□□□ -0.53
GYPB-212ENST00000511198 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
GYPB-212ENST00000511198 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
GYPB-212ENST00000511198 COPS2P61201 443 aa11.72□□□□□ -0.53
GYPB-212ENST00000511198 KMT5BQ4FZB7 885 aa11.72□□□□□ -0.53
GYPB-212ENST00000511198 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
GYPB-212ENST00000511198 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.53
GYPB-212ENST00000511198 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
GYPB-212ENST00000511198 BLOC1S3Q6QNY0 202 aa11.71□□□□□ -0.53
GYPB-212ENST00000511198 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
GYPB-212ENST00000511198 ZPR1O75312 459 aa11.68□□□□□ -0.54
GYPB-212ENST00000511198 SULF1Q8IWU6 871 aa11.68□□□□□ -0.54
GYPB-212ENST00000511198 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
GYPB-212ENST00000511198 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
GYPB-212ENST00000511198 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
GYPB-212ENST00000511198 RGS20O76081 388 aa11.66□□□□□ -0.54
GYPB-212ENST00000511198 KRI1Q8N9T8 703 aaKnown RBP11.66□□□□□ -0.54
GYPB-212ENST00000511198 GCGRP47871 477 aa11.65□□□□□ -0.54
GYPB-212ENST00000511198 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
GYPB-212ENST00000511198 SMARCA2P51531 1590 aa11.65□□□□□ -0.54
GYPB-212ENST00000511198 CD46P15529 392 aa11.63□□□□□ -0.55
GYPB-212ENST00000511198 CYB5RLQ6IPT4 315 aa11.63□□□□□ -0.55
GYPB-212ENST00000511198 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
GYPB-212ENST00000511198 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
GYPB-212ENST00000511198 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
GYPB-212ENST00000511198 FUT2Q10981 343 aa11.61□□□□□ -0.55
GYPB-212ENST00000511198 REPIN1Q9BWE0 567 aaKnown RBP11.61□□□□□ -0.55
GYPB-212ENST00000511198 GPCPD1Q9NPB8 672 aa11.61□□□□□ -0.55
GYPB-212ENST00000511198 TLL1O43897 1013 aa11.6□□□□□ -0.55
GYPB-212ENST00000511198 CLCN1P35523 988 aa11.6□□□□□ -0.55
GYPB-212ENST00000511198 SCUBE3Q8IX30 993 aa11.6□□□□□ -0.55
GYPB-212ENST00000511198 BCANQ96GW7 911 aa11.6□□□□□ -0.55
GYPB-212ENST00000511198 NR1I2O75469 434 aa11.59□□□□□ -0.55
GYPB-212ENST00000511198 FAM217BQ9NTX9 383 aaPredicted RBP11.59□□□□□ -0.55
GYPB-212ENST00000511198 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
GYPB-212ENST00000511198 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
GYPB-212ENST00000511198 MORN1Q5T089 497 aa11.58□□□□□ -0.56
GYPB-212ENST00000511198 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
GYPB-212ENST00000511198 AMHR2Q16671 573 aa11.57□□□□□ -0.56
GYPB-212ENST00000511198 KIF21AQ7Z4S6 1674 aa11.56□□□□□ -0.56
GYPB-212ENST00000511198 TRIM66O15016 1216 aa11.54□□□□□ -0.56
GYPB-212ENST00000511198 SLC27A5Q9Y2P5 690 aa11.54□□□□□ -0.56
GYPB-212ENST00000511198 ADH1BP00325 375 aa11.53□□□□□ -0.56
GYPB-212ENST00000511198 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
GYPB-212ENST00000511198 AK7Q96M32 723 aa11.53□□□□□ -0.56
GYPB-212ENST00000511198 KDM4AO75164 1064 aa11.52□□□□□ -0.57
GYPB-212ENST00000511198 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
GYPB-212ENST00000511198 GGCXP38435 758 aa11.51□□□□□ -0.57
GYPB-212ENST00000511198 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
GYPB-212ENST00000511198 S1PR4O95977 384 aa11.5□□□□□ -0.57
GYPB-212ENST00000511198 TTLL12Q14166 644 aaPredicted RBP11.5□□□□□ -0.57
GYPB-212ENST00000511198 SPSB2Q99619 263 aa11.5□□□□□ -0.57
GYPB-212ENST00000511198 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
GYPB-212ENST00000511198 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
GYPB-212ENST00000511198 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
GYPB-212ENST00000511198 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
GYPB-212ENST00000511198 PARP9Q8IXQ6 854 aa11.48□□□□□ -0.57
GYPB-212ENST00000511198 HLA-CQ95604 372 aa11.48□□□□□ -0.57
GYPB-212ENST00000511198 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 700.5 ms