RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 LAMC3Q9Y6N6 1575 aa10.03□□□□□ -0.8
CAST-232ENST00000510500 C19orf67A6NJJ6 358 aa10.03□□□□□ -0.8
CAST-232ENST00000510500 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
CAST-232ENST00000510500 PPP4R3BQ5MIZ7 849 aa10.03□□□□□ -0.8
CAST-232ENST00000510500 MKL1Q969V6 931 aa10.03□□□□□ -0.8
CAST-232ENST00000510500 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.8
CAST-232ENST00000510500 IRF6O14896 467 aa10.02□□□□□ -0.81
CAST-232ENST00000510500 SETDB1Q15047 1291 aa10.02□□□□□ -0.81
CAST-232ENST00000510500 MICAL1Q8TDZ2 1067 aa10.02□□□□□ -0.81
CAST-232ENST00000510500 MAP7D2Q96T17 732 aa10.02□□□□□ -0.81
CAST-232ENST00000510500 VGLL3A8MV65 326 aa10.01□□□□□ -0.81
CAST-232ENST00000510500 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
CAST-232ENST00000510500 KIF20AO95235 890 aa10.01□□□□□ -0.81
CAST-232ENST00000510500 SDR16C5Q8N3Y7 309 aa10□□□□□ -0.81
CAST-232ENST00000510500 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
CAST-232ENST00000510500 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
CAST-232ENST00000510500 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
CAST-232ENST00000510500 KCNA1Q09470 495 aa9.99□□□□□ -0.81
CAST-232ENST00000510500 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
CAST-232ENST00000510500 RAI14Q9P0K7 980 aa9.99□□□□□ -0.81
CAST-232ENST00000510500 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
CAST-232ENST00000510500 SREK1Q8WXA9 508 aaKnown RBP9.98□□□□□ -0.81
CAST-232ENST00000510500 DDRGK1Q96HY6 314 aa9.98□□□□□ -0.81
CAST-232ENST00000510500 AK7Q96M32 723 aa9.98□□□□□ -0.81
CAST-232ENST00000510500 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
CAST-232ENST00000510500 GOLIM4O00461 696 aa9.98□□□□□ -0.81
CAST-232ENST00000510500 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
CAST-232ENST00000510500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
CAST-232ENST00000510500 TPM2P07951 284 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 ARID4AP29374 1257 aaPredicted RBP9.97□□□□□ -0.81
CAST-232ENST00000510500 DMTNQ08495 405 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 NBPF6Q5VWK0 638 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 NBPF5PQ86XG9 351 aaPredicted RBP9.97□□□□□ -0.81
CAST-232ENST00000510500 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 NBPF4Q96M43 638 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 RIMBP3CA6NJZ7 1639 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 RIMBP3BA6NNM3 1639 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 RIMBP3Q9UFD9 1639 aa9.97□□□□□ -0.81
CAST-232ENST00000510500 CALRP27797 417 aaKnown RBP9.96□□□□□ -0.81
CAST-232ENST00000510500 MORC4Q8TE76 937 aa9.96□□□□□ -0.81
CAST-232ENST00000510500 TNNT2P45379 298 aaPredicted RBP9.96□□□□□ -0.82
CAST-232ENST00000510500 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.82
CAST-232ENST00000510500 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
CAST-232ENST00000510500 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
CAST-232ENST00000510500 RBM47A0AV96 593 aaKnown RBP9.95□□□□□ -0.82
CAST-232ENST00000510500 HDAC1Q13547 482 aaPredicted RBP9.95□□□□□ -0.82
CAST-232ENST00000510500 GOLGA6L3A6NEY3 463 aa9.94□□□□□ -0.82
CAST-232ENST00000510500 SSR1P43307 286 aaKnown RBP9.94□□□□□ -0.82
CAST-232ENST00000510500 ZKSCAN8Q15776 578 aaPredicted RBP9.94□□□□□ -0.82
CAST-232ENST00000510500 DNTTIP2Q5QJE6 756 aaKnown RBP9.94□□□□□ -0.82
CAST-232ENST00000510500 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
CAST-232ENST00000510500 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
CAST-232ENST00000510500 ZNF500O60304 480 aaPredicted RBP9.93□□□□□ -0.82
CAST-232ENST00000510500 RAB11FIP3O75154 756 aa9.93□□□□□ -0.82
CAST-232ENST00000510500 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
CAST-232ENST00000510500 KIAA1522Q9P206 1035 aaPredicted RBP9.93□□□□□ -0.82
CAST-232ENST00000510500 IGF1RP08069 1367 aa9.93□□□□□ -0.82
CAST-232ENST00000510500 MTA1Q13330 715 aa9.93□□□□□ -0.82
CAST-232ENST00000510500 ANKRD23Q86SG2 305 aa9.93□□□□□ -0.82
CAST-232ENST00000510500 FEZ2Q9UHY8 353 aaPredicted RBP9.93□□□□□ -0.82
CAST-232ENST00000510500 SATB1Q01826 763 aa9.92□□□□□ -0.82
CAST-232ENST00000510500 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
CAST-232ENST00000510500 NUB1Q9Y5A7 615 aa9.92□□□□□ -0.82
CAST-232ENST00000510500 WDR62O43379 1518 aa9.92□□□□□ -0.82
CAST-232ENST00000510500 TCF3P15923 654 aa9.91□□□□□ -0.82
CAST-232ENST00000510500 KRBA2Q6ZNG9 492 aa9.91□□□□□ -0.82
CAST-232ENST00000510500 ZNF662Q6ZS27 426 aa9.91□□□□□ -0.82
CAST-232ENST00000510500 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
CAST-232ENST00000510500 SMC5Q8IY18 1101 aa9.91□□□□□ -0.82
CAST-232ENST00000510500 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
CAST-232ENST00000510500 MRC2Q9UBG0 1479 aa9.9□□□□□ -0.82
CAST-232ENST00000510500 ARMCX6Q7L4S7 300 aa9.9□□□□□ -0.82
CAST-232ENST00000510500 ARHGEF1Q92888 912 aaKnown RBP9.9□□□□□ -0.82
CAST-232ENST00000510500 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
CAST-232ENST00000510500 C8orf37Q96NL8 207 aa9.9□□□□□ -0.82
CAST-232ENST00000510500 RPS6KL1Q9Y6S9 549 aa9.9□□□□□ -0.82
CAST-232ENST00000510500 PPFIA4O75335 1185 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 LETM1O95202 739 aaPredicted RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 FOXD4Q12950 439 aaPredicted RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
CAST-232ENST00000510500 FNBP4Q8N3X1 1017 aaPredicted RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 UBXN4Q92575 508 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 POTEMA6NI47 508 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 PEX14O75381 377 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 PPP1R15AO75807 674 aaPredicted RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 CLCN1P35523 988 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 GIMAP6Q6P9H5 292 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 GTPBP4Q9BZE4 634 aaKnown RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 FAM117AQ9C073 453 aa9.89□□□□□ -0.83
CAST-232ENST00000510500 PNNQ9H307 717 aaKnown RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 RBM28Q9NW13 759 aaKnown RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 MAGEC2Q9UBF1 373 aaPredicted RBP9.89□□□□□ -0.83
CAST-232ENST00000510500 MAP4K4O95819 1239 aaPredicted RBP9.88□□□□□ -0.83
CAST-232ENST00000510500 GSE1Q14687 1217 aa9.88□□□□□ -0.83
CAST-232ENST00000510500 CCDC181Q5TID7 509 aa9.88□□□□□ -0.83
CAST-232ENST00000510500 MPNDQ8N594 471 aa9.88□□□□□ -0.83
CAST-232ENST00000510500 MRRFQ96E11 262 aaKnown RBP9.88□□□□□ -0.83
CAST-232ENST00000510500 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms