RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 UHRF1BP1Q6BDS2 1440 aa22.24■■□□□ 1.15
SQSTM1-213ENST00000510187 STAC3Q96MF2 364 aa22.23■■□□□ 1.15
SQSTM1-213ENST00000510187 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
SQSTM1-213ENST00000510187 RPGRIP1LQ68CZ1 1315 aa22.22■■□□□ 1.15
SQSTM1-213ENST00000510187 NLRP1Q9C000 1473 aa22.21■■□□□ 1.15
SQSTM1-213ENST00000510187 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
SQSTM1-213ENST00000510187 MYT1Q01538 1121 aa22.2■■□□□ 1.14
SQSTM1-213ENST00000510187 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
SQSTM1-213ENST00000510187 PTPRMP28827 1452 aa22.19■■□□□ 1.14
SQSTM1-213ENST00000510187 A2ML1A8K2U0 1454 aa22.18■■□□□ 1.14
SQSTM1-213ENST00000510187 MYOM2P54296 1465 aa22.17■■□□□ 1.14
SQSTM1-213ENST00000510187 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
SQSTM1-213ENST00000510187 IFT172Q9UG01 1749 aa22.16■■□□□ 1.14
SQSTM1-213ENST00000510187 ADGRF5Q8IZF2 1346 aa22.16■■□□□ 1.14
SQSTM1-213ENST00000510187 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
SQSTM1-213ENST00000510187 POLR1AO95602 1720 aaPredicted RBP22.15■■□□□ 1.14
SQSTM1-213ENST00000510187 PPLO60437 1756 aa22.14■■□□□ 1.14
SQSTM1-213ENST00000510187 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.14
SQSTM1-213ENST00000510187 VGFO15240 615 aaPredicted RBP22.14■■□□□ 1.13
SQSTM1-213ENST00000510187 RALGAPBQ86X10 1494 aa22.13■■□□□ 1.13
SQSTM1-213ENST00000510187 MYO3AQ8NEV4 1616 aa22.12■■□□□ 1.13
SQSTM1-213ENST00000510187 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
SQSTM1-213ENST00000510187 KDM5AP29375 1690 aaKnown RBP22.12■■□□□ 1.13
SQSTM1-213ENST00000510187 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
SQSTM1-213ENST00000510187 NEFLP07196 543 aa22.11■■□□□ 1.13
SQSTM1-213ENST00000510187 UBR1Q8IWV7 1749 aa22.11■■□□□ 1.13
SQSTM1-213ENST00000510187 NRXN1Q9ULB1 1477 aa22.11■■□□□ 1.13
SQSTM1-213ENST00000510187 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
SQSTM1-213ENST00000510187 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
SQSTM1-213ENST00000510187 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
SQSTM1-213ENST00000510187 ZFYVE9O95405 1425 aa22.09■■□□□ 1.13
SQSTM1-213ENST00000510187 FKBP8Q14318 412 aa22.08■■□□□ 1.12
SQSTM1-213ENST00000510187 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.12
SQSTM1-213ENST00000510187 TMEM2Q9UHN6 1383 aa22.08■■□□□ 1.12
SQSTM1-213ENST00000510187 PIK3C2GO75747 1445 aa22.08■■□□□ 1.12
SQSTM1-213ENST00000510187 CEP170BQ9Y4F5 1589 aaPredicted RBP22.07■■□□□ 1.12
SQSTM1-213ENST00000510187 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
SQSTM1-213ENST00000510187 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
SQSTM1-213ENST00000510187 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
SQSTM1-213ENST00000510187 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.06■■□□□ 1.12
SQSTM1-213ENST00000510187 SETD1BQ9UPS6 1966 aaKnown RBP22.06■■□□□ 1.12
SQSTM1-213ENST00000510187 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
SQSTM1-213ENST00000510187 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
SQSTM1-213ENST00000510187 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
SQSTM1-213ENST00000510187 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
SQSTM1-213ENST00000510187 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
SQSTM1-213ENST00000510187 KIAA1210Q9ULL0 1709 aa22.01■■□□□ 1.11
SQSTM1-213ENST00000510187 ZNF142P52746 1687 aaPredicted RBP22■■□□□ 1.11
SQSTM1-213ENST00000510187 USP47Q96K76 1375 aa22■■□□□ 1.11
SQSTM1-213ENST00000510187 EID1Q9Y6B2 187 aa22■■□□□ 1.11
SQSTM1-213ENST00000510187 SLIT1O75093 1534 aa21.99■■□□□ 1.11
SQSTM1-213ENST00000510187 TXNDC2Q86VQ3 553 aa21.99■■□□□ 1.11
SQSTM1-213ENST00000510187 ARHGAP23Q9P227 1491 aa21.98■■□□□ 1.11
SQSTM1-213ENST00000510187 LTKP29376 864 aa21.98■■□□□ 1.11
SQSTM1-213ENST00000510187 C11orf95C9JLR9 678 aaPredicted RBP21.97■■□□□ 1.11
SQSTM1-213ENST00000510187 LAMC1P11047 1609 aa21.96■■□□□ 1.11
SQSTM1-213ENST00000510187 HNRNPUQ00839 825 aaKnown RBP eCLIP21.96■■□□□ 1.11
SQSTM1-213ENST00000510187 PRKRIP1Q9H875 184 aaPredicted RBP21.96■■□□□ 1.11
SQSTM1-213ENST00000510187 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
SQSTM1-213ENST00000510187 BCANQ96GW7 911 aa21.94■■□□□ 1.1
SQSTM1-213ENST00000510187 TMEM132EQ6IEE7 984 aa21.94■■□□□ 1.1
SQSTM1-213ENST00000510187 SETBP1Q9Y6X0 1596 aa21.94■■□□□ 1.1
SQSTM1-213ENST00000510187 PLEKHG1Q9ULL1 1385 aa21.93■■□□□ 1.1
SQSTM1-213ENST00000510187 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
SQSTM1-213ENST00000510187 ALKQ9UM73 1620 aa21.92■■□□□ 1.1
SQSTM1-213ENST00000510187 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
SQSTM1-213ENST00000510187 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
SQSTM1-213ENST00000510187 ANKLE2Q86XL3 938 aa21.9■■□□□ 1.1
SQSTM1-213ENST00000510187 NRXN3Q9Y4C0 1643 aa21.89■■□□□ 1.09
SQSTM1-213ENST00000510187 IQGAP1P46940 1657 aa21.87■■□□□ 1.09
SQSTM1-213ENST00000510187 EIF3AQ14152 1382 aaKnown RBP21.86■■□□□ 1.09
SQSTM1-213ENST00000510187 ERICH6BQ5W0A0 696 aa21.86■■□□□ 1.09
SQSTM1-213ENST00000510187 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
SQSTM1-213ENST00000510187 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
SQSTM1-213ENST00000510187 ADAMTS13Q76LX8 1427 aa21.85■■□□□ 1.09
SQSTM1-213ENST00000510187 SLC26A8Q96RN1 970 aa21.83■■□□□ 1.09
SQSTM1-213ENST00000510187 STK26Q9P289 416 aa21.83■■□□□ 1.09
SQSTM1-213ENST00000510187 SETD1AO15047 1707 aaKnown RBP21.83■■□□□ 1.09
SQSTM1-213ENST00000510187 METP08581 1390 aa21.83■■□□□ 1.09
SQSTM1-213ENST00000510187 ZBED9Q6R2W3 1325 aa21.83■■□□□ 1.08
SQSTM1-213ENST00000510187 MRS2Q9HD23 443 aa21.83■■□□□ 1.08
SQSTM1-213ENST00000510187 YTHDC2Q9H6S0 1430 aaKnown RBP21.82■■□□□ 1.08
SQSTM1-213ENST00000510187 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
SQSTM1-213ENST00000510187 MED14O60244 1454 aa21.8■■□□□ 1.08
SQSTM1-213ENST00000510187 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
SQSTM1-213ENST00000510187 HSPA2P54652 639 aa21.8■■□□□ 1.08
SQSTM1-213ENST00000510187 TBX22Q9Y458 520 aa21.8■■□□□ 1.08
SQSTM1-213ENST00000510187 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
SQSTM1-213ENST00000510187 TESK2Q96S53 571 aa21.79■■□□□ 1.08
SQSTM1-213ENST00000510187 LRPPRCP42704 1394 aaKnown RBP21.78■■□□□ 1.08
SQSTM1-213ENST00000510187 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.08
SQSTM1-213ENST00000510187 DIP2AQ14689 1571 aa21.77■■□□□ 1.08
SQSTM1-213ENST00000510187 NPHP4O75161 1426 aaPredicted RBP21.76■■□□□ 1.07
SQSTM1-213ENST00000510187 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
SQSTM1-213ENST00000510187 ARHGEF28Q8N1W1 1705 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-213ENST00000510187 TMF1P82094 1093 aa21.73■■□□□ 1.07
SQSTM1-213ENST00000510187 PRAM1Q96QH2 718 aa21.72■■□□□ 1.07
SQSTM1-213ENST00000510187 POGKQ9P215 609 aa21.72■■□□□ 1.07
SQSTM1-213ENST00000510187 FAM9BQ8IZU0 186 aa21.72■■□□□ 1.07
SQSTM1-213ENST00000510187 POLR3GLQ9BT43 218 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms