RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 RBM46Q8TBY0 533 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-212ENST00000509014 NLRP7Q8WX94 980 aa10.48□□□□□ -0.73
CALCOCO2-212ENST00000509014 KCTD12Q96CX2 325 aaKnown RBP10.48□□□□□ -0.73
CALCOCO2-212ENST00000509014 AMHR2Q16671 573 aa10.47□□□□□ -0.73
CALCOCO2-212ENST00000509014 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
CALCOCO2-212ENST00000509014 RCCD1A6NED2 376 aa10.45□□□□□ -0.74
CALCOCO2-212ENST00000509014 PDE4DQ08499 809 aa10.45□□□□□ -0.74
CALCOCO2-212ENST00000509014 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
CALCOCO2-212ENST00000509014 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
CALCOCO2-212ENST00000509014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-212ENST00000509014 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-212ENST00000509014 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
CALCOCO2-212ENST00000509014 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-212ENST00000509014 DNAJB2P25686 324 aa10.42□□□□□ -0.74
CALCOCO2-212ENST00000509014 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
CALCOCO2-212ENST00000509014 TMEM134Q9H6X4 195 aa10.42□□□□□ -0.74
CALCOCO2-212ENST00000509014 BRPF1P55201 1214 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO2-212ENST00000509014 MDM2Q00987 491 aaPredicted RBP10.41□□□□□ -0.74
CALCOCO2-212ENST00000509014 ZFRQ96KR1 1074 aaKnown RBP10.4□□□□□ -0.74
CALCOCO2-212ENST00000509014 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-212ENST00000509014 ERCC6Q03468 1493 aa10.38□□□□□ -0.75
CALCOCO2-212ENST00000509014 PTPN5P54829 565 aa10.38□□□□□ -0.75
CALCOCO2-212ENST00000509014 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
CALCOCO2-212ENST00000509014 CLCN1P35523 988 aa10.37□□□□□ -0.75
CALCOCO2-212ENST00000509014 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-212ENST00000509014 SWT1Q5T5J6 900 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-212ENST00000509014 SAMD7Q7Z3H4 446 aa10.37□□□□□ -0.75
CALCOCO2-212ENST00000509014 NEUROD2Q15784 382 aa10.36□□□□□ -0.75
CALCOCO2-212ENST00000509014 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
CALCOCO2-212ENST00000509014 DAXXQ9UER7 740 aaPredicted RBP10.36□□□□□ -0.75
CALCOCO2-212ENST00000509014 KDM4CQ9H3R0 1056 aa10.34□□□□□ -0.75
CALCOCO2-212ENST00000509014 FAM217BQ9NTX9 383 aaPredicted RBP10.34□□□□□ -0.75
CALCOCO2-212ENST00000509014 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
CALCOCO2-212ENST00000509014 MS4A1P11836 297 aa10.32□□□□□ -0.76
CALCOCO2-212ENST00000509014 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
CALCOCO2-212ENST00000509014 SOWAHBA6NEL2 793 aa10.31□□□□□ -0.76
CALCOCO2-212ENST00000509014 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
CALCOCO2-212ENST00000509014 WNT2BQ93097 391 aa10.31□□□□□ -0.76
CALCOCO2-212ENST00000509014 LRCH3Q96II8 777 aa10.31□□□□□ -0.76
CALCOCO2-212ENST00000509014 SLC10A3P09131 477 aa10.3□□□□□ -0.76
CALCOCO2-212ENST00000509014 BCAMP50895 628 aa10.3□□□□□ -0.76
CALCOCO2-212ENST00000509014 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.3□□□□□ -0.76
CALCOCO2-212ENST00000509014 DDX11L8A8MPP1 907 aa10.29□□□□□ -0.76
CALCOCO2-212ENST00000509014 SSTR3P32745 418 aaPredicted RBP10.29□□□□□ -0.76
CALCOCO2-212ENST00000509014 NESP48681 1621 aa10.29□□□□□ -0.76
CALCOCO2-212ENST00000509014 CD46P15529 392 aa10.28□□□□□ -0.76
CALCOCO2-212ENST00000509014 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-212ENST00000509014 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
CALCOCO2-212ENST00000509014 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
CALCOCO2-212ENST00000509014 THOC2Q8NI27 1593 aaKnown RBP10.27□□□□□ -0.76
CALCOCO2-212ENST00000509014 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
CALCOCO2-212ENST00000509014 RNF40O75150 1001 aa10.26□□□□□ -0.77
CALCOCO2-212ENST00000509014 FAM117AQ9C073 453 aa10.26□□□□□ -0.77
CALCOCO2-212ENST00000509014 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
CALCOCO2-212ENST00000509014 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
CALCOCO2-212ENST00000509014 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
CALCOCO2-212ENST00000509014 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
CALCOCO2-212ENST00000509014 BEGAINQ9BUH8 593 aa10.23□□□□□ -0.77
CALCOCO2-212ENST00000509014 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
CALCOCO2-212ENST00000509014 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
CALCOCO2-212ENST00000509014 WBP1LQ9NX94 342 aa10.22□□□□□ -0.77
CALCOCO2-212ENST00000509014 HMGXB3Q12766 1538 aa10.22□□□□□ -0.77
CALCOCO2-212ENST00000509014 CFHP08603 1231 aa10.21□□□□□ -0.77
CALCOCO2-212ENST00000509014 GCGRP47871 477 aa10.21□□□□□ -0.77
CALCOCO2-212ENST00000509014 KIF21AQ7Z4S6 1674 aa10.2□□□□□ -0.78
CALCOCO2-212ENST00000509014 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 PPP4CP60510 307 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 RSPH4AQ5TD94 716 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 IFFO2Q5TF58 517 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
CALCOCO2-212ENST00000509014 SMARCA4P51532 1647 aa10.18□□□□□ -0.78
CALCOCO2-212ENST00000509014 APLP1P51693 650 aa10.18□□□□□ -0.78
CALCOCO2-212ENST00000509014 RGS20O76081 388 aa10.17□□□□□ -0.78
CALCOCO2-212ENST00000509014 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
CALCOCO2-212ENST00000509014 A0A0G2JS52 829 aa10.16□□□□□ -0.78
CALCOCO2-212ENST00000509014 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
CALCOCO2-212ENST00000509014 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
CALCOCO2-212ENST00000509014 KDM4AO75164 1064 aa10.15□□□□□ -0.78
CALCOCO2-212ENST00000509014 TBC1D2Q9BYX2 928 aa10.15□□□□□ -0.78
CALCOCO2-212ENST00000509014 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
CALCOCO2-212ENST00000509014 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
CALCOCO2-212ENST00000509014 FUT2Q10981 343 aa10.14□□□□□ -0.79
CALCOCO2-212ENST00000509014 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
CALCOCO2-212ENST00000509014 HOXA2O43364 376 aa10.12□□□□□ -0.79
CALCOCO2-212ENST00000509014 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
CALCOCO2-212ENST00000509014 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
CALCOCO2-212ENST00000509014 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
CALCOCO2-212ENST00000509014 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
CALCOCO2-212ENST00000509014 USP46P62068 366 aa10.11□□□□□ -0.79
CALCOCO2-212ENST00000509014 HLA-CQ95604 372 aa10.11□□□□□ -0.79
CALCOCO2-212ENST00000509014 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
CALCOCO2-212ENST00000509014 MOXD2PA6NHM9 499 aa10.1□□□□□ -0.79
CALCOCO2-212ENST00000509014 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
CALCOCO2-212ENST00000509014 DIXDC1Q155Q3 683 aa10.09□□□□□ -0.79
CALCOCO2-212ENST00000509014 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
CALCOCO2-212ENST00000509014 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
CALCOCO2-212ENST00000509014 NDUFV2P19404 249 aa10.08□□□□□ -0.8
CALCOCO2-212ENST00000509014 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
CALCOCO2-212ENST00000509014 GUCA2AQ02747 115 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms