RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 NRXN1Q9ULB1 1477 aa9.02□□□□□ -0.96
RACK1-220ENST00000508963 KDM5AP29375 1690 aaKnown RBP9.02□□□□□ -0.97
RACK1-220ENST00000508963 HDGFP51858 240 aaKnown RBP9.02□□□□□ -0.97
RACK1-220ENST00000508963 NUTM2DQ5VT03 806 aaPredicted RBP9.02□□□□□ -0.97
RACK1-220ENST00000508963 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.02□□□□□ -0.97
RACK1-220ENST00000508963 KIF1BO60333 1816 aa9.02□□□□□ -0.97
RACK1-220ENST00000508963 SLIT1O75093 1534 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 NEXMIFQ5QGS0 1516 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 TXNDC2Q86VQ3 553 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 PRAG1Q86YV5 1406 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 UBR1Q8IWV7 1749 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 C14orf93Q9H972 538 aaKnown RBP9.01□□□□□ -0.97
RACK1-220ENST00000508963 RIMS2Q9UQ26 1411 aa9.01□□□□□ -0.97
RACK1-220ENST00000508963 CEP170BQ9Y4F5 1589 aaPredicted RBP9□□□□□ -0.97
RACK1-220ENST00000508963 NBPF1Q3BBV0 1214 aa9□□□□□ -0.97
RACK1-220ENST00000508963 MYO3AQ8NEV4 1616 aa9□□□□□ -0.97
RACK1-220ENST00000508963 MYOM2P54296 1465 aa9□□□□□ -0.97
RACK1-220ENST00000508963 CFAP70Q5T0N1 1121 aa8.99□□□□□ -0.97
RACK1-220ENST00000508963 ANKLE2Q86XL3 938 aa8.99□□□□□ -0.97
RACK1-220ENST00000508963 MYO5BQ9ULV0 1848 aa8.98□□□□□ -0.97
RACK1-220ENST00000508963 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
RACK1-220ENST00000508963 HSPA2P54652 639 aa8.98□□□□□ -0.97
RACK1-220ENST00000508963 EID1Q9Y6B2 187 aa8.98□□□□□ -0.97
RACK1-220ENST00000508963 ZNF142P52746 1687 aaPredicted RBP8.97□□□□□ -0.97
RACK1-220ENST00000508963 PIK3C2GO75747 1445 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 IFT172Q9UG01 1749 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 MED14O60244 1454 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 PPLO60437 1756 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 TBX22Q9Y458 520 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 GPRASP1Q5JY77 1395 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 PLEKHG1Q9ULL1 1385 aa8.97□□□□□ -0.97
RACK1-220ENST00000508963 ADAMTS13Q76LX8 1427 aa8.96□□□□□ -0.98
RACK1-220ENST00000508963 TMEM132EQ6IEE7 984 aa8.95□□□□□ -0.98
RACK1-220ENST00000508963 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
RACK1-220ENST00000508963 SLC26A8Q96RN1 970 aa8.94□□□□□ -0.98
RACK1-220ENST00000508963 RALGAPBQ86X10 1494 aa8.94□□□□□ -0.98
RACK1-220ENST00000508963 SENP3Q9H4L4 574 aaPredicted RBP8.93□□□□□ -0.98
RACK1-220ENST00000508963 METP08581 1390 aa8.93□□□□□ -0.98
RACK1-220ENST00000508963 SETBP1Q9Y6X0 1596 aa8.93□□□□□ -0.98
RACK1-220ENST00000508963 ALKQ9UM73 1620 aa8.93□□□□□ -0.98
RACK1-220ENST00000508963 NRXN3Q9Y4C0 1643 aa8.93□□□□□ -0.98
RACK1-220ENST00000508963 TRPM1Q7Z4N2 1603 aa8.92□□□□□ -0.98
RACK1-220ENST00000508963 ADGRB1O14514 1584 aa8.92□□□□□ -0.98
RACK1-220ENST00000508963 SIRT1Q96EB6 747 aa8.92□□□□□ -0.98
RACK1-220ENST00000508963 CARD11Q9BXL7 1154 aa8.92□□□□□ -0.98
RACK1-220ENST00000508963 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
RACK1-220ENST00000508963 ROCK2O75116 1388 aaKnown RBP8.91□□□□□ -0.98
RACK1-220ENST00000508963 ABCC11Q96J66 1382 aa8.91□□□□□ -0.98
RACK1-220ENST00000508963 KIAA1210Q9ULL0 1709 aa8.91□□□□□ -0.98
RACK1-220ENST00000508963 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.98
RACK1-220ENST00000508963 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
RACK1-220ENST00000508963 HSPA5P11021 654 aaKnown RBP8.9□□□□□ -0.98
RACK1-220ENST00000508963 STRCQ7RTU9 1775 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 LRPPRCP42704 1394 aaKnown RBP8.89□□□□□ -0.99
RACK1-220ENST00000508963 PIK3R4Q99570 1358 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 ST20-MTHFSA0A0A6YYL1 179 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
RACK1-220ENST00000508963 BCANQ96GW7 911 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 TESK2Q96S53 571 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 TRAK1Q9UPV9 953 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
RACK1-220ENST00000508963 YTHDC2Q9H6S0 1430 aaKnown RBP8.88□□□□□ -0.99
RACK1-220ENST00000508963 SETD1AO15047 1707 aaKnown RBP8.88□□□□□ -0.99
RACK1-220ENST00000508963 KCNA6P17658 529 aa8.88□□□□□ -0.99
RACK1-220ENST00000508963 STK26Q9P289 416 aa8.88□□□□□ -0.99
RACK1-220ENST00000508963 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
RACK1-220ENST00000508963 AEBP2Q6ZN18 517 aaPredicted RBP8.87□□□□□ -0.99
RACK1-220ENST00000508963 HIRIP3Q9BW71 556 aaPredicted RBP8.87□□□□□ -0.99
RACK1-220ENST00000508963 DMRT2Q9Y5R5 561 aa8.87□□□□□ -0.99
RACK1-220ENST00000508963 IQGAP1P46940 1657 aa8.87□□□□□ -0.99
RACK1-220ENST00000508963 TECPR2O15040 1411 aa8.87□□□□□ -0.99
RACK1-220ENST00000508963 LAMC1P11047 1609 aa8.87□□□□□ -0.99
RACK1-220ENST00000508963 USP47Q96K76 1375 aa8.86□□□□□ -0.99
RACK1-220ENST00000508963 WAPLQ7Z5K2 1190 aa8.86□□□□□ -0.99
RACK1-220ENST00000508963 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
RACK1-220ENST00000508963 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
RACK1-220ENST00000508963 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
RACK1-220ENST00000508963 FAM135BQ49AJ0 1406 aa8.85□□□□□ -0.99
RACK1-220ENST00000508963 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
RACK1-220ENST00000508963 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
RACK1-220ENST00000508963 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
RACK1-220ENST00000508963 PLEKHH1Q9ULM0 1364 aa8.84□□□□□ -0.99
RACK1-220ENST00000508963 CENPJQ9HC77 1338 aaPredicted RBP8.83□□□□□ -1
RACK1-220ENST00000508963 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
RACK1-220ENST00000508963 CHD2O14647 1828 aaKnown RBP8.82□□□□□ -1
RACK1-220ENST00000508963 SLC24A1O60721 1099 aa8.82□□□□□ -1
RACK1-220ENST00000508963 ZNF335Q9H4Z2 1342 aaPredicted RBP8.81□□□□□ -1
RACK1-220ENST00000508963 PTCH1Q13635 1447 aa8.81□□□□□ -1
RACK1-220ENST00000508963 PUS7Q96PZ0 661 aaKnown RBP8.81□□□□□ -1
RACK1-220ENST00000508963 POGKQ9P215 609 aa8.81□□□□□ -1
RACK1-220ENST00000508963 WASHC2AQ641Q2 1341 aa8.8□□□□□ -1
RACK1-220ENST00000508963 CPS1P31327 1500 aa8.8□□□□□ -1
RACK1-220ENST00000508963 XRN1Q8IZH2 1706 aaKnown RBP8.8□□□□□ -1
RACK1-220ENST00000508963 SAFB2Q14151 953 aaKnown RBP eCLIP8.8□□□□□ -1
RACK1-220ENST00000508963 PROSER2Q86WR7 435 aaPredicted RBP8.8□□□□□ -1
RACK1-220ENST00000508963 RBM33Q96EV2 1170 aaKnown RBP8.8□□□□□ -1
RACK1-220ENST00000508963 EIF3AQ14152 1382 aaKnown RBP8.8□□□□□ -1
RACK1-220ENST00000508963 NWD1Q149M9 1564 aa8.79□□□□□ -1
RACK1-220ENST00000508963 DISP3Q9P2K9 1392 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms