RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
TRIM60-203ENST00000508504 PPLO60437 1756 aa25.2■■□□□ 1.62
TRIM60-203ENST00000508504 ZFYVE9O95405 1425 aa25.19■■□□□ 1.62
TRIM60-203ENST00000508504 HSPA2P54652 639 aa25.19■■□□□ 1.62
TRIM60-203ENST00000508504 RIMS2Q9UQ26 1411 aa25.18■■□□□ 1.62
TRIM60-203ENST00000508504 LTKP29376 864 aa25.17■■□□□ 1.62
TRIM60-203ENST00000508504 ARHGAP23Q9P227 1491 aa25.16■■□□□ 1.62
TRIM60-203ENST00000508504 ADGRF5Q8IZF2 1346 aa25.16■■□□□ 1.62
TRIM60-203ENST00000508504 TIMELESSQ9UNS1 1208 aa25.16■■□□□ 1.62
TRIM60-203ENST00000508504 SLIT1O75093 1534 aa25.16■■□□□ 1.62
TRIM60-203ENST00000508504 RPGRIP1LQ68CZ1 1315 aa25.15■■□□□ 1.62
TRIM60-203ENST00000508504 PPP1R15AO75807 674 aaPredicted RBP25.13■■□□□ 1.61
TRIM60-203ENST00000508504 NBPF8Q3BBV2 869 aa25.12■■□□□ 1.61
TRIM60-203ENST00000508504 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
TRIM60-203ENST00000508504 MYOM2P54296 1465 aa25.1■■□□□ 1.61
TRIM60-203ENST00000508504 PRAG1Q86YV5 1406 aa25.08■■□□□ 1.61
TRIM60-203ENST00000508504 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
TRIM60-203ENST00000508504 NRXN1Q9ULB1 1477 aa25.08■■□□□ 1.6
TRIM60-203ENST00000508504 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
TRIM60-203ENST00000508504 EID1Q9Y6B2 187 aa25.07■■□□□ 1.6
TRIM60-203ENST00000508504 NCKAP5LQ9HCH0 1330 aa25.07■■□□□ 1.6
TRIM60-203ENST00000508504 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.6
TRIM60-203ENST00000508504 ANKLE2Q86XL3 938 aa25.05■■□□□ 1.6
TRIM60-203ENST00000508504 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
TRIM60-203ENST00000508504 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
TRIM60-203ENST00000508504 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
TRIM60-203ENST00000508504 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
TRIM60-203ENST00000508504 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
TRIM60-203ENST00000508504 NRXN3Q9Y4C0 1643 aa25.02■■□□□ 1.6
TRIM60-203ENST00000508504 CFAP70Q5T0N1 1121 aa25.01■■□□□ 1.59
TRIM60-203ENST00000508504 POLR1AO95602 1720 aaPredicted RBP25.01■■□□□ 1.59
TRIM60-203ENST00000508504 PLEKHG1Q9ULL1 1385 aa25■■□□□ 1.59
TRIM60-203ENST00000508504 IQGAP1P46940 1657 aa25■■□□□ 1.59
TRIM60-203ENST00000508504 STRCQ7RTU9 1775 aa24.99■■□□□ 1.59
TRIM60-203ENST00000508504 NBPF1Q3BBV0 1214 aa24.98■■□□□ 1.59
TRIM60-203ENST00000508504 BCANQ96GW7 911 aa24.98■■□□□ 1.59
TRIM60-203ENST00000508504 SLC26A8Q96RN1 970 aa24.97■■□□□ 1.59
TRIM60-203ENST00000508504 SETBP1Q9Y6X0 1596 aa24.97■■□□□ 1.59
TRIM60-203ENST00000508504 ADAMTS13Q76LX8 1427 aa24.97■■□□□ 1.59
TRIM60-203ENST00000508504 TRPM1Q7Z4N2 1603 aa24.96■■□□□ 1.59
TRIM60-203ENST00000508504 C14orf93Q9H972 538 aaKnown RBP24.96■■□□□ 1.59
TRIM60-203ENST00000508504 ALKQ9UM73 1620 aa24.95■■□□□ 1.59
TRIM60-203ENST00000508504 MED14O60244 1454 aa24.95■■□□□ 1.58
TRIM60-203ENST00000508504 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
TRIM60-203ENST00000508504 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
TRIM60-203ENST00000508504 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
TRIM60-203ENST00000508504 RALGAPBQ86X10 1494 aa24.92■■□□□ 1.58
TRIM60-203ENST00000508504 ASXL1Q8IXJ9 1541 aa24.92■■□□□ 1.58
TRIM60-203ENST00000508504 METP08581 1390 aa24.91■■□□□ 1.58
TRIM60-203ENST00000508504 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
TRIM60-203ENST00000508504 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.58
TRIM60-203ENST00000508504 ADGRB1O14514 1584 aa24.89■■□□□ 1.57
TRIM60-203ENST00000508504 LAMC1P11047 1609 aa24.87■■□□□ 1.57
TRIM60-203ENST00000508504 TBX22Q9Y458 520 aa24.85■■□□□ 1.57
TRIM60-203ENST00000508504 GPRASP1Q5JY77 1395 aa24.85■■□□□ 1.57
TRIM60-203ENST00000508504 CARD11Q9BXL7 1154 aa24.84■■□□□ 1.57
TRIM60-203ENST00000508504 DIP2AQ14689 1571 aa24.82■■□□□ 1.56
TRIM60-203ENST00000508504 PTPRUQ92729 1446 aa24.82■■□□□ 1.56
TRIM60-203ENST00000508504 STK26Q9P289 416 aa24.81■■□□□ 1.56
TRIM60-203ENST00000508504 YTHDC2Q9H6S0 1430 aaKnown RBP24.79■■□□□ 1.56
TRIM60-203ENST00000508504 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
TRIM60-203ENST00000508504 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
TRIM60-203ENST00000508504 AMOTL2Q9Y2J4 779 aa24.75■■□□□ 1.55
TRIM60-203ENST00000508504 CHD2O14647 1828 aaKnown RBP24.74■■□□□ 1.55
TRIM60-203ENST00000508504 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
TRIM60-203ENST00000508504 USP47Q96K76 1375 aa24.73■■□□□ 1.55
TRIM60-203ENST00000508504 KCNA6P17658 529 aa24.72■■□□□ 1.55
TRIM60-203ENST00000508504 PIK3R4Q99570 1358 aa24.72■■□□□ 1.55
TRIM60-203ENST00000508504 STRCP1A6NGW2 1772 aa24.71■■□□□ 1.55
TRIM60-203ENST00000508504 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
TRIM60-203ENST00000508504 XRN1Q8IZH2 1706 aaKnown RBP24.71■■□□□ 1.55
TRIM60-203ENST00000508504 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
TRIM60-203ENST00000508504 ROBO2Q9HCK4 1378 aa24.7■■□□□ 1.55
TRIM60-203ENST00000508504 ARHGEF28Q8N1W1 1705 aaKnown RBP24.7■■□□□ 1.54
TRIM60-203ENST00000508504 ZNF335Q9H4Z2 1342 aaPredicted RBP24.7■■□□□ 1.54
TRIM60-203ENST00000508504 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
TRIM60-203ENST00000508504 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
TRIM60-203ENST00000508504 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
TRIM60-203ENST00000508504 TECPR2O15040 1411 aa24.68■■□□□ 1.54
TRIM60-203ENST00000508504 ST20-MTHFSA0A0A6YYL1 179 aa24.68■■□□□ 1.54
TRIM60-203ENST00000508504 KNDC1Q76NI1 1749 aa24.67■■□□□ 1.54
TRIM60-203ENST00000508504 SAFB2Q14151 953 aaKnown RBP eCLIP24.67■■□□□ 1.54
TRIM60-203ENST00000508504 RBM33Q96EV2 1170 aaKnown RBP24.67■■□□□ 1.54
TRIM60-203ENST00000508504 PRAM1Q96QH2 718 aa24.67■■□□□ 1.54
TRIM60-203ENST00000508504 EIF4G2P78344 907 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRIM60-203ENST00000508504 CPS1P31327 1500 aa24.66■■□□□ 1.54
TRIM60-203ENST00000508504 NWD1Q149M9 1564 aa24.66■■□□□ 1.54
TRIM60-203ENST00000508504 DLC1Q96QB1 1528 aa24.64■■□□□ 1.54
TRIM60-203ENST00000508504 PTCH1Q13635 1447 aa24.62■■□□□ 1.53
TRIM60-203ENST00000508504 CENPJQ9HC77 1338 aaPredicted RBP24.61■■□□□ 1.53
TRIM60-203ENST00000508504 EIF3AQ14152 1382 aaKnown RBP24.61■■□□□ 1.53
TRIM60-203ENST00000508504 TESK2Q96S53 571 aa24.6■■□□□ 1.53
TRIM60-203ENST00000508504 POGKQ9P215 609 aa24.6■■□□□ 1.53
TRIM60-203ENST00000508504 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
TRIM60-203ENST00000508504 QRICH2Q9H0J4 1663 aa24.58■■□□□ 1.53
TRIM60-203ENST00000508504 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
TRIM60-203ENST00000508504 NKTRP30414 1462 aaKnown RBP24.57■■□□□ 1.52
TRIM60-203ENST00000508504 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.56■■□□□ 1.52
TRIM60-203ENST00000508504 MINK1Q8N4C8 1332 aaPredicted RBP24.56■■□□□ 1.52
TRIM60-203ENST00000508504 PROSER2Q86WR7 435 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms