RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 SLC19A1P41440 591 aa12.09□□□□□ -0.47
LINC02428-201ENST00000508099 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
LINC02428-201ENST00000508099 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
LINC02428-201ENST00000508099 TMEM134Q9H6X4 195 aa12.08□□□□□ -0.48
LINC02428-201ENST00000508099 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
LINC02428-201ENST00000508099 PTGDRQ13258 359 aa12.07□□□□□ -0.48
LINC02428-201ENST00000508099 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
LINC02428-201ENST00000508099 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
LINC02428-201ENST00000508099 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
LINC02428-201ENST00000508099 TLL1O43897 1013 aa12.05□□□□□ -0.48
LINC02428-201ENST00000508099 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
LINC02428-201ENST00000508099 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
LINC02428-201ENST00000508099 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
LINC02428-201ENST00000508099 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
LINC02428-201ENST00000508099 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
LINC02428-201ENST00000508099 PRR20EP86478 221 aa12.02□□□□□ -0.49
LINC02428-201ENST00000508099 PRR20CP86479 221 aa12.02□□□□□ -0.49
LINC02428-201ENST00000508099 PRR20DP86480 221 aa12.02□□□□□ -0.49
LINC02428-201ENST00000508099 PRR20BP86481 221 aa12.02□□□□□ -0.49
LINC02428-201ENST00000508099 PRR20AP86496 221 aa12.02□□□□□ -0.49
LINC02428-201ENST00000508099 CFHP08603 1231 aa12.01□□□□□ -0.49
LINC02428-201ENST00000508099 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
LINC02428-201ENST00000508099 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
LINC02428-201ENST00000508099 RCCD1A6NED2 376 aa12□□□□□ -0.49
LINC02428-201ENST00000508099 DGAT1O75907 488 aa12□□□□□ -0.49
LINC02428-201ENST00000508099 S1PR4O95977 384 aa12□□□□□ -0.49
LINC02428-201ENST00000508099 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
LINC02428-201ENST00000508099 ZNF775Q96BV0 537 aaPredicted RBP11.99□□□□□ -0.49
LINC02428-201ENST00000508099 ADH1BP00325 375 aa11.98□□□□□ -0.49
LINC02428-201ENST00000508099 NR1I2O75469 434 aa11.97□□□□□ -0.49
LINC02428-201ENST00000508099 MYT1Q01538 1121 aa11.97□□□□□ -0.49
LINC02428-201ENST00000508099 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
LINC02428-201ENST00000508099 PPEF1O14829 653 aaPredicted RBP11.96□□□□□ -0.49
LINC02428-201ENST00000508099 ZNF697Q5TEC3 545 aa11.96□□□□□ -0.49
LINC02428-201ENST00000508099 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
LINC02428-201ENST00000508099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
LINC02428-201ENST00000508099 SLC10A3P09131 477 aa11.94□□□□□ -0.5
LINC02428-201ENST00000508099 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
LINC02428-201ENST00000508099 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
LINC02428-201ENST00000508099 FCHSD2O94868 740 aa11.93□□□□□ -0.5
LINC02428-201ENST00000508099 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
LINC02428-201ENST00000508099 GDF9O60383 454 aa11.92□□□□□ -0.5
LINC02428-201ENST00000508099 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
LINC02428-201ENST00000508099 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
LINC02428-201ENST00000508099 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
LINC02428-201ENST00000508099 OATP04181 439 aa11.89□□□□□ -0.51
LINC02428-201ENST00000508099 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
LINC02428-201ENST00000508099 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
LINC02428-201ENST00000508099 RSPH4AQ5TD94 716 aa11.87□□□□□ -0.51
LINC02428-201ENST00000508099 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
LINC02428-201ENST00000508099 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
LINC02428-201ENST00000508099 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
LINC02428-201ENST00000508099 POTECB2RU33 542 aa11.84□□□□□ -0.51
LINC02428-201ENST00000508099 SPSB2Q99619 263 aa11.83□□□□□ -0.52
LINC02428-201ENST00000508099 HIC1Q14526 733 aa11.82□□□□□ -0.52
LINC02428-201ENST00000508099 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
LINC02428-201ENST00000508099 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
LINC02428-201ENST00000508099 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
LINC02428-201ENST00000508099 AAASQ9NRG9 546 aa11.8□□□□□ -0.52
LINC02428-201ENST00000508099 PKD2L1Q9P0L9 805 aa11.8□□□□□ -0.52
LINC02428-201ENST00000508099 SEMA3EO15041 775 aa11.79□□□□□ -0.52
LINC02428-201ENST00000508099 ST8SIA5O15466 376 aa11.79□□□□□ -0.52
LINC02428-201ENST00000508099 RPIAP49247 311 aa11.79□□□□□ -0.52
LINC02428-201ENST00000508099 FOXC1Q12948 553 aa11.77□□□□□ -0.53
LINC02428-201ENST00000508099 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
LINC02428-201ENST00000508099 MORN1Q5T089 497 aa11.75□□□□□ -0.53
LINC02428-201ENST00000508099 DAXXQ9UER7 740 aaPredicted RBP11.75□□□□□ -0.53
LINC02428-201ENST00000508099 RDH13Q8NBN7 331 aa11.74□□□□□ -0.53
LINC02428-201ENST00000508099 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
LINC02428-201ENST00000508099 CD2BP2O95400 341 aaKnown RBP11.73□□□□□ -0.53
LINC02428-201ENST00000508099 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
LINC02428-201ENST00000508099 THAP11Q96EK4 314 aa11.73□□□□□ -0.53
LINC02428-201ENST00000508099 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
LINC02428-201ENST00000508099 TOR4AQ9NXH8 423 aa11.72□□□□□ -0.53
LINC02428-201ENST00000508099 GNPATO15228 680 aa11.71□□□□□ -0.53
LINC02428-201ENST00000508099 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
LINC02428-201ENST00000508099 AVPP01185 164 aa11.71□□□□□ -0.53
LINC02428-201ENST00000508099 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
LINC02428-201ENST00000508099 FUT2Q10981 343 aa11.71□□□□□ -0.53
LINC02428-201ENST00000508099 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
LINC02428-201ENST00000508099 LCE2AQ5TA79 106 aaPredicted RBP11.69□□□□□ -0.54
LINC02428-201ENST00000508099 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
LINC02428-201ENST00000508099 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
LINC02428-201ENST00000508099 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
LINC02428-201ENST00000508099 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
LINC02428-201ENST00000508099 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
LINC02428-201ENST00000508099 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
LINC02428-201ENST00000508099 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
LINC02428-201ENST00000508099 AXIN1O15169 862 aa11.67□□□□□ -0.54
LINC02428-201ENST00000508099 FECHP22830 423 aa11.67□□□□□ -0.54
LINC02428-201ENST00000508099 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
LINC02428-201ENST00000508099 SULF1Q8IWU6 871 aa11.67□□□□□ -0.54
LINC02428-201ENST00000508099 GCGRP47871 477 aa11.66□□□□□ -0.54
LINC02428-201ENST00000508099 GPR37O15354 613 aa11.65□□□□□ -0.54
LINC02428-201ENST00000508099 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
LINC02428-201ENST00000508099 DACH1Q9UI36 760 aa11.65□□□□□ -0.54
LINC02428-201ENST00000508099 MSS51Q4VC12 460 aa11.64□□□□□ -0.55
LINC02428-201ENST00000508099 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
LINC02428-201ENST00000508099 PRDM9Q9NQV7 894 aa11.64□□□□□ -0.55
LINC02428-201ENST00000508099 ZBTB24O43167 697 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms