RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
SPCS3-202ENST00000507001 LCE2BO14633 110 aa11.29□□□□□ -0.6
SPCS3-202ENST00000507001 COPS2P61201 443 aa11.29□□□□□ -0.6
SPCS3-202ENST00000507001 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
SPCS3-202ENST00000507001 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
SPCS3-202ENST00000507001 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
SPCS3-202ENST00000507001 BCANQ96GW7 911 aa11.28□□□□□ -0.6
SPCS3-202ENST00000507001 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
SPCS3-202ENST00000507001 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
SPCS3-202ENST00000507001 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.61
SPCS3-202ENST00000507001 ACTN4O43707 911 aaKnown RBP11.22□□□□□ -0.61
SPCS3-202ENST00000507001 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
SPCS3-202ENST00000507001 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
SPCS3-202ENST00000507001 FCHSD2O94868 740 aa11.21□□□□□ -0.61
SPCS3-202ENST00000507001 KMT5BQ4FZB7 885 aa11.21□□□□□ -0.61
SPCS3-202ENST00000507001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.2□□□□□ -0.62
SPCS3-202ENST00000507001 PDZRN3Q9UPQ7 1066 aa11.2□□□□□ -0.62
SPCS3-202ENST00000507001 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
SPCS3-202ENST00000507001 RNF223E7ERA6 249 aa11.18□□□□□ -0.62
SPCS3-202ENST00000507001 OATP04181 439 aa11.16□□□□□ -0.62
SPCS3-202ENST00000507001 CFHP08603 1231 aa11.16□□□□□ -0.62
SPCS3-202ENST00000507001 ANKLE1Q8NAG6 615 aa11.16□□□□□ -0.62
SPCS3-202ENST00000507001 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
SPCS3-202ENST00000507001 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SPCS3-202ENST00000507001 TLL1O43897 1013 aa11.14□□□□□ -0.63
SPCS3-202ENST00000507001 SLC10A3P09131 477 aa11.14□□□□□ -0.63
SPCS3-202ENST00000507001 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
SPCS3-202ENST00000507001 SLC19A1P41440 591 aa11.14□□□□□ -0.63
SPCS3-202ENST00000507001 HIC1Q14526 733 aa11.13□□□□□ -0.63
SPCS3-202ENST00000507001 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
SPCS3-202ENST00000507001 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
SPCS3-202ENST00000507001 NR1I2O75469 434 aa11.12□□□□□ -0.63
SPCS3-202ENST00000507001 ADH1BP00325 375 aa11.11□□□□□ -0.63
SPCS3-202ENST00000507001 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
SPCS3-202ENST00000507001 TRIM67Q6ZTA4 783 aa11.11□□□□□ -0.63
SPCS3-202ENST00000507001 PRR20EP86478 221 aa11.1□□□□□ -0.63
SPCS3-202ENST00000507001 PRR20CP86479 221 aa11.1□□□□□ -0.63
SPCS3-202ENST00000507001 PRR20DP86480 221 aa11.1□□□□□ -0.63
SPCS3-202ENST00000507001 PRR20BP86481 221 aa11.1□□□□□ -0.63
SPCS3-202ENST00000507001 PRR20AP86496 221 aa11.1□□□□□ -0.63
SPCS3-202ENST00000507001 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
SPCS3-202ENST00000507001 S1PR4O95977 384 aa11.09□□□□□ -0.63
SPCS3-202ENST00000507001 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
SPCS3-202ENST00000507001 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
SPCS3-202ENST00000507001 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
SPCS3-202ENST00000507001 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
SPCS3-202ENST00000507001 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
SPCS3-202ENST00000507001 DGAT1O75907 488 aa11.04□□□□□ -0.64
SPCS3-202ENST00000507001 LIAT1Q6ZQX7 453 aa11.04□□□□□ -0.64
SPCS3-202ENST00000507001 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
SPCS3-202ENST00000507001 PPEF1O14829 653 aaPredicted RBP11.03□□□□□ -0.64
SPCS3-202ENST00000507001 GNPATO15228 680 aa11.03□□□□□ -0.64
SPCS3-202ENST00000507001 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
SPCS3-202ENST00000507001 GPR37O15354 613 aa11.02□□□□□ -0.65
SPCS3-202ENST00000507001 ZNF697Q5TEC3 545 aa11.02□□□□□ -0.65
SPCS3-202ENST00000507001 GDF9O60383 454 aa11.01□□□□□ -0.65
SPCS3-202ENST00000507001 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
SPCS3-202ENST00000507001 PKDCCQ504Y2 493 aa11.01□□□□□ -0.65
SPCS3-202ENST00000507001 RBM26Q5T8P6 1007 aaKnown RBP11.01□□□□□ -0.65
SPCS3-202ENST00000507001 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
SPCS3-202ENST00000507001 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
SPCS3-202ENST00000507001 SPSB2Q99619 263 aa10.99□□□□□ -0.65
SPCS3-202ENST00000507001 MYT1Q01538 1121 aa10.98□□□□□ -0.65
SPCS3-202ENST00000507001 PLA2G2CQ5R387 149 aa10.98□□□□□ -0.65
SPCS3-202ENST00000507001 FECHP22830 423 aa10.97□□□□□ -0.65
SPCS3-202ENST00000507001 PUS10Q3MIT2 529 aaKnown RBP10.97□□□□□ -0.65
SPCS3-202ENST00000507001 MORN1Q5T089 497 aa10.96□□□□□ -0.65
SPCS3-202ENST00000507001 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
SPCS3-202ENST00000507001 THAP11Q96EK4 314 aa10.95□□□□□ -0.66
SPCS3-202ENST00000507001 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
SPCS3-202ENST00000507001 RPIAP49247 311 aa10.94□□□□□ -0.66
SPCS3-202ENST00000507001 RDH13Q8NBN7 331 aa10.94□□□□□ -0.66
SPCS3-202ENST00000507001 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
SPCS3-202ENST00000507001 GCGRP47871 477 aa10.92□□□□□ -0.66
SPCS3-202ENST00000507001 FUT2Q10981 343 aa10.92□□□□□ -0.66
SPCS3-202ENST00000507001 FAM187AA6NFU0 413 aa10.91□□□□□ -0.66
SPCS3-202ENST00000507001 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
SPCS3-202ENST00000507001 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
SPCS3-202ENST00000507001 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
SPCS3-202ENST00000507001 FMNL1O95466 1100 aaPredicted RBP10.9□□□□□ -0.66
SPCS3-202ENST00000507001 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
SPCS3-202ENST00000507001 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
SPCS3-202ENST00000507001 SLC27A5Q9Y2P5 690 aa10.88□□□□□ -0.67
SPCS3-202ENST00000507001 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
SPCS3-202ENST00000507001 GPIHBP1Q8IV16 184 aa10.87□□□□□ -0.67
SPCS3-202ENST00000507001 CRIPAKQ8N1N5 446 aa10.87□□□□□ -0.67
SPCS3-202ENST00000507001 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
SPCS3-202ENST00000507001 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
SPCS3-202ENST00000507001 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
SPCS3-202ENST00000507001 GRIPAP1Q4V328 841 aa10.85□□□□□ -0.67
SPCS3-202ENST00000507001 BRICD5Q6PL45 260 aa10.85□□□□□ -0.67
SPCS3-202ENST00000507001 NLRP7Q8WX94 980 aa10.84□□□□□ -0.67
SPCS3-202ENST00000507001 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
SPCS3-202ENST00000507001 TOR4AQ9NXH8 423 aa10.84□□□□□ -0.67
SPCS3-202ENST00000507001 AVPP01185 164 aa10.83□□□□□ -0.68
SPCS3-202ENST00000507001 FOXC1Q12948 553 aa10.82□□□□□ -0.68
SPCS3-202ENST00000507001 POTECB2RU33 542 aa10.81□□□□□ -0.68
SPCS3-202ENST00000507001 Q3C1V9 767 aa10.8□□□□□ -0.68
SPCS3-202ENST00000507001 PRDM9Q9NQV7 894 aa10.8□□□□□ -0.68
SPCS3-202ENST00000507001 ST8SIA5O15466 376 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms