RNA–Protein interactions for RNA: ENST00000506089.1

SMARCAD1-205, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 4

Gene SMARCAD1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-205ENST00000506089 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
SMARCAD1-205ENST00000506089 TREML4Q6UXN2 200 aa8.94□□□□□ -0.98
SMARCAD1-205ENST00000506089 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
SMARCAD1-205ENST00000506089 FAM187AA6NFU0 413 aa8.93□□□□□ -0.98
SMARCAD1-205ENST00000506089 SPRYD7Q5W111 196 aa8.93□□□□□ -0.98
SMARCAD1-205ENST00000506089 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
SMARCAD1-205ENST00000506089 GRXCR2A6NFK2 248 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 ST8SIA5O15466 376 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 MLLT3P42568 568 aaPredicted RBP8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 PRR20EP86478 221 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 PRR20CP86479 221 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 PRR20DP86480 221 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 PRR20BP86481 221 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 PRR20AP86496 221 aa8.92□□□□□ -0.98
SMARCAD1-205ENST00000506089 ZNF598Q86UK7 904 aaKnown RBP8.91□□□□□ -0.98
SMARCAD1-205ENST00000506089 TNFRSF10AO00220 468 aa8.9□□□□□ -0.98
SMARCAD1-205ENST00000506089 TLL1O43897 1013 aa8.9□□□□□ -0.98
SMARCAD1-205ENST00000506089 SLF2Q8IX21 1173 aa8.9□□□□□ -0.98
SMARCAD1-205ENST00000506089 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
SMARCAD1-205ENST00000506089 SEMA3EO15041 775 aa8.89□□□□□ -0.99
SMARCAD1-205ENST00000506089 OSBPP22059 807 aa8.89□□□□□ -0.99
SMARCAD1-205ENST00000506089 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
SMARCAD1-205ENST00000506089 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
SMARCAD1-205ENST00000506089 PCDHB3Q9Y5E6 796 aa8.89□□□□□ -0.99
SMARCAD1-205ENST00000506089 PPEF1O14829 653 aaPredicted RBP8.88□□□□□ -0.99
SMARCAD1-205ENST00000506089 LIAT1Q6ZQX7 453 aa8.88□□□□□ -0.99
SMARCAD1-205ENST00000506089 RBM27Q9P2N5 1060 aaKnown RBP8.88□□□□□ -0.99
SMARCAD1-205ENST00000506089 ANKLE1Q8NAG6 615 aa8.87□□□□□ -0.99
SMARCAD1-205ENST00000506089 AAASQ9NRG9 546 aa8.87□□□□□ -0.99
SMARCAD1-205ENST00000506089 GDF9O60383 454 aa8.86□□□□□ -0.99
SMARCAD1-205ENST00000506089 S1PR4O95977 384 aa8.85□□□□□ -0.99
SMARCAD1-205ENST00000506089 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
SMARCAD1-205ENST00000506089 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
SMARCAD1-205ENST00000506089 TESPA1A2RU30 521 aaPredicted RBP8.82□□□□□ -1
SMARCAD1-205ENST00000506089 SLC4A3P48751 1232 aa8.81□□□□□ -1
SMARCAD1-205ENST00000506089 PRR14Q9BWN1 585 aa8.81□□□□□ -1
SMARCAD1-205ENST00000506089 DACH1Q9UI36 760 aa8.81□□□□□ -1
SMARCAD1-205ENST00000506089 WFS1O76024 890 aa8.8□□□□□ -1
SMARCAD1-205ENST00000506089 EYA1Q99502 592 aa8.8□□□□□ -1
SMARCAD1-205ENST00000506089 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
SMARCAD1-205ENST00000506089 PLA2G2CQ5R387 149 aa8.79□□□□□ -1
SMARCAD1-205ENST00000506089 STK17AQ9UEE5 414 aa8.78□□□□□ -1
SMARCAD1-205ENST00000506089 PKD2L1Q9P0L9 805 aa8.77□□□□□ -1.01
SMARCAD1-205ENST00000506089 FOXC1Q12948 553 aa8.76□□□□□ -1.01
SMARCAD1-205ENST00000506089 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
SMARCAD1-205ENST00000506089 GMPR2Q9P2T1 348 aaKnown RBP8.76□□□□□ -1.01
SMARCAD1-205ENST00000506089 NFX1Q12986 1120 aaKnown RBP8.75□□□□□ -1.01
SMARCAD1-205ENST00000506089 ADH1BP00325 375 aa8.74□□□□□ -1.01
SMARCAD1-205ENST00000506089 CRIPAKQ8N1N5 446 aa8.74□□□□□ -1.01
SMARCAD1-205ENST00000506089 C11orf95C9JLR9 678 aaPredicted RBP8.73□□□□□ -1.01
SMARCAD1-205ENST00000506089 ACTN4O43707 911 aaKnown RBP8.73□□□□□ -1.01
SMARCAD1-205ENST00000506089 WIPF1O43516 503 aa8.72□□□□□ -1.01
SMARCAD1-205ENST00000506089 CFHP08603 1231 aa8.71□□□□□ -1.02
SMARCAD1-205ENST00000506089 PTGDRQ13258 359 aa8.71□□□□□ -1.02
SMARCAD1-205ENST00000506089 SLC6A16Q9GZN6 736 aa8.71□□□□□ -1.02
SMARCAD1-205ENST00000506089 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
SMARCAD1-205ENST00000506089 DNAJB2P25686 324 aa8.7□□□□□ -1.02
SMARCAD1-205ENST00000506089 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
SMARCAD1-205ENST00000506089 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
SMARCAD1-205ENST00000506089 AXIN1O15169 862 aa8.69□□□□□ -1.02
SMARCAD1-205ENST00000506089 GPR37O15354 613 aa8.69□□□□□ -1.02
SMARCAD1-205ENST00000506089 AVPP01185 164 aa8.69□□□□□ -1.02
SMARCAD1-205ENST00000506089 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
SMARCAD1-205ENST00000506089 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
SMARCAD1-205ENST00000506089 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
SMARCAD1-205ENST00000506089 TOR4AQ9NXH8 423 aa8.68□□□□□ -1.02
SMARCAD1-205ENST00000506089 NR1I2O75469 434 aa8.67□□□□□ -1.02
SMARCAD1-205ENST00000506089 SMYD5Q6GMV2 418 aa8.67□□□□□ -1.02
SMARCAD1-205ENST00000506089 SLC10A3P09131 477 aa8.65□□□□□ -1.02
SMARCAD1-205ENST00000506089 FECHP22830 423 aa8.65□□□□□ -1.02
SMARCAD1-205ENST00000506089 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
SMARCAD1-205ENST00000506089 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 RCCD1A6NED2 376 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 RBM46Q8TBY0 533 aaKnown RBP8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
SMARCAD1-205ENST00000506089 FCHSD2O94868 740 aa8.62□□□□□ -1.03
SMARCAD1-205ENST00000506089 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
SMARCAD1-205ENST00000506089 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
SMARCAD1-205ENST00000506089 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
SMARCAD1-205ENST00000506089 RPIAP49247 311 aa8.61□□□□□ -1.03
SMARCAD1-205ENST00000506089 PUS10Q3MIT2 529 aaKnown RBP8.61□□□□□ -1.03
SMARCAD1-205ENST00000506089 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
SMARCAD1-205ENST00000506089 SPSB2Q99619 263 aa8.61□□□□□ -1.03
SMARCAD1-205ENST00000506089 TERTO14746 1132 aaKnown RBP8.6□□□□□ -1.03
SMARCAD1-205ENST00000506089 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
SMARCAD1-205ENST00000506089 HIC1Q14526 733 aa8.6□□□□□ -1.03
SMARCAD1-205ENST00000506089 FCF1Q9Y324 198 aaKnown RBP8.6□□□□□ -1.03
SMARCAD1-205ENST00000506089 GNPATO15228 680 aa8.58□□□□□ -1.04
SMARCAD1-205ENST00000506089 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
SMARCAD1-205ENST00000506089 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
SMARCAD1-205ENST00000506089 TTC24A2A3L6 582 aaPredicted RBP8.56□□□□□ -1.04
SMARCAD1-205ENST00000506089 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
SMARCAD1-205ENST00000506089 SMPD1P17405 629 aa8.54□□□□□ -1.04
SMARCAD1-205ENST00000506089 TRIM47Q96LD4 638 aa8.54□□□□□ -1.04
SMARCAD1-205ENST00000506089 PXYLP1Q8TE99 480 aa8.53□□□□□ -1.04
SMARCAD1-205ENST00000506089 PHOX2BQ99453 314 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms