RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 BCANQ96GW7 911 aa15.78■□□□□ 0.12
NR1I3-222ENST00000506018 PPP1R15AO75807 674 aaPredicted RBP15.76■□□□□ 0.11
NR1I3-222ENST00000506018 PIP4K2BP78356 416 aa15.76■□□□□ 0.11
NR1I3-222ENST00000506018 LRRC7Q96NW7 1537 aa15.76■□□□□ 0.11
NR1I3-222ENST00000506018 CHGAP10645 457 aaKnown RBP15.75■□□□□ 0.11
NR1I3-222ENST00000506018 TMEM131LA2VDJ0 1609 aa15.75■□□□□ 0.11
NR1I3-222ENST00000506018 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.75■□□□□ 0.11
NR1I3-222ENST00000506018 DISP3Q9P2K9 1392 aa15.74■□□□□ 0.11
NR1I3-222ENST00000506018 SPHKAPQ2M3C7 1700 aa15.74■□□□□ 0.11
NR1I3-222ENST00000506018 RIMS2Q9UQ26 1411 aa15.72■□□□□ 0.11
NR1I3-222ENST00000506018 PLEKHG1Q9ULL1 1385 aa15.71■□□□□ 0.11
NR1I3-222ENST00000506018 KCNA6P17658 529 aa15.71■□□□□ 0.11
NR1I3-222ENST00000506018 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
NR1I3-222ENST00000506018 ZFYVE9O95405 1425 aa15.71■□□□□ 0.1
NR1I3-222ENST00000506018 XIRP1Q702N8 1843 aaKnown RBP15.7■□□□□ 0.1
NR1I3-222ENST00000506018 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
NR1I3-222ENST00000506018 NAIPQ13075 1403 aa15.68■□□□□ 0.1
NR1I3-222ENST00000506018 CHD2O14647 1828 aaKnown RBP15.68■□□□□ 0.1
NR1I3-222ENST00000506018 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
NR1I3-222ENST00000506018 HSPA1LP34931 641 aa15.67■□□□□ 0.1
NR1I3-222ENST00000506018 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
NR1I3-222ENST00000506018 DIP2AQ14689 1571 aa15.67■□□□□ 0.1
NR1I3-222ENST00000506018 HFM1A2PYH4 1435 aa15.66■□□□□ 0.1
NR1I3-222ENST00000506018 KIF1BO60333 1816 aa15.66■□□□□ 0.1
NR1I3-222ENST00000506018 TRIM52Q96A61 297 aa15.65■□□□□ 0.1
NR1I3-222ENST00000506018 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
NR1I3-222ENST00000506018 TMEM94Q12767 1356 aa15.65■□□□□ 0.1
NR1I3-222ENST00000506018 TBX22Q9Y458 520 aa15.64■□□□□ 0.09
NR1I3-222ENST00000506018 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
NR1I3-222ENST00000506018 MSH6P52701 1360 aa15.62■□□□□ 0.09
NR1I3-222ENST00000506018 TRPM2O94759 1503 aa15.62■□□□□ 0.09
NR1I3-222ENST00000506018 NUTM2DQ5VT03 806 aaPredicted RBP15.62■□□□□ 0.09
NR1I3-222ENST00000506018 PIK3R4Q99570 1358 aa15.61■□□□□ 0.09
NR1I3-222ENST00000506018 CLTCL1P53675 1640 aa15.6■□□□□ 0.09
NR1I3-222ENST00000506018 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
NR1I3-222ENST00000506018 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
NR1I3-222ENST00000506018 ADAMTS13Q76LX8 1427 aa15.58■□□□□ 0.08
NR1I3-222ENST00000506018 NCOA3Q9Y6Q9 1424 aa15.58■□□□□ 0.08
NR1I3-222ENST00000506018 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
NR1I3-222ENST00000506018 FAM135BQ49AJ0 1406 aa15.57■□□□□ 0.08
NR1I3-222ENST00000506018 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
NR1I3-222ENST00000506018 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
NR1I3-222ENST00000506018 ROBO1Q9Y6N7 1651 aa15.56■□□□□ 0.08
NR1I3-222ENST00000506018 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
NR1I3-222ENST00000506018 NEXMIFQ5QGS0 1516 aa15.54■□□□□ 0.08
NR1I3-222ENST00000506018 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
NR1I3-222ENST00000506018 NRXN3Q9Y4C0 1643 aa15.53■□□□□ 0.08
NR1I3-222ENST00000506018 ILDR2Q71H61 639 aa15.52■□□□□ 0.08
NR1I3-222ENST00000506018 AMOTL2Q9Y2J4 779 aa15.52■□□□□ 0.08
NR1I3-222ENST00000506018 RPGRIP1LQ68CZ1 1315 aa15.52■□□□□ 0.07
NR1I3-222ENST00000506018 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
NR1I3-222ENST00000506018 ATF3P18847 181 aa15.51■□□□□ 0.07
NR1I3-222ENST00000506018 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
NR1I3-222ENST00000506018 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
NR1I3-222ENST00000506018 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.51■□□□□ 0.07
NR1I3-222ENST00000506018 C19orf44Q9H6X5 657 aa15.5■□□□□ 0.07
NR1I3-222ENST00000506018 XRN1Q8IZH2 1706 aaKnown RBP15.5■□□□□ 0.07
NR1I3-222ENST00000506018 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
NR1I3-222ENST00000506018 PHLPP1O60346 1717 aa15.49■□□□□ 0.07
NR1I3-222ENST00000506018 PPLO60437 1756 aa15.49■□□□□ 0.07
NR1I3-222ENST00000506018 SOCS7O14512 581 aa15.49■□□□□ 0.07
NR1I3-222ENST00000506018 KCNA4P22459 653 aa15.49■□□□□ 0.07
NR1I3-222ENST00000506018 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
NR1I3-222ENST00000506018 PTPRUQ92729 1446 aa15.47■□□□□ 0.07
NR1I3-222ENST00000506018 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
NR1I3-222ENST00000506018 DCCP43146 1447 aa15.47■□□□□ 0.07
NR1I3-222ENST00000506018 SETD5Q9C0A6 1442 aa15.46■□□□□ 0.06
NR1I3-222ENST00000506018 METP08581 1390 aa15.45■□□□□ 0.06
NR1I3-222ENST00000506018 SETD1AO15047 1707 aaKnown RBP15.42■□□□□ 0.06
NR1I3-222ENST00000506018 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
NR1I3-222ENST00000506018 JCADQ9P266 1359 aa15.42■□□□□ 0.06
NR1I3-222ENST00000506018 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
NR1I3-222ENST00000506018 PTCH1Q13635 1447 aa15.4■□□□□ 0.06
NR1I3-222ENST00000506018 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
NR1I3-222ENST00000506018 COL16A1Q07092 1604 aaPredicted RBP15.4■□□□□ 0.06
NR1I3-222ENST00000506018 AHDC1Q5TGY3 1603 aaPredicted RBP15.4■□□□□ 0.06
NR1I3-222ENST00000506018 NALCNQ8IZF0 1738 aa15.39■□□□□ 0.05
NR1I3-222ENST00000506018 IFT172Q9UG01 1749 aa15.39■□□□□ 0.05
NR1I3-222ENST00000506018 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
NR1I3-222ENST00000506018 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
NR1I3-222ENST00000506018 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
NR1I3-222ENST00000506018 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
NR1I3-222ENST00000506018 MST1RQ04912 1400 aa15.36■□□□□ 0.05
NR1I3-222ENST00000506018 PRAG1Q86YV5 1406 aa15.36■□□□□ 0.05
NR1I3-222ENST00000506018 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
NR1I3-222ENST00000506018 BRINP3Q76B58 766 aa15.36■□□□□ 0.05
NR1I3-222ENST00000506018 ASXL1Q8IXJ9 1541 aa15.35■□□□□ 0.05
NR1I3-222ENST00000506018 NHSL1Q5SYE7 1610 aa15.34■□□□□ 0.05
NR1I3-222ENST00000506018 ROBO2Q9HCK4 1378 aa15.33■□□□□ 0.04
NR1I3-222ENST00000506018 ADGRF5Q8IZF2 1346 aa15.33■□□□□ 0.04
NR1I3-222ENST00000506018 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
NR1I3-222ENST00000506018 KNDC1Q76NI1 1749 aa15.32■□□□□ 0.04
NR1I3-222ENST00000506018 LAMC1P11047 1609 aa15.32■□□□□ 0.04
NR1I3-222ENST00000506018 HRCP23327 699 aa15.31■□□□□ 0.04
NR1I3-222ENST00000506018 PIK3C2GO75747 1445 aa15.31■□□□□ 0.04
NR1I3-222ENST00000506018 LRRC59Q96AG4 307 aaKnown RBP15.3■□□□□ 0.04
NR1I3-222ENST00000506018 LRPPRCP42704 1394 aaKnown RBP15.29■□□□□ 0.04
NR1I3-222ENST00000506018 MYOM2P54296 1465 aa15.29■□□□□ 0.04
NR1I3-222ENST00000506018 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
NR1I3-222ENST00000506018 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms