RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 KDM5AP29375 1690 aaKnown RBP18.61■□□□□ 0.57
LMNA-220ENST00000504687 NEXMIFQ5QGS0 1516 aa18.6■□□□□ 0.57
LMNA-220ENST00000504687 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
LMNA-220ENST00000504687 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
LMNA-220ENST00000504687 SCAF11Q99590 1463 aaKnown RBP18.57■□□□□ 0.56
LMNA-220ENST00000504687 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
LMNA-220ENST00000504687 C11orf95C9JLR9 678 aaPredicted RBP18.56■□□□□ 0.56
LMNA-220ENST00000504687 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
LMNA-220ENST00000504687 IDI1Q13907 227 aa18.55■□□□□ 0.56
LMNA-220ENST00000504687 MYO5BQ9ULV0 1848 aa18.55■□□□□ 0.56
LMNA-220ENST00000504687 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
LMNA-220ENST00000504687 ZMYM3Q14202 1370 aa18.54■□□□□ 0.56
LMNA-220ENST00000504687 ST20-MTHFSA0A0A6YYL1 179 aa18.52■□□□□ 0.56
LMNA-220ENST00000504687 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
LMNA-220ENST00000504687 VGFO15240 615 aaPredicted RBP18.51■□□□□ 0.55
LMNA-220ENST00000504687 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
LMNA-220ENST00000504687 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
LMNA-220ENST00000504687 EIF3AQ14152 1382 aaKnown RBP18.5■□□□□ 0.55
LMNA-220ENST00000504687 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
LMNA-220ENST00000504687 TESK2Q96S53 571 aa18.49■□□□□ 0.55
LMNA-220ENST00000504687 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
LMNA-220ENST00000504687 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
LMNA-220ENST00000504687 ESF1Q9H501 851 aaKnown RBP18.48■□□□□ 0.55
LMNA-220ENST00000504687 FER1L4A9Z1Z3 1794 aa18.47■□□□□ 0.55
LMNA-220ENST00000504687 A2ML1A8K2U0 1454 aa18.47■□□□□ 0.55
LMNA-220ENST00000504687 SBNO2Q9Y2G9 1366 aa18.47■□□□□ 0.55
LMNA-220ENST00000504687 ANP32CO43423 234 aa18.46■□□□□ 0.55
LMNA-220ENST00000504687 C3P01024 1663 aa18.45■□□□□ 0.54
LMNA-220ENST00000504687 CHGAP10645 457 aaKnown RBP18.45■□□□□ 0.54
LMNA-220ENST00000504687 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
LMNA-220ENST00000504687 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
LMNA-220ENST00000504687 MLECQ14165 292 aa18.43■□□□□ 0.54
LMNA-220ENST00000504687 CFAP70Q5T0N1 1121 aa18.43■□□□□ 0.54
LMNA-220ENST00000504687 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
LMNA-220ENST00000504687 TNRQ92752 1358 aa18.42■□□□□ 0.54
LMNA-220ENST00000504687 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
LMNA-220ENST00000504687 TMF1P82094 1093 aa18.41■□□□□ 0.54
LMNA-220ENST00000504687 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
LMNA-220ENST00000504687 SETD1AO15047 1707 aaKnown RBP18.38■□□□□ 0.53
LMNA-220ENST00000504687 ARHGEF28Q8N1W1 1705 aaKnown RBP18.38■□□□□ 0.53
LMNA-220ENST00000504687 DISP3Q9P2K9 1392 aa18.38■□□□□ 0.53
LMNA-220ENST00000504687 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
LMNA-220ENST00000504687 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
LMNA-220ENST00000504687 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
LMNA-220ENST00000504687 ALKQ9UM73 1620 aa18.37■□□□□ 0.53
LMNA-220ENST00000504687 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.36■□□□□ 0.535e-9■□□□□ 8
LMNA-220ENST00000504687 QRICH2Q9H0J4 1663 aa18.35■□□□□ 0.53
LMNA-220ENST00000504687 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
LMNA-220ENST00000504687 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
LMNA-220ENST00000504687 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
LMNA-220ENST00000504687 PUS7Q96PZ0 661 aaKnown RBP18.33■□□□□ 0.52
LMNA-220ENST00000504687 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
LMNA-220ENST00000504687 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
LMNA-220ENST00000504687 MYOM1P52179 1685 aa18.33■□□□□ 0.52
LMNA-220ENST00000504687 DLC1Q96QB1 1528 aa18.33■□□□□ 0.52
LMNA-220ENST00000504687 SLIT1O75093 1534 aa18.32■□□□□ 0.52
LMNA-220ENST00000504687 CENPJQ9HC77 1338 aaPredicted RBP18.31■□□□□ 0.52
LMNA-220ENST00000504687 ARHGAP23Q9P227 1491 aa18.31■□□□□ 0.52
LMNA-220ENST00000504687 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
LMNA-220ENST00000504687 CENPBP07199 599 aaPredicted RBP18.3■□□□□ 0.52
LMNA-220ENST00000504687 KNDC1Q76NI1 1749 aa18.29■□□□□ 0.52
LMNA-220ENST00000504687 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
LMNA-220ENST00000504687 PTPRMP28827 1452 aa18.27■□□□□ 0.52
LMNA-220ENST00000504687 PER1O15534 1290 aaPredicted RBP18.27■□□□□ 0.52
LMNA-220ENST00000504687 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
LMNA-220ENST00000504687 TMEM132EQ6IEE7 984 aa18.24■□□□□ 0.51
LMNA-220ENST00000504687 LRPPRCP42704 1394 aaKnown RBP18.24■□□□□ 0.51
LMNA-220ENST00000504687 ABCC11Q96J66 1382 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 PLEKHG1Q9ULL1 1385 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 RALBP1Q15311 655 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 SIRT1Q96EB6 747 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 TECPR2O15040 1411 aa18.23■□□□□ 0.51
LMNA-220ENST00000504687 CEP170BQ9Y4F5 1589 aaPredicted RBP18.22■□□□□ 0.51
LMNA-220ENST00000504687 MED14O60244 1454 aa18.22■□□□□ 0.51
LMNA-220ENST00000504687 CEBPAP49715 358 aaPredicted RBP18.22■□□□□ 0.51
LMNA-220ENST00000504687 NUTM2DQ5VT03 806 aaPredicted RBP18.22■□□□□ 0.51
LMNA-220ENST00000504687 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
LMNA-220ENST00000504687 DIP2AQ14689 1571 aa18.21■□□□□ 0.51
LMNA-220ENST00000504687 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
LMNA-220ENST00000504687 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.51
LMNA-220ENST00000504687 POLR3GLQ9BT43 218 aa18.21■□□□□ 0.51
LMNA-220ENST00000504687 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
LMNA-220ENST00000504687 CPS1P31327 1500 aa18.2■□□□□ 0.5
LMNA-220ENST00000504687 FAM135BQ49AJ0 1406 aa18.19■□□□□ 0.5
LMNA-220ENST00000504687 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
LMNA-220ENST00000504687 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
LMNA-220ENST00000504687 ADAMTS13Q76LX8 1427 aa18.18■□□□□ 0.5
LMNA-220ENST00000504687 PANK3Q9H999 370 aa18.18■□□□□ 0.5
LMNA-220ENST00000504687 USP32Q8NFA0 1604 aa18.18■□□□□ 0.5
LMNA-220ENST00000504687 EVC2Q86UK5 1308 aa18.18■□□□□ 0.5
LMNA-220ENST00000504687 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
LMNA-220ENST00000504687 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
LMNA-220ENST00000504687 BRD4O60885 1362 aaPredicted RBP18.15■□□□□ 0.5
LMNA-220ENST00000504687 EID1Q9Y6B2 187 aa18.14■□□□□ 0.49
LMNA-220ENST00000504687 YTHDC1Q96MU7 727 aaKnown RBP18.13■□□□□ 0.49
LMNA-220ENST00000504687 METP08581 1390 aa18.12■□□□□ 0.49
LMNA-220ENST00000504687 LTKP29376 864 aa18.11■□□□□ 0.49
LMNA-220ENST00000504687 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms