RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.5
MATR3-210ENST00000504643 ALKQ9UM73 1620 aa11.9□□□□□ -0.5
MATR3-210ENST00000504643 NCOA3Q9Y6Q9 1424 aa11.9□□□□□ -0.5
MATR3-210ENST00000504643 NKTRP30414 1462 aaKnown RBP11.9□□□□□ -0.5
MATR3-210ENST00000504643 TET3O43151 1660 aa11.9□□□□□ -0.51
MATR3-210ENST00000504643 MSH6P52701 1360 aa11.89□□□□□ -0.51
MATR3-210ENST00000504643 PIK3R4Q99570 1358 aa11.87□□□□□ -0.51
MATR3-210ENST00000504643 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
MATR3-210ENST00000504643 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
MATR3-210ENST00000504643 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
MATR3-210ENST00000504643 SLAIN2Q9P270 581 aa11.85□□□□□ -0.51
MATR3-210ENST00000504643 NUP155O75694 1391 aa11.85□□□□□ -0.51
MATR3-210ENST00000504643 UNC13BO14795 1591 aa11.84□□□□□ -0.51
MATR3-210ENST00000504643 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
MATR3-210ENST00000504643 GCC2Q8IWJ2 1684 aa11.84□□□□□ -0.51
MATR3-210ENST00000504643 CADPS2Q86UW7 1296 aa11.83□□□□□ -0.52
MATR3-210ENST00000504643 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
MATR3-210ENST00000504643 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
MATR3-210ENST00000504643 TMEM131LA2VDJ0 1609 aa11.81□□□□□ -0.52
MATR3-210ENST00000504643 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
MATR3-210ENST00000504643 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
MATR3-210ENST00000504643 ATF3P18847 181 aa11.81□□□□□ -0.52
MATR3-210ENST00000504643 IQGAP3Q86VI3 1631 aa11.81□□□□□ -0.52
MATR3-210ENST00000504643 XIRP1Q702N8 1843 aaKnown RBP11.81□□□□□ -0.52
MATR3-210ENST00000504643 JCADQ9P266 1359 aa11.8□□□□□ -0.52
MATR3-210ENST00000504643 ITGAEP38570 1179 aa11.79□□□□□ -0.52
MATR3-210ENST00000504643 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
MATR3-210ENST00000504643 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
MATR3-210ENST00000504643 ADAMTS13Q76LX8 1427 aa11.78□□□□□ -0.52
MATR3-210ENST00000504643 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.52
MATR3-210ENST00000504643 E9PCH4 1651 aa11.77□□□□□ -0.53
MATR3-210ENST00000504643 TRPM2O94759 1503 aa11.77□□□□□ -0.53
MATR3-210ENST00000504643 SPATA31A6Q5VVP1 1343 aa11.77□□□□□ -0.53
MATR3-210ENST00000504643 ROBO1Q9Y6N7 1651 aa11.77□□□□□ -0.53
MATR3-210ENST00000504643 ZNF326Q5BKZ1 582 aaKnown RBP11.76□□□□□ -0.53
MATR3-210ENST00000504643 RGS17Q9UGC6 210 aaPredicted RBP11.76□□□□□ -0.53
MATR3-210ENST00000504643 DCCP43146 1447 aa11.75□□□□□ -0.53
MATR3-210ENST00000504643 NUTM2DQ5VT03 806 aaPredicted RBP11.74□□□□□ -0.53
MATR3-210ENST00000504643 ACIN1Q9UKV3 1341 aaKnown RBP11.74□□□□□ -0.53
MATR3-210ENST00000504643 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
MATR3-210ENST00000504643 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
MATR3-210ENST00000504643 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
MATR3-210ENST00000504643 RRBP1Q9P2E9 1410 aaKnown RBP11.73□□□□□ -0.53
MATR3-210ENST00000504643 MYO5BQ9ULV0 1848 aa11.72□□□□□ -0.53
MATR3-210ENST00000504643 PHLPP1O60346 1717 aa11.71□□□□□ -0.53
MATR3-210ENST00000504643 MEX3CQ5U5Q3 659 aaKnown RBP11.71□□□□□ -0.53
MATR3-210ENST00000504643 POTEAQ6S8J7 498 aa11.71□□□□□ -0.53
MATR3-210ENST00000504643 SETBP1Q9Y6X0 1596 aa11.71□□□□□ -0.54
MATR3-210ENST00000504643 TRIM52Q96A61 297 aa11.7□□□□□ -0.54
MATR3-210ENST00000504643 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
MATR3-210ENST00000504643 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
MATR3-210ENST00000504643 AHDC1Q5TGY3 1603 aaPredicted RBP11.69□□□□□ -0.54
MATR3-210ENST00000504643 NAIPQ13075 1403 aa11.69□□□□□ -0.54
MATR3-210ENST00000504643 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
MATR3-210ENST00000504643 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
MATR3-210ENST00000504643 BRINP3Q76B58 766 aa11.69□□□□□ -0.54
MATR3-210ENST00000504643 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.68□□□□□ -0.54
MATR3-210ENST00000504643 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
MATR3-210ENST00000504643 COL16A1Q07092 1604 aaPredicted RBP11.67□□□□□ -0.54
MATR3-210ENST00000504643 HFM1A2PYH4 1435 aa11.66□□□□□ -0.54
MATR3-210ENST00000504643 METP08581 1390 aa11.66□□□□□ -0.54
MATR3-210ENST00000504643 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
MATR3-210ENST00000504643 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
MATR3-210ENST00000504643 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
MATR3-210ENST00000504643 MST1RQ04912 1400 aa11.64□□□□□ -0.55
MATR3-210ENST00000504643 RXRBP28702 533 aa11.64□□□□□ -0.55
MATR3-210ENST00000504643 NEXMIFQ5QGS0 1516 aa11.63□□□□□ -0.55
MATR3-210ENST00000504643 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
MATR3-210ENST00000504643 SHPRHQ149N8 1683 aa11.63□□□□□ -0.55
MATR3-210ENST00000504643 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
MATR3-210ENST00000504643 KIF1BO60333 1816 aa11.62□□□□□ -0.55
MATR3-210ENST00000504643 PRAG1Q86YV5 1406 aa11.62□□□□□ -0.55
MATR3-210ENST00000504643 ASXL1Q8IXJ9 1541 aa11.62□□□□□ -0.55
MATR3-210ENST00000504643 CLTCL1P53675 1640 aa11.62□□□□□ -0.55
MATR3-210ENST00000504643 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
MATR3-210ENST00000504643 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
MATR3-210ENST00000504643 NUTM2AQ8IVF1 878 aaPredicted RBP11.61□□□□□ -0.55
MATR3-210ENST00000504643 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
MATR3-210ENST00000504643 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
MATR3-210ENST00000504643 LRP6O75581 1613 aa11.59□□□□□ -0.55
MATR3-210ENST00000504643 C1orf167Q5SNV9 1468 aa11.59□□□□□ -0.55
MATR3-210ENST00000504643 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
MATR3-210ENST00000504643 AFF2P51816 1311 aa11.58□□□□□ -0.56
MATR3-210ENST00000504643 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
MATR3-210ENST00000504643 LRPPRCP42704 1394 aaKnown RBP11.57□□□□□ -0.56
MATR3-210ENST00000504643 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
MATR3-210ENST00000504643 RBM6P78332 1123 aaKnown RBP11.57□□□□□ -0.56
MATR3-210ENST00000504643 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
MATR3-210ENST00000504643 MPHOSPH9Q99550 1183 aa11.57□□□□□ -0.56
MATR3-210ENST00000504643 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
MATR3-210ENST00000504643 ROBO2Q9HCK4 1378 aa11.57□□□□□ -0.56
MATR3-210ENST00000504643 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
MATR3-210ENST00000504643 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
MATR3-210ENST00000504643 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
MATR3-210ENST00000504643 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
MATR3-210ENST00000504643 FOXD1Q16676 465 aa11.55□□□□□ -0.56
MATR3-210ENST00000504643 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
MATR3-210ENST00000504643 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
MATR3-210ENST00000504643 ORAI2Q96SN7 254 aa11.54□□□□□ -0.56
MATR3-210ENST00000504643 RGL3Q3MIN7 710 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms