RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 KIF1BO60333 1816 aa20.69■□□□□ 0.9
HOXC6-203ENST00000504315 TRPM2O94759 1503 aa20.68■□□□□ 0.9
HOXC6-203ENST00000504315 PLEKHG1Q9ULL1 1385 aa20.68■□□□□ 0.9
HOXC6-203ENST00000504315 CLTCL1P53675 1640 aa20.67■□□□□ 0.9
HOXC6-203ENST00000504315 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
HOXC6-203ENST00000504315 DIP2AQ14689 1571 aa20.64■□□□□ 0.9
HOXC6-203ENST00000504315 HDGFP51858 240 aaKnown RBP20.63■□□□□ 0.89
HOXC6-203ENST00000504315 NKTRP30414 1462 aaKnown RBP20.62■□□□□ 0.89
HOXC6-203ENST00000504315 TOM1O60784 492 aa20.61■□□□□ 0.89
HOXC6-203ENST00000504315 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.61■□□□□ 0.89
HOXC6-203ENST00000504315 NRXN3Q9Y4C0 1643 aa20.6■□□□□ 0.89
HOXC6-203ENST00000504315 KCNA6P17658 529 aa20.6■□□□□ 0.89
HOXC6-203ENST00000504315 ADAMTS13Q76LX8 1427 aa20.6■□□□□ 0.89
HOXC6-203ENST00000504315 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
HOXC6-203ENST00000504315 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.89
HOXC6-203ENST00000504315 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.88
HOXC6-203ENST00000504315 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.88
HOXC6-203ENST00000504315 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
HOXC6-203ENST00000504315 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
HOXC6-203ENST00000504315 TBX22Q9Y458 520 aa20.55■□□□□ 0.88
HOXC6-203ENST00000504315 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
HOXC6-203ENST00000504315 PPLO60437 1756 aa20.54■□□□□ 0.88
HOXC6-203ENST00000504315 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
HOXC6-203ENST00000504315 TMEM94Q12767 1356 aa20.53■□□□□ 0.88
HOXC6-203ENST00000504315 XRN1Q8IZH2 1706 aaKnown RBP20.51■□□□□ 0.87
HOXC6-203ENST00000504315 BCANQ96GW7 911 aa20.51■□□□□ 0.87
HOXC6-203ENST00000504315 SETD1AO15047 1707 aaKnown RBP20.5■□□□□ 0.87
HOXC6-203ENST00000504315 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
HOXC6-203ENST00000504315 NUTM2DQ5VT03 806 aaPredicted RBP20.5■□□□□ 0.87
HOXC6-203ENST00000504315 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
HOXC6-203ENST00000504315 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
HOXC6-203ENST00000504315 SCAF1Q9H7N4 1312 aaKnown RBP20.48■□□□□ 0.87
HOXC6-203ENST00000504315 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
HOXC6-203ENST00000504315 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
HOXC6-203ENST00000504315 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
HOXC6-203ENST00000504315 HSPA1LP34931 641 aa20.46■□□□□ 0.87
HOXC6-203ENST00000504315 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
HOXC6-203ENST00000504315 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
HOXC6-203ENST00000504315 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
HOXC6-203ENST00000504315 ROBO1Q9Y6N7 1651 aa20.44■□□□□ 0.86
HOXC6-203ENST00000504315 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
HOXC6-203ENST00000504315 MPHOSPH9Q99550 1183 aa20.43■□□□□ 0.86
HOXC6-203ENST00000504315 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
HOXC6-203ENST00000504315 MSH6P52701 1360 aa20.42■□□□□ 0.86
HOXC6-203ENST00000504315 FOXD1Q16676 465 aa20.41■□□□□ 0.86
HOXC6-203ENST00000504315 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
HOXC6-203ENST00000504315 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
HOXC6-203ENST00000504315 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
HOXC6-203ENST00000504315 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
HOXC6-203ENST00000504315 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
HOXC6-203ENST00000504315 METP08581 1390 aa20.39■□□□□ 0.85
HOXC6-203ENST00000504315 DISP3Q9P2K9 1392 aa20.38■□□□□ 0.85
HOXC6-203ENST00000504315 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
HOXC6-203ENST00000504315 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
HOXC6-203ENST00000504315 VGFO15240 615 aaPredicted RBP20.36■□□□□ 0.85
HOXC6-203ENST00000504315 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
HOXC6-203ENST00000504315 NALCNQ8IZF0 1738 aa20.34■□□□□ 0.85
HOXC6-203ENST00000504315 DCCP43146 1447 aa20.34■□□□□ 0.85
HOXC6-203ENST00000504315 PHLPP1O60346 1717 aa20.33■□□□□ 0.84
HOXC6-203ENST00000504315 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
HOXC6-203ENST00000504315 PTCH1Q13635 1447 aa20.31■□□□□ 0.84
HOXC6-203ENST00000504315 HRCP23327 699 aa20.31■□□□□ 0.84
HOXC6-203ENST00000504315 SLAIN2Q9P270 581 aa20.3■□□□□ 0.84
HOXC6-203ENST00000504315 ANKRD30BQ9BXX2 1392 aa20.3■□□□□ 0.84
HOXC6-203ENST00000504315 KNDC1Q76NI1 1749 aa20.28■□□□□ 0.84
HOXC6-203ENST00000504315 CADPS2Q86UW7 1296 aa20.28■□□□□ 0.84
HOXC6-203ENST00000504315 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
HOXC6-203ENST00000504315 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.84
HOXC6-203ENST00000504315 AHDC1Q5TGY3 1603 aaPredicted RBP20.27■□□□□ 0.84
HOXC6-203ENST00000504315 PIK3C2GO75747 1445 aa20.27■□□□□ 0.83
HOXC6-203ENST00000504315 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
HOXC6-203ENST00000504315 ADGRF5Q8IZF2 1346 aa20.25■□□□□ 0.83
HOXC6-203ENST00000504315 MYOM2P54296 1465 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 LAMC1P11047 1609 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 ASXL1Q8IXJ9 1541 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 ATF3P18847 181 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
HOXC6-203ENST00000504315 MST1RQ04912 1400 aa20.23■□□□□ 0.83
HOXC6-203ENST00000504315 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
HOXC6-203ENST00000504315 ILDR2Q71H61 639 aa20.23■□□□□ 0.83
HOXC6-203ENST00000504315 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
HOXC6-203ENST00000504315 TECPR2O15040 1411 aa20.22■□□□□ 0.83
HOXC6-203ENST00000504315 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
HOXC6-203ENST00000504315 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
HOXC6-203ENST00000504315 BRINP3Q76B58 766 aa20.16■□□□□ 0.82
HOXC6-203ENST00000504315 LRPPRCP42704 1394 aaKnown RBP20.15■□□□□ 0.82
HOXC6-203ENST00000504315 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
HOXC6-203ENST00000504315 JCADQ9P266 1359 aa20.14■□□□□ 0.81
HOXC6-203ENST00000504315 C1orf167Q5SNV9 1468 aa20.12■□□□□ 0.81
HOXC6-203ENST00000504315 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
HOXC6-203ENST00000504315 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
HOXC6-203ENST00000504315 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
HOXC6-203ENST00000504315 FMN2Q9NZ56 1722 aa20.09■□□□□ 0.81
HOXC6-203ENST00000504315 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
HOXC6-203ENST00000504315 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
HOXC6-203ENST00000504315 TMEM132EQ6IEE7 984 aa20.07■□□□□ 0.8
HOXC6-203ENST00000504315 STAC3Q96MF2 364 aa20.07■□□□□ 0.8
HOXC6-203ENST00000504315 SOCS7O14512 581 aa20.06■□□□□ 0.8
HOXC6-203ENST00000504315 SIRT1Q96EB6 747 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms