RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
HMGXB3-202ENST00000503427 TULP1O00294 542 aaPredicted RBP20.05■□□□□ 0.8
HMGXB3-202ENST00000503427 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
HMGXB3-202ENST00000503427 KIAA1107Q9UPP5 1409 aa20.04■□□□□ 0.8
HMGXB3-202ENST00000503427 APAF1O14727 1248 aa20.04■□□□□ 0.8
HMGXB3-202ENST00000503427 SUPT6HQ7KZ85 1726 aaKnown RBP20.04■□□□□ 0.8
HMGXB3-202ENST00000503427 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
HMGXB3-202ENST00000503427 CUL7Q14999 1698 aa20.03■□□□□ 0.8
HMGXB3-202ENST00000503427 GSE1Q14687 1217 aa20.02■□□□□ 0.8
HMGXB3-202ENST00000503427 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
HMGXB3-202ENST00000503427 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
HMGXB3-202ENST00000503427 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
HMGXB3-202ENST00000503427 PHF14O94880 888 aa20.01■□□□□ 0.79
HMGXB3-202ENST00000503427 EPRSP07814 1512 aaKnown RBP20■□□□□ 0.79
HMGXB3-202ENST00000503427 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
HMGXB3-202ENST00000503427 COG6Q9Y2V7 657 aa20■□□□□ 0.79
HMGXB3-202ENST00000503427 DAPK1P53355 1430 aa19.99■□□□□ 0.79
HMGXB3-202ENST00000503427 TPM4P67936 248 aa19.99■□□□□ 0.79
HMGXB3-202ENST00000503427 GORABQ5T7V8 394 aa19.99■□□□□ 0.79
HMGXB3-202ENST00000503427 SLC4A3P48751 1232 aa19.98■□□□□ 0.79
HMGXB3-202ENST00000503427 TAF7LQ5H9L4 462 aa19.98■□□□□ 0.79
HMGXB3-202ENST00000503427 TEFQ10587 303 aa19.98■□□□□ 0.79
HMGXB3-202ENST00000503427 SKOR2Q2VWA4 1001 aaPredicted RBP19.98■□□□□ 0.79
HMGXB3-202ENST00000503427 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
HMGXB3-202ENST00000503427 ANKRD45Q5TZF3 282 aa19.97■□□□□ 0.79
HMGXB3-202ENST00000503427 CHMP3Q9Y3E7 222 aa19.97■□□□□ 0.79
HMGXB3-202ENST00000503427 SCAPERQ9BY12 1400 aa19.97■□□□□ 0.79
HMGXB3-202ENST00000503427 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.96■□□□□ 0.79
HMGXB3-202ENST00000503427 PSME1Q06323 249 aa19.96■□□□□ 0.79
HMGXB3-202ENST00000503427 WASHC2AQ641Q2 1341 aa19.96■□□□□ 0.79
HMGXB3-202ENST00000503427 CFAP70Q5T0N1 1121 aa19.96■□□□□ 0.79
HMGXB3-202ENST00000503427 NOL8Q76FK4 1167 aaKnown RBP19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 BRD4O60885 1362 aaPredicted RBP19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 KIF16BQ96L93 1317 aa19.95■□□□□ 0.78
HMGXB3-202ENST00000503427 CCDC34Q96HJ3 373 aa19.94■□□□□ 0.78
HMGXB3-202ENST00000503427 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
HMGXB3-202ENST00000503427 RIPK4P57078 832 aa19.94■□□□□ 0.78
HMGXB3-202ENST00000503427 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
HMGXB3-202ENST00000503427 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
HMGXB3-202ENST00000503427 DDX49Q9Y6V7 483 aaKnown RBP19.93■□□□□ 0.78
HMGXB3-202ENST00000503427 KIF3AQ9Y496 699 aa19.92■□□□□ 0.78
HMGXB3-202ENST00000503427 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
HMGXB3-202ENST00000503427 CABP2Q9NPB3 220 aa19.91■□□□□ 0.78
HMGXB3-202ENST00000503427 API5Q9BZZ5 524 aaKnown RBP19.9■□□□□ 0.78
HMGXB3-202ENST00000503427 TMX4Q9H1E5 349 aaPredicted RBP19.9■□□□□ 0.78
HMGXB3-202ENST00000503427 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
HMGXB3-202ENST00000503427 EVA1CP58658 441 aa19.9■□□□□ 0.78
HMGXB3-202ENST00000503427 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
HMGXB3-202ENST00000503427 DZIP1LQ8IYY4 767 aaKnown RBP19.89■□□□□ 0.78
HMGXB3-202ENST00000503427 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
HMGXB3-202ENST00000503427 GGNBP2Q9H3C7 697 aa19.89■□□□□ 0.77
HMGXB3-202ENST00000503427 ATP6V1DQ9Y5K8 247 aa19.89■□□□□ 0.77
HMGXB3-202ENST00000503427 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
HMGXB3-202ENST00000503427 GNAI1P63096 354 aa19.88■□□□□ 0.77
HMGXB3-202ENST00000503427 AAMPQ13685 434 aa19.88■□□□□ 0.77
HMGXB3-202ENST00000503427 TTC5Q8N0Z6 440 aa19.87■□□□□ 0.77
HMGXB3-202ENST00000503427 RILPL2Q969X0 211 aa19.87■□□□□ 0.77
HMGXB3-202ENST00000503427 RPGRIP1LQ68CZ1 1315 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 NAIPQ13075 1403 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 FOXD4L5Q5VV16 416 aaPredicted RBP19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 FOXD4L4Q8WXT5 416 aaPredicted RBP19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 REC8O95072 547 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 ARID3AQ99856 593 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 CHMP5Q9NZZ3 219 aa19.86■□□□□ 0.77
HMGXB3-202ENST00000503427 NEXNQ0ZGT2 675 aa19.85■□□□□ 0.77
HMGXB3-202ENST00000503427 ISY1Q9ULR0 285 aaKnown RBP19.85■□□□□ 0.77
HMGXB3-202ENST00000503427 ATF3P18847 181 aa19.85■□□□□ 0.77
HMGXB3-202ENST00000503427 TXNDC2Q86VQ3 553 aa19.85■□□□□ 0.77
HMGXB3-202ENST00000503427 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
HMGXB3-202ENST00000503427 NBPF8Q3BBV2 869 aa19.84■□□□□ 0.77
HMGXB3-202ENST00000503427 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
HMGXB3-202ENST00000503427 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
HMGXB3-202ENST00000503427 CHMP4CQ96CF2 233 aa19.83■□□□□ 0.77
HMGXB3-202ENST00000503427 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
HMGXB3-202ENST00000503427 GTF2E1P29083 439 aaPredicted RBP19.83■□□□□ 0.76
HMGXB3-202ENST00000503427 MTHFSP49914 203 aa19.82■□□□□ 0.76
HMGXB3-202ENST00000503427 THEMISQ8N1K5 641 aaPredicted RBP19.82■□□□□ 0.76
HMGXB3-202ENST00000503427 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
HMGXB3-202ENST00000503427 SF3A1Q15459 793 aaKnown RBP19.81■□□□□ 0.76
HMGXB3-202ENST00000503427 PRAM1Q96QH2 718 aa19.81■□□□□ 0.76
HMGXB3-202ENST00000503427 RAPGEF3O95398 923 aa19.8■□□□□ 0.76
HMGXB3-202ENST00000503427 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
HMGXB3-202ENST00000503427 PPP2R1AP30153 589 aa19.8■□□□□ 0.76
HMGXB3-202ENST00000503427 HSP90AA2PQ14568 343 aaPredicted RBP19.8■□□□□ 0.76
HMGXB3-202ENST00000503427 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
HMGXB3-202ENST00000503427 EIF2S2P20042 333 aaKnown RBP19.79■□□□□ 0.76
HMGXB3-202ENST00000503427 NLRP6P59044 892 aa19.79■□□□□ 0.76
HMGXB3-202ENST00000503427 PLB1Q6P1J6 1458 aa19.79■□□□□ 0.76
HMGXB3-202ENST00000503427 RAPGEF4Q8WZA2 1011 aa19.79■□□□□ 0.76
HMGXB3-202ENST00000503427 HMOX1P09601 288 aa19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 C9orf78Q9NZ63 289 aaPredicted RBP19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 H3BQV1 296 aa19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 IFFO2Q5TF58 517 aa19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 RUFY2Q8WXA3 655 aa19.78■□□□□ 0.76
HMGXB3-202ENST00000503427 GPRASP1Q5JY77 1395 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms