RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 DUSP27Q5VZP5 1158 aa32.14■■■□□ 2.73
DDX41-202ENST00000503078 AMER1Q5JTC6 1135 aaPredicted RBP32.11■■■□□ 2.73
DDX41-202ENST00000503078 ZNF521Q96K83 1311 aa32.11■■■□□ 2.73
DDX41-202ENST00000503078 CENPQQ7L2Z9 268 aaPredicted RBP32.1■■■□□ 2.73
DDX41-202ENST00000503078 SYNMO15061 1565 aa32.1■■■□□ 2.73
DDX41-202ENST00000503078 CDCA8Q53HL2 280 aa32.08■■■□□ 2.73
DDX41-202ENST00000503078 GOLGA2Q08379 1002 aa32.08■■■□□ 2.73
DDX41-202ENST00000503078 EFCAB2Q5VUJ9 269 aa32.07■■■□□ 2.72
DDX41-202ENST00000503078 ASXL1Q8IXJ9 1541 aa32.05■■■□□ 2.72
DDX41-202ENST00000503078 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.04■■■□□ 2.72
DDX41-202ENST00000503078 PIK3C2GO75747 1445 aa32.04■■■□□ 2.72
DDX41-202ENST00000503078 SCAF11Q99590 1463 aaKnown RBP32.04■■■□□ 2.72
DDX41-202ENST00000503078 ABCC1P33527 1531 aa32.03■■■□□ 2.72
DDX41-202ENST00000503078 SPHKAPQ2M3C7 1700 aa32.03■■■□□ 2.72
DDX41-202ENST00000503078 SCAPERQ9BY12 1400 aa32.01■■■□□ 2.72
DDX41-202ENST00000503078 TRPM2O94759 1503 aa32.01■■■□□ 2.71
DDX41-202ENST00000503078 STAC3Q96MF2 364 aa32■■■□□ 2.71
DDX41-202ENST00000503078 ARAP3Q8WWN8 1544 aa32■■■□□ 2.71
DDX41-202ENST00000503078 SLFN5Q08AF3 891 aa31.99■■■□□ 2.71
DDX41-202ENST00000503078 NPC1L1Q9UHC9 1359 aa31.99■■■□□ 2.71
DDX41-202ENST00000503078 CEP152O94986 1710 aa31.99■■■□□ 2.71
DDX41-202ENST00000503078 MYOM1P52179 1685 aa31.97■■■□□ 2.71
DDX41-202ENST00000503078 FAM161AQ3B820 660 aa31.96■■■□□ 2.71
DDX41-202ENST00000503078 TRAPPC8Q9Y2L5 1435 aa31.95■■■□□ 2.71
DDX41-202ENST00000503078 TRMT2AQ8IZ69 625 aaKnown RBP31.94■■■□□ 2.7
DDX41-202ENST00000503078 PTPRTO14522 1441 aa31.93■■■□□ 2.7
DDX41-202ENST00000503078 C8orf34Q49A92 452 aa31.92■■■□□ 2.7
DDX41-202ENST00000503078 CLTCL1P53675 1640 aa31.91■■■□□ 2.7
DDX41-202ENST00000503078 EIF3AQ14152 1382 aaKnown RBP31.91■■■□□ 2.7
DDX41-202ENST00000503078 KDM5AP29375 1690 aaKnown RBP31.88■■■□□ 2.69
DDX41-202ENST00000503078 CCDC146Q8IYE0 955 aa31.88■■■□□ 2.69
DDX41-202ENST00000503078 NKTRP30414 1462 aaKnown RBP31.88■■■□□ 2.69
DDX41-202ENST00000503078 DAXXQ9UER7 740 aaPredicted RBP31.87■■■□□ 2.69
DDX41-202ENST00000503078 KIAA1210Q9ULL0 1709 aa31.86■■■□□ 2.69
DDX41-202ENST00000503078 RTEL1-TNFRSF6BF6WH68 1400 aa31.85■■■□□ 2.69
DDX41-202ENST00000503078 ABCA9Q8IUA7 1624 aa31.85■■■□□ 2.69
DDX41-202ENST00000503078 SPAG9O60271 1321 aaKnown RBP31.85■■■□□ 2.69
DDX41-202ENST00000503078 APAF1O14727 1248 aa31.83■■■□□ 2.69
DDX41-202ENST00000503078 SLC4A3P48751 1232 aa31.83■■■□□ 2.69
DDX41-202ENST00000503078 NFKBIBQ15653 356 aa31.83■■■□□ 2.69
DDX41-202ENST00000503078 IL27Q8NEV9 243 aa31.83■■■□□ 2.69
DDX41-202ENST00000503078 DEPDC5O75140 1603 aa31.83■■■□□ 2.69
DDX41-202ENST00000503078 SPINK5Q9NQ38 1064 aaPredicted RBP31.83■■■□□ 2.69
DDX41-202ENST00000503078 TET3O43151 1660 aa31.82■■■□□ 2.68
DDX41-202ENST00000503078 ZFYVE16Q7Z3T8 1539 aa31.81■■■□□ 2.68
DDX41-202ENST00000503078 E9PSI1 815 aa31.8■■■□□ 2.68
DDX41-202ENST00000503078 OSCARQ8IYS5 282 aa31.8■■■□□ 2.68
DDX41-202ENST00000503078 AFAP1Q8N556 730 aa31.8■■■□□ 2.68
DDX41-202ENST00000503078 RGS3P49796 1198 aa31.79■■■□□ 2.68
DDX41-202ENST00000503078 FANCAO15360 1455 aa31.79■■■□□ 2.68
DDX41-202ENST00000503078 ASXL2Q76L83 1435 aa31.78■■■□□ 2.68
DDX41-202ENST00000503078 SLC24A1O60721 1099 aa31.78■■■□□ 2.68
DDX41-202ENST00000503078 NGEFQ8N5V2 710 aa31.78■■■□□ 2.68
DDX41-202ENST00000503078 BCAR3O75815 825 aa31.77■■■□□ 2.68
DDX41-202ENST00000503078 GSE1Q14687 1217 aa31.77■■■□□ 2.68
DDX41-202ENST00000503078 NEURL4Q96JN8 1562 aa31.76■■■□□ 2.68
DDX41-202ENST00000503078 ERVK-7P63135 1459 aa31.75■■■□□ 2.67
DDX41-202ENST00000503078 KANK1Q14678 1352 aa31.72■■■□□ 2.67
DDX41-202ENST00000503078 VWDEQ8N2E2 1590 aa31.72■■■□□ 2.67
DDX41-202ENST00000503078 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
DDX41-202ENST00000503078 INO80Q9ULG1 1556 aaPredicted RBP31.7■■■□□ 2.66
DDX41-202ENST00000503078 MYOM2P54296 1465 aa31.69■■■□□ 2.66
DDX41-202ENST00000503078 CARD14Q9BXL6 1004 aa31.69■■■□□ 2.66
DDX41-202ENST00000503078 CGNL1Q0VF96 1302 aa31.69■■■□□ 2.66
DDX41-202ENST00000503078 CFAP70Q5T0N1 1121 aa31.68■■■□□ 2.66
DDX41-202ENST00000503078 ABCA6Q8N139 1617 aa31.68■■■□□ 2.66
DDX41-202ENST00000503078 PDE3AQ14432 1141 aa31.68■■■□□ 2.66
DDX41-202ENST00000503078 DMRT2Q9Y5R5 561 aa31.68■■■□□ 2.66
DDX41-202ENST00000503078 ATP7AQ04656 1500 aa31.67■■■□□ 2.66
DDX41-202ENST00000503078 NINLQ9Y2I6 1382 aa31.67■■■□□ 2.66
DDX41-202ENST00000503078 VIRMAQ69YN4 1812 aaKnown RBP31.67■■■□□ 2.66
DDX41-202ENST00000503078 ADGRL1O94910 1474 aa31.67■■■□□ 2.66
DDX41-202ENST00000503078 IGHDP01880 384 aa31.66■■■□□ 2.66
DDX41-202ENST00000503078 POLR3AO14802 1390 aaPredicted RBP31.65■■■□□ 2.66
DDX41-202ENST00000503078 CENPJQ9HC77 1338 aaPredicted RBP31.63■■■□□ 2.65
DDX41-202ENST00000503078 ADGRF5Q8IZF2 1346 aa31.61■■■□□ 2.65
DDX41-202ENST00000503078 RTN4Q9NQC3 1192 aaKnown RBP31.61■■■□□ 2.65
DDX41-202ENST00000503078 WWC1Q8IX03 1113 aa31.61■■■□□ 2.65
DDX41-202ENST00000503078 FRAT1Q92837 279 aaPredicted RBP31.6■■■□□ 2.65
DDX41-202ENST00000503078 CLUAP1Q96AJ1 413 aa31.6■■■□□ 2.65
DDX41-202ENST00000503078 MYO3AQ8NEV4 1616 aa31.6■■■□□ 2.65
DDX41-202ENST00000503078 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
DDX41-202ENST00000503078 KIF3BO15066 747 aa31.59■■■□□ 2.65
DDX41-202ENST00000503078 NPM1P06748 294 aaKnown RBP eCLIP31.59■■■□□ 2.65
DDX41-202ENST00000503078 KIF1BO60333 1816 aa31.59■■■□□ 2.65
DDX41-202ENST00000503078 SBNO2Q9Y2G9 1366 aa31.58■■■□□ 2.65
DDX41-202ENST00000503078 MAPK8IP3Q9UPT6 1336 aa31.58■■■□□ 2.65
DDX41-202ENST00000503078 IFT172Q9UG01 1749 aa31.58■■■□□ 2.65
DDX41-202ENST00000503078 CANXP27824 592 aaKnown RBP31.57■■■□□ 2.64
DDX41-202ENST00000503078 USP19O94966 1318 aa31.56■■■□□ 2.64
DDX41-202ENST00000503078 COG6Q9Y2V7 657 aa31.55■■■□□ 2.64
DDX41-202ENST00000503078 FRAT2O75474 233 aaPredicted RBP31.54■■■□□ 2.64
DDX41-202ENST00000503078 PANK1Q8TE04 598 aa31.54■■■□□ 2.64
DDX41-202ENST00000503078 MROH1Q8NDA8 1641 aa31.54■■■□□ 2.64
DDX41-202ENST00000503078 NRXN1Q9ULB1 1477 aa31.53■■■□□ 2.64
DDX41-202ENST00000503078 SHPRHQ149N8 1683 aa31.53■■■□□ 2.64
DDX41-202ENST00000503078 BRPF3Q9ULD4 1205 aa31.52■■■□□ 2.64
DDX41-202ENST00000503078 EFCAB6Q5THR3 1501 aa31.49■■■□□ 2.63
DDX41-202ENST00000503078 MROH2AA6NES4 1674 aa31.49■■■□□ 2.63
DDX41-202ENST00000503078 KIDINS220Q9ULH0 1771 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms