RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 TMUB1Q9BVT8 246 aa10.76□□□□□ -0.69
RFC1-204ENST00000502706 NUDT18Q6ZVK8 323 aa10.75□□□□□ -0.69
RFC1-204ENST00000502706 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
RFC1-204ENST00000502706 PRIM1P49642 420 aaKnown RBP10.73□□□□□ -0.69
RFC1-204ENST00000502706 P3H3Q8IVL6 736 aa10.73□□□□□ -0.69
RFC1-204ENST00000502706 COPS2P61201 443 aa10.71□□□□□ -0.69
RFC1-204ENST00000502706 SLF2Q8IX21 1173 aa10.71□□□□□ -0.69
RFC1-204ENST00000502706 GRXCR2A6NFK2 248 aa10.69□□□□□ -0.7
RFC1-204ENST00000502706 ZPR1O75312 459 aa10.69□□□□□ -0.7
RFC1-204ENST00000502706 BRPF1P55201 1214 aaPredicted RBP10.69□□□□□ -0.7
RFC1-204ENST00000502706 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
RFC1-204ENST00000502706 LMOD2Q6P5Q4 547 aa10.68□□□□□ -0.7
RFC1-204ENST00000502706 CDHR5Q9HBB8 845 aa10.68□□□□□ -0.7
RFC1-204ENST00000502706 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
RFC1-204ENST00000502706 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
RFC1-204ENST00000502706 SLC4A3P48751 1232 aa10.66□□□□□ -0.7
RFC1-204ENST00000502706 OSBPP22059 807 aa10.65□□□□□ -0.7
RFC1-204ENST00000502706 SLC19A1P41440 591 aa10.65□□□□□ -0.7
RFC1-204ENST00000502706 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
RFC1-204ENST00000502706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFC1-204ENST00000502706 TTC13Q8NBP0 860 aa10.65□□□□□ -0.7
RFC1-204ENST00000502706 PRR14Q9BWN1 585 aa10.65□□□□□ -0.7
RFC1-204ENST00000502706 DGAT1O75907 488 aa10.64□□□□□ -0.71
RFC1-204ENST00000502706 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
RFC1-204ENST00000502706 E2F4Q16254 413 aa10.63□□□□□ -0.71
RFC1-204ENST00000502706 MYT1Q01538 1121 aa10.62□□□□□ -0.71
RFC1-204ENST00000502706 PCDHB3Q9Y5E6 796 aa10.62□□□□□ -0.71
RFC1-204ENST00000502706 PRR20EP86478 221 aa10.61□□□□□ -0.71
RFC1-204ENST00000502706 PRR20CP86479 221 aa10.61□□□□□ -0.71
RFC1-204ENST00000502706 PRR20DP86480 221 aa10.61□□□□□ -0.71
RFC1-204ENST00000502706 PRR20BP86481 221 aa10.61□□□□□ -0.71
RFC1-204ENST00000502706 PRR20AP86496 221 aa10.61□□□□□ -0.71
RFC1-204ENST00000502706 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
RFC1-204ENST00000502706 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
RFC1-204ENST00000502706 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
RFC1-204ENST00000502706 EMID1Q96A84 441 aaPredicted RBP10.6□□□□□ -0.71
RFC1-204ENST00000502706 NEUROD2Q15784 382 aa10.59□□□□□ -0.71
RFC1-204ENST00000502706 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
RFC1-204ENST00000502706 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
RFC1-204ENST00000502706 ANKLE1Q8NAG6 615 aa10.57□□□□□ -0.72
RFC1-204ENST00000502706 EYA1Q99502 592 aa10.57□□□□□ -0.72
RFC1-204ENST00000502706 POTECB2RU33 542 aa10.55□□□□□ -0.72
RFC1-204ENST00000502706 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
RFC1-204ENST00000502706 UBTFP17480 764 aaKnown RBP10.54□□□□□ -0.72
RFC1-204ENST00000502706 TLL1O43897 1013 aa10.53□□□□□ -0.72
RFC1-204ENST00000502706 ZNF697Q5TEC3 545 aa10.53□□□□□ -0.72
RFC1-204ENST00000502706 FAM187AA6NFU0 413 aa10.52□□□□□ -0.73
RFC1-204ENST00000502706 LIAT1Q6ZQX7 453 aa10.51□□□□□ -0.73
RFC1-204ENST00000502706 KCNV2Q8TDN2 545 aa10.51□□□□□ -0.73
RFC1-204ENST00000502706 GDF9O60383 454 aa10.5□□□□□ -0.73
RFC1-204ENST00000502706 PPEF1O14829 653 aaPredicted RBP10.49□□□□□ -0.73
RFC1-204ENST00000502706 S1PR4O95977 384 aa10.49□□□□□ -0.73
RFC1-204ENST00000502706 TRIM26Q12899 539 aaPredicted RBP10.49□□□□□ -0.73
RFC1-204ENST00000502706 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
RFC1-204ENST00000502706 NPM2Q86SE8 214 aaKnown RBP10.49□□□□□ -0.73
RFC1-204ENST00000502706 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
RFC1-204ENST00000502706 DNAJB2P25686 324 aa10.48□□□□□ -0.73
RFC1-204ENST00000502706 KMT5BQ4FZB7 885 aa10.48□□□□□ -0.73
RFC1-204ENST00000502706 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
RFC1-204ENST00000502706 ACTN4O43707 911 aaKnown RBP10.47□□□□□ -0.73
RFC1-204ENST00000502706 LCE2AQ5TA79 106 aaPredicted RBP10.47□□□□□ -0.73
RFC1-204ENST00000502706 AAASQ9NRG9 546 aa10.46□□□□□ -0.73
RFC1-204ENST00000502706 ADH1BP00325 375 aa10.45□□□□□ -0.74
RFC1-204ENST00000502706 TMEM134Q9H6X4 195 aa10.45□□□□□ -0.74
RFC1-204ENST00000502706 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
RFC1-204ENST00000502706 SLC24A3Q9HC58 644 aa10.44□□□□□ -0.74
RFC1-204ENST00000502706 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
RFC1-204ENST00000502706 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
RFC1-204ENST00000502706 NR1I2O75469 434 aa10.42□□□□□ -0.74
RFC1-204ENST00000502706 CFHP08603 1231 aa10.42□□□□□ -0.74
RFC1-204ENST00000502706 SLC6A16Q9GZN6 736 aa10.41□□□□□ -0.74
RFC1-204ENST00000502706 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
RFC1-204ENST00000502706 PLA2G2CQ5R387 149 aa10.39□□□□□ -0.75
RFC1-204ENST00000502706 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
RFC1-204ENST00000502706 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
RFC1-204ENST00000502706 PTGDRQ13258 359 aa10.38□□□□□ -0.75
RFC1-204ENST00000502706 RCCD1A6NED2 376 aa10.37□□□□□ -0.75
RFC1-204ENST00000502706 HRCP23327 699 aa10.37□□□□□ -0.75
RFC1-204ENST00000502706 PKD2L1Q9P0L9 805 aa10.37□□□□□ -0.75
RFC1-204ENST00000502706 FOXC1Q12948 553 aa10.35□□□□□ -0.75
RFC1-204ENST00000502706 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
RFC1-204ENST00000502706 WFS1O76024 890 aa10.34□□□□□ -0.75
RFC1-204ENST00000502706 AVPP01185 164 aa10.34□□□□□ -0.75
RFC1-204ENST00000502706 SLC10A3P09131 477 aa10.34□□□□□ -0.75
RFC1-204ENST00000502706 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
RFC1-204ENST00000502706 RB1CC1Q8TDY2 1594 aa10.32□□□□□ -0.76
RFC1-204ENST00000502706 RPIAP49247 311 aa10.32□□□□□ -0.76
RFC1-204ENST00000502706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
RFC1-204ENST00000502706 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
RFC1-204ENST00000502706 CTC1Q2NKJ3 1217 aa10.31□□□□□ -0.76
RFC1-204ENST00000502706 SPSB2Q99619 263 aa10.31□□□□□ -0.76
RFC1-204ENST00000502706 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
RFC1-204ENST00000502706 C11orf95C9JLR9 678 aaPredicted RBP10.3□□□□□ -0.76
RFC1-204ENST00000502706 AXIN1O15169 862 aa10.3□□□□□ -0.76
RFC1-204ENST00000502706 TOR4AQ9NXH8 423 aa10.3□□□□□ -0.76
RFC1-204ENST00000502706 STK17AQ9UEE5 414 aa10.3□□□□□ -0.76
RFC1-204ENST00000502706 TESPA1A2RU30 521 aaPredicted RBP10.29□□□□□ -0.76
RFC1-204ENST00000502706 ZMYND10O75800 440 aa10.29□□□□□ -0.76
RFC1-204ENST00000502706 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
RFC1-204ENST00000502706 GMPR2Q9P2T1 348 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms