RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 IQCEQ6IPM2 695 aa13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 CCDC91Q7Z6B0 441 aa13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
AC055713.1-201ENST00000498967 RGL3Q3MIN7 710 aa13.52□□□□□ -0.24
AC055713.1-201ENST00000498967 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.24
AC055713.1-201ENST00000498967 CPLX1O14810 134 aa13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 MCTP1Q6DN14 999 aa13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 REC8O95072 547 aa13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 OLFM4Q6UX06 510 aa13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 PIP4K2AP48426 406 aaPredicted RBP13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
AC055713.1-201ENST00000498967 TRDNQ13061 729 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 ANKRD62A6NC57 917 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 GSE1Q14687 1217 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 RNF20Q5VTR2 975 aa13.51□□□□□ -0.25
AC055713.1-201ENST00000498967 KANK1Q14678 1352 aa13.5□□□□□ -0.25
AC055713.1-201ENST00000498967 BRMS1Q9HCU9 246 aa13.5□□□□□ -0.25
AC055713.1-201ENST00000498967 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
AC055713.1-201ENST00000498967 CCDC97Q96F63 343 aaPredicted RBP13.49□□□□□ -0.25
AC055713.1-201ENST00000498967 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
AC055713.1-201ENST00000498967 TRIM21P19474 475 aaKnown RBP13.49□□□□□ -0.25
AC055713.1-201ENST00000498967 ERICH2A1L162 156 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 XBP1P17861 261 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 ERLIN1O75477 346 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 TXLNAP40222 546 aa13.48□□□□□ -0.25
AC055713.1-201ENST00000498967 DDX23Q9BUQ8 820 aaKnown RBP13.47□□□□□ -0.25
AC055713.1-201ENST00000498967 BICD2Q8TD16 824 aa13.47□□□□□ -0.25
AC055713.1-201ENST00000498967 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
AC055713.1-201ENST00000498967 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
AC055713.1-201ENST00000498967 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 GOLGA6L10A0A0M3HER8 536 aa13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 FILIP1LQ4L180 1135 aa13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 CCAR1Q8IX12 1150 aaKnown RBP13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.25
AC055713.1-201ENST00000498967 KIF7Q2M1P5 1343 aa13.46□□□□□ -0.26
AC055713.1-201ENST00000498967 LETM1O95202 739 aaPredicted RBP13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 ANKRD18BA2A2Z9 1011 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 DDX11Q96FC9 970 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 DNAI2Q9GZS0 605 aa13.45□□□□□ -0.26
AC055713.1-201ENST00000498967 CCER2I3L3R5 266 aa13.44□□□□□ -0.26
AC055713.1-201ENST00000498967 NUCB2P80303 420 aa13.43□□□□□ -0.26
AC055713.1-201ENST00000498967 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
AC055713.1-201ENST00000498967 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
AC055713.1-201ENST00000498967 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
AC055713.1-201ENST00000498967 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
AC055713.1-201ENST00000498967 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
AC055713.1-201ENST00000498967 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
AC055713.1-201ENST00000498967 HMGB1P09429 215 aaKnown RBP13.4□□□□□ -0.26
AC055713.1-201ENST00000498967 SHTN1A0MZ66 631 aa13.4□□□□□ -0.26
AC055713.1-201ENST00000498967 FYB1O15117 783 aa13.4□□□□□ -0.26
AC055713.1-201ENST00000498967 POLR3GO15318 223 aaPredicted RBP13.4□□□□□ -0.26
AC055713.1-201ENST00000498967 CARMIL1Q5VZK9 1371 aa13.4□□□□□ -0.26
AC055713.1-201ENST00000498967 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
AC055713.1-201ENST00000498967 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
AC055713.1-201ENST00000498967 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
AC055713.1-201ENST00000498967 VPS37DQ86XT2 251 aa13.39□□□□□ -0.27
AC055713.1-201ENST00000498967 ZWINTO95229 277 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 CETN2P41208 172 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 CCDC181Q5TID7 509 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 TAX1BP1Q86VP1 789 aa13.38□□□□□ -0.27
AC055713.1-201ENST00000498967 VGFO15240 615 aaPredicted RBP13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 STIM1Q13586 685 aa13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 PDCL2Q8N4E4 241 aa13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 SEPT6Q14141 434 aa13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 ROCK1Q13464 1354 aa13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 PDCP20941 246 aa13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC055713.1-201ENST00000498967 PDE3BQ13370 1112 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 SDF4Q9BRK5 362 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 MCM3P25205 808 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 PDILTQ8N807 584 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 FAM114A1Q8IWE2 563 aa13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
AC055713.1-201ENST00000498967 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 RAD21O60216 631 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms