RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 UBAP1LF5GYI3 381 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PHF14O94880 888 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 SSTR3P32745 418 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 TMEM259Q4ZIN3 620 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 MYSM1Q5VVJ2 828 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 DPY19L2Q6NUT2 758 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 CCDC97Q96F63 343 aaPredicted RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 POM121Q96HA1 1249 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PCDH10Q9P2E7 1040 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 BOLA1Q9Y3E2 137 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PTPRTO14522 1441 aa4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZCCHC6Q5VYS8 1495 aaKnown RBP4.18□□□□□ -1.74
CKS1BP2-201ENST00000497342 PPRC1Q5VV67 1664 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 RAD21O60216 631 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 EVI5O60447 810 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 SRPK2P78362 688 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 RETREG2Q8NC44 543 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 UPF1Q92900 1129 aaKnown RBP eCLIP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 TRIM35Q9UPQ4 493 aa4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 TARBP1Q13395 1621 aaKnown RBP4.17□□□□□ -1.74
CKS1BP2-201ENST00000497342 ADAMTSL3P82987 1691 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 YEATS2Q9ULM3 1422 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 OATP04181 439 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 RFC5P40937 340 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 IRF5Q13568 498 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TMEM92Q6UXU6 159 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 CHRDL2Q6WN34 429 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 METTL3Q86U44 580 aaKnown RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 BEGAINQ9BUH8 593 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 OCEL1Q9H607 264 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 ZNF777Q9ULD5 760 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 USTQ9Y2C2 406 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 MAGI1Q96QZ7 1491 aaPredicted RBP4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TOPBP1Q92547 1522 aa4.16□□□□□ -1.74
CKS1BP2-201ENST00000497342 TDRD9Q8NDG6 1382 aaKnown RBP4.15□□□□□ -1.74
CKS1BP2-201ENST00000497342 CEP170Q5SW79 1584 aa4.15□□□□□ -1.74
CKS1BP2-201ENST00000497342 CLK2P49760 499 aaKnown RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 KCNA1Q09470 495 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 ASTLQ6HA08 431 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 POTEAQ6S8J7 498 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 PROCA1Q8NCQ7 364 aaPredicted RBP4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 PXYLP1Q8TE99 480 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 AMOTL2Q9Y2J4 779 aa4.15□□□□□ -1.75
CKS1BP2-201ENST00000497342 BRD1O95696 1058 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 FBXO31Q5XUX0 539 aaPredicted RBP4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 MTMR14Q8NCE2 650 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 DDX12PQ92771 950 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 FBXW7Q969H0 707 aa4.14□□□□□ -1.75
CKS1BP2-201ENST00000497342 SPTLC1O15269 473 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 MDM2Q00987 491 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 TMCO4Q5TGY1 634 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 L3MBTL3Q96JM7 780 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 CDHR5Q9HBB8 845 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 SNRKQ9NRH2 765 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 ZNF330Q9Y3S2 320 aaPredicted RBP4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 ADGRG1Q9Y653 693 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 MROH2BQ7Z745 1585 aa4.13□□□□□ -1.75
CKS1BP2-201ENST00000497342 CEP350Q5VT06 3117 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 GLI2P10070 1586 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 MFAP1P55081 439 aaKnown RBP4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 SLAIN1Q8ND83 568 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 JPH4Q96JJ6 628 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 PCDHGA10Q9Y5H3 936 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 KIF21BO75037 1637 aa4.12□□□□□ -1.75
CKS1BP2-201ENST00000497342 GPR37L1O60883 481 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 TYW1BQ6NUM6 668 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 PBXIP1Q96AQ6 731 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 RBM33Q96EV2 1170 aaKnown RBP4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 TBC1D2Q9BYX2 928 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 STRCQ7RTU9 1775 aa4.11□□□□□ -1.75
CKS1BP2-201ENST00000497342 ABCC8Q09428 1581 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ADCY10Q96PN6 1610 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ATMINO43313 823 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 LILRB3O75022 631 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 CD46P15529 392 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 ATN1P54259 1190 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 PRPF38BQ5VTL8 546 aaKnown RBP4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 LIMD1Q9UGP4 676 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 MTMR7Q9Y216 660 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 TEX14Q8IWB6 1497 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 SHROOM2Q13796 1616 aa4.1□□□□□ -1.75
CKS1BP2-201ENST00000497342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 CFAP70Q5T0N1 1121 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 RSBN1LQ6PCB5 846 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 WWC1Q8IX03 1113 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GLMNQ92990 594 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GJD4Q96KN9 370 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GNEQ9Y223 722 aaKnown RBP4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 GRIN2BQ13224 1484 aa4.09□□□□□ -1.75
CKS1BP2-201ENST00000497342 MADDQ8WXG6 1647 aa4.09□□□□□ -1.76
CKS1BP2-201ENST00000497342 SETD1AO15047 1707 aaKnown RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 GALR2O43603 387 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 FOSBP53539 338 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PIP4K2BP78356 416 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 RIC3Q7Z5B4 369 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 SPIRE2Q8WWL2 714 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRG4Q92954 1404 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 GZF1Q9H116 711 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRM3Q9NNZ6 103 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 IGSF5Q9NSI5 407 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms