RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
UBE2L3-203ENST00000496722 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
UBE2L3-203ENST00000496722 IQGAP3Q86VI3 1631 aa18.49■□□□□ 0.55
UBE2L3-203ENST00000496722 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
UBE2L3-203ENST00000496722 SPAG9O60271 1321 aaKnown RBP18.48■□□□□ 0.55
UBE2L3-203ENST00000496722 CENPQQ7L2Z9 268 aaPredicted RBP18.48■□□□□ 0.55
UBE2L3-203ENST00000496722 IGHDP01880 384 aa18.48■□□□□ 0.55
UBE2L3-203ENST00000496722 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
UBE2L3-203ENST00000496722 KIF3BO15066 747 aa18.46■□□□□ 0.55
UBE2L3-203ENST00000496722 DAXXQ9UER7 740 aaPredicted RBP18.46■□□□□ 0.55
UBE2L3-203ENST00000496722 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
UBE2L3-203ENST00000496722 PANK1Q8TE04 598 aa18.46■□□□□ 0.55
UBE2L3-203ENST00000496722 ADGRF5Q8IZF2 1346 aa18.45■□□□□ 0.54
UBE2L3-203ENST00000496722 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
UBE2L3-203ENST00000496722 FRAT1Q92837 279 aaPredicted RBP18.45■□□□□ 0.54
UBE2L3-203ENST00000496722 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
UBE2L3-203ENST00000496722 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
UBE2L3-203ENST00000496722 FAM161AQ3B820 660 aa18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 TNNQ9UQP3 1299 aa18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 EIF2AK4Q9P2K8 1649 aaKnown RBP18.44■□□□□ 0.54
UBE2L3-203ENST00000496722 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
UBE2L3-203ENST00000496722 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
UBE2L3-203ENST00000496722 SEC24BO95487 1268 aa18.42■□□□□ 0.54
UBE2L3-203ENST00000496722 ATP10AO60312 1499 aa18.42■□□□□ 0.54
UBE2L3-203ENST00000496722 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
UBE2L3-203ENST00000496722 CHD1O14646 1710 aa18.41■□□□□ 0.54
UBE2L3-203ENST00000496722 LAMC1P11047 1609 aa18.41■□□□□ 0.54
UBE2L3-203ENST00000496722 MADDQ8WXG6 1647 aa18.41■□□□□ 0.54
UBE2L3-203ENST00000496722 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
UBE2L3-203ENST00000496722 SCAF11Q99590 1463 aaKnown RBP18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 FRAT2O75474 233 aaPredicted RBP18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 PLCH2O75038 1416 aa18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 ASXL1Q8IXJ9 1541 aa18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 PLXNC1O60486 1568 aa18.4■□□□□ 0.54
UBE2L3-203ENST00000496722 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
UBE2L3-203ENST00000496722 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
UBE2L3-203ENST00000496722 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
UBE2L3-203ENST00000496722 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
UBE2L3-203ENST00000496722 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
UBE2L3-203ENST00000496722 SLC12A5Q9H2X9 1139 aa18.37■□□□□ 0.53
UBE2L3-203ENST00000496722 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
UBE2L3-203ENST00000496722 USP35Q9P2H5 1018 aa18.37■□□□□ 0.53
UBE2L3-203ENST00000496722 CLTCL1P53675 1640 aa18.37■□□□□ 0.53
UBE2L3-203ENST00000496722 INSRP06213 1382 aa18.36■□□□□ 0.53
UBE2L3-203ENST00000496722 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
UBE2L3-203ENST00000496722 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
UBE2L3-203ENST00000496722 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
UBE2L3-203ENST00000496722 GSE1Q14687 1217 aa18.35■□□□□ 0.53
UBE2L3-203ENST00000496722 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
UBE2L3-203ENST00000496722 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
UBE2L3-203ENST00000496722 E9PSI1 815 aa18.34■□□□□ 0.53
UBE2L3-203ENST00000496722 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.53
UBE2L3-203ENST00000496722 PIK3C2GO75747 1445 aa18.33■□□□□ 0.52
UBE2L3-203ENST00000496722 MYOM1P52179 1685 aa18.32■□□□□ 0.52
UBE2L3-203ENST00000496722 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
UBE2L3-203ENST00000496722 RLBP1P12271 317 aa18.32■□□□□ 0.52
UBE2L3-203ENST00000496722 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBE2L3-203ENST00000496722 ABCC1P33527 1531 aa18.31■□□□□ 0.52
UBE2L3-203ENST00000496722 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
UBE2L3-203ENST00000496722 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
UBE2L3-203ENST00000496722 SYNMO15061 1565 aa18.31■□□□□ 0.52
UBE2L3-203ENST00000496722 ERVK-7P63135 1459 aa18.31■□□□□ 0.52
UBE2L3-203ENST00000496722 USP19O94966 1318 aa18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 ZCCHC11Q5TAX3 1644 aaKnown RBP18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 TRPM2O94759 1503 aa18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
UBE2L3-203ENST00000496722 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
UBE2L3-203ENST00000496722 CFAP65Q6ZU64 1925 aaKnown RBP18.28■□□□□ 0.52
UBE2L3-203ENST00000496722 SPHKAPQ2M3C7 1700 aa18.27■□□□□ 0.52
UBE2L3-203ENST00000496722 PTPRTO14522 1441 aa18.27■□□□□ 0.52
UBE2L3-203ENST00000496722 MTHFSP49914 203 aa18.26■□□□□ 0.51
UBE2L3-203ENST00000496722 ARXQ96QS3 562 aa18.26■□□□□ 0.51
UBE2L3-203ENST00000496722 GGT6Q6P531 493 aa18.26■□□□□ 0.51
UBE2L3-203ENST00000496722 NSD3Q9BZ95 1437 aa18.26■□□□□ 0.51
UBE2L3-203ENST00000496722 KANK1Q14678 1352 aa18.26■□□□□ 0.51
UBE2L3-203ENST00000496722 ZFYVE16Q7Z3T8 1539 aa18.25■□□□□ 0.51
UBE2L3-203ENST00000496722 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
UBE2L3-203ENST00000496722 CEP152O94986 1710 aa18.23■□□□□ 0.51
UBE2L3-203ENST00000496722 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
UBE2L3-203ENST00000496722 NOS1P29475 1434 aa18.23■□□□□ 0.51
UBE2L3-203ENST00000496722 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
UBE2L3-203ENST00000496722 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
UBE2L3-203ENST00000496722 ABCA6Q8N139 1617 aa18.21■□□□□ 0.51
UBE2L3-203ENST00000496722 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
UBE2L3-203ENST00000496722 POGKQ9P215 609 aa18.21■□□□□ 0.51
UBE2L3-203ENST00000496722 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
UBE2L3-203ENST00000496722 U2AF1L5P0DN76 240 aaPredicted RBP18.2■□□□□ 0.5
UBE2L3-203ENST00000496722 U2AF1Q01081 240 aaKnown RBP eCLIP18.2■□□□□ 0.5
UBE2L3-203ENST00000496722 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
UBE2L3-203ENST00000496722 FANCAO15360 1455 aa18.2■□□□□ 0.5
UBE2L3-203ENST00000496722 RUNDC1Q96C34 613 aa18.19■□□□□ 0.5
UBE2L3-203ENST00000496722 PDZRN3Q9UPQ7 1066 aa18.19■□□□□ 0.5
UBE2L3-203ENST00000496722 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms