RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 MAP3K4Q9Y6R4 1608 aa14.88□□□□□ -0.03
CMSS1-208ENST00000496116 MYT1Q01538 1121 aa14.88□□□□□ -0.03
CMSS1-208ENST00000496116 CC2D1BQ5T0F9 858 aaKnown RBP14.87□□□□□ -0.03
CMSS1-208ENST00000496116 SYNMO15061 1565 aa14.87□□□□□ -0.03
CMSS1-208ENST00000496116 INSRP06213 1382 aa14.86□□□□□ -0.03
CMSS1-208ENST00000496116 ZMYM4Q5VZL5 1548 aa14.86□□□□□ -0.03
CMSS1-208ENST00000496116 UGGT1Q9NYU2 1555 aa14.86□□□□□ -0.03
CMSS1-208ENST00000496116 IFT172Q9UG01 1749 aa14.85□□□□□ -0.03
CMSS1-208ENST00000496116 KNSTRNQ9Y448 316 aa14.85□□□□□ -0.03
CMSS1-208ENST00000496116 RNF123Q5XPI4 1314 aa14.84□□□□□ -0.03
CMSS1-208ENST00000496116 NEO1Q92859 1461 aa14.84□□□□□ -0.03
CMSS1-208ENST00000496116 ABCA6Q8N139 1617 aa14.83□□□□□ -0.03
CMSS1-208ENST00000496116 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
CMSS1-208ENST00000496116 PDE3BQ13370 1112 aa14.83□□□□□ -0.04
CMSS1-208ENST00000496116 MROH2AA6NES4 1674 aa14.83□□□□□ -0.04
CMSS1-208ENST00000496116 KDM5AP29375 1690 aaKnown RBP14.82□□□□□ -0.04
CMSS1-208ENST00000496116 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
CMSS1-208ENST00000496116 ADGRB3O60242 1522 aa14.82□□□□□ -0.04
CMSS1-208ENST00000496116 NRXN1Q9ULB1 1477 aa14.81□□□□□ -0.04
CMSS1-208ENST00000496116 CFAP70Q5T0N1 1121 aa14.81□□□□□ -0.04
CMSS1-208ENST00000496116 ADGRF5Q8IZF2 1346 aa14.8□□□□□ -0.04
CMSS1-208ENST00000496116 GGT6Q6P531 493 aa14.8□□□□□ -0.04
CMSS1-208ENST00000496116 NPATQ14207 1427 aa14.8□□□□□ -0.04
CMSS1-208ENST00000496116 BLMP54132 1417 aaPredicted RBP14.8□□□□□ -0.04
CMSS1-208ENST00000496116 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
CMSS1-208ENST00000496116 B4GALNT3Q6L9W6 998 aa14.79□□□□□ -0.04
CMSS1-208ENST00000496116 MYOM1P52179 1685 aa14.79□□□□□ -0.04
CMSS1-208ENST00000496116 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
CMSS1-208ENST00000496116 SETBP1Q9Y6X0 1596 aa14.78□□□□□ -0.04
CMSS1-208ENST00000496116 ABCC3O15438 1527 aa14.77□□□□□ -0.04
CMSS1-208ENST00000496116 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.04
CMSS1-208ENST00000496116 CHGAP10645 457 aaKnown RBP14.77□□□□□ -0.04
CMSS1-208ENST00000496116 AMER1Q5JTC6 1135 aaPredicted RBP14.77□□□□□ -0.04
CMSS1-208ENST00000496116 NPC1L1Q9UHC9 1359 aa14.77□□□□□ -0.04
CMSS1-208ENST00000496116 NOS1P29475 1434 aa14.77□□□□□ -0.05
CMSS1-208ENST00000496116 RPGRIP1LQ68CZ1 1315 aa14.76□□□□□ -0.05
CMSS1-208ENST00000496116 PPLO60437 1756 aa14.76□□□□□ -0.05
CMSS1-208ENST00000496116 SBNO2Q9Y2G9 1366 aa14.76□□□□□ -0.05
CMSS1-208ENST00000496116 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
CMSS1-208ENST00000496116 CAMSAP1Q5T5Y3 1602 aa14.75□□□□□ -0.05
CMSS1-208ENST00000496116 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
CMSS1-208ENST00000496116 PPP2R1AP30153 589 aa14.75□□□□□ -0.05
CMSS1-208ENST00000496116 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
CMSS1-208ENST00000496116 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
CMSS1-208ENST00000496116 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
CMSS1-208ENST00000496116 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
CMSS1-208ENST00000496116 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
CMSS1-208ENST00000496116 RCAN3Q9UKA8 241 aa14.73□□□□□ -0.05
CMSS1-208ENST00000496116 RICTORQ6R327 1708 aa14.73□□□□□ -0.05
CMSS1-208ENST00000496116 ZC3H13Q5T200 1668 aaKnown RBP14.72□□□□□ -0.05
CMSS1-208ENST00000496116 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
CMSS1-208ENST00000496116 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
CMSS1-208ENST00000496116 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
CMSS1-208ENST00000496116 C14orf93Q9H972 538 aaKnown RBP14.71□□□□□ -0.05
CMSS1-208ENST00000496116 ADAMTS8Q9UP79 889 aa14.71□□□□□ -0.06
CMSS1-208ENST00000496116 ARHGAP31Q2M1Z3 1444 aa14.7□□□□□ -0.06
CMSS1-208ENST00000496116 PIK3C2BO00750 1634 aa14.7□□□□□ -0.06
CMSS1-208ENST00000496116 GLI2P10070 1586 aa14.69□□□□□ -0.06
CMSS1-208ENST00000496116 SIGLEC1Q9BZZ2 1709 aa14.69□□□□□ -0.06
CMSS1-208ENST00000496116 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
CMSS1-208ENST00000496116 QRICH2Q9H0J4 1663 aa14.67□□□□□ -0.06
CMSS1-208ENST00000496116 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
CMSS1-208ENST00000496116 CDCA7LQ96GN5 454 aa14.67□□□□□ -0.06
CMSS1-208ENST00000496116 TRAK1Q9UPV9 953 aa14.67□□□□□ -0.06
CMSS1-208ENST00000496116 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
CMSS1-208ENST00000496116 SLC52A1Q9NWF4 448 aa14.65□□□□□ -0.06
CMSS1-208ENST00000496116 NEXMIFQ5QGS0 1516 aa14.65□□□□□ -0.06
CMSS1-208ENST00000496116 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
CMSS1-208ENST00000496116 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
CMSS1-208ENST00000496116 CARD14Q9BXL6 1004 aa14.63□□□□□ -0.07
CMSS1-208ENST00000496116 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
CMSS1-208ENST00000496116 ANP32EQ9BTT0 268 aa14.62□□□□□ -0.07
CMSS1-208ENST00000496116 PUS7Q96PZ0 661 aaKnown RBP14.62□□□□□ -0.07
CMSS1-208ENST00000496116 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
CMSS1-208ENST00000496116 IDI1Q13907 227 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 PREX1Q8TCU6 1659 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 ARHGEF28Q8N1W1 1705 aaKnown RBP14.6□□□□□ -0.07
CMSS1-208ENST00000496116 PLEKHH1Q9ULM0 1364 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 EVC2Q86UK5 1308 aa14.6□□□□□ -0.07
CMSS1-208ENST00000496116 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
CMSS1-208ENST00000496116 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
CMSS1-208ENST00000496116 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
CMSS1-208ENST00000496116 USP32Q8NFA0 1604 aa14.58□□□□□ -0.07
CMSS1-208ENST00000496116 POLR3AO14802 1390 aaPredicted RBP14.58□□□□□ -0.08
CMSS1-208ENST00000496116 DIP2BQ9P265 1576 aa14.58□□□□□ -0.08
CMSS1-208ENST00000496116 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
CMSS1-208ENST00000496116 RIMBP3CA6NJZ7 1639 aa14.58□□□□□ -0.08
CMSS1-208ENST00000496116 RIMBP3BA6NNM3 1639 aa14.58□□□□□ -0.08
CMSS1-208ENST00000496116 RIMBP3Q9UFD9 1639 aa14.58□□□□□ -0.08
CMSS1-208ENST00000496116 DUSP27Q5VZP5 1158 aa14.57□□□□□ -0.08
CMSS1-208ENST00000496116 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
CMSS1-208ENST00000496116 SLC12A5Q9H2X9 1139 aa14.57□□□□□ -0.08
CMSS1-208ENST00000496116 TMEM131LA2VDJ0 1609 aa14.56□□□□□ -0.08
CMSS1-208ENST00000496116 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
CMSS1-208ENST00000496116 MYO5BQ9ULV0 1848 aa14.55□□□□□ -0.08
CMSS1-208ENST00000496116 CCDC146Q8IYE0 955 aa14.55□□□□□ -0.08
CMSS1-208ENST00000496116 REREQ9P2R6 1566 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms