RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
SSR3-208ENST00000496050 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
SSR3-208ENST00000496050 PSEN2P49810 448 aa10.56□□□□□ -0.72
SSR3-208ENST00000496050 RIC3Q7Z5B4 369 aa10.56□□□□□ -0.72
SSR3-208ENST00000496050 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
SSR3-208ENST00000496050 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
SSR3-208ENST00000496050 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
SSR3-208ENST00000496050 RDH13Q8NBN7 331 aa10.54□□□□□ -0.72
SSR3-208ENST00000496050 PBX2P40425 430 aa10.53□□□□□ -0.72
SSR3-208ENST00000496050 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
SSR3-208ENST00000496050 SPTLC1O15269 473 aa10.52□□□□□ -0.73
SSR3-208ENST00000496050 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
SSR3-208ENST00000496050 GJA5P36382 358 aa10.52□□□□□ -0.73
SSR3-208ENST00000496050 SLC4A3P48751 1232 aa10.52□□□□□ -0.73
SSR3-208ENST00000496050 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.73
SSR3-208ENST00000496050 A6NJR5 290 aa10.51□□□□□ -0.73
SSR3-208ENST00000496050 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
SSR3-208ENST00000496050 LIMD1Q9UGP4 676 aa10.51□□□□□ -0.73
SSR3-208ENST00000496050 ST18O60284 1047 aa10.5□□□□□ -0.73
SSR3-208ENST00000496050 EMP3P54852 163 aa10.5□□□□□ -0.73
SSR3-208ENST00000496050 KDM4AO75164 1064 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 RFC5P40937 340 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 USP46P62068 366 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 MCM6Q14566 821 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 PPP2R2DQ66LE6 453 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
SSR3-208ENST00000496050 ZNF687Q8N1G0 1237 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
SSR3-208ENST00000496050 MOXD2PA6NHM9 499 aa10.48□□□□□ -0.73
SSR3-208ENST00000496050 GCGRP47871 477 aa10.48□□□□□ -0.73
SSR3-208ENST00000496050 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
SSR3-208ENST00000496050 HOMEZQ8IX15 550 aa10.48□□□□□ -0.73
SSR3-208ENST00000496050 SPDYE5A6NIY4 337 aa10.47□□□□□ -0.73
SSR3-208ENST00000496050 RAD21O60216 631 aa10.47□□□□□ -0.73
SSR3-208ENST00000496050 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
SSR3-208ENST00000496050 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
SSR3-208ENST00000496050 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
SSR3-208ENST00000496050 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
SSR3-208ENST00000496050 NDUFV2P19404 249 aa10.46□□□□□ -0.73
SSR3-208ENST00000496050 LAPTM4BQ86VI4 370 aa10.46□□□□□ -0.73
SSR3-208ENST00000496050 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.73
SSR3-208ENST00000496050 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
SSR3-208ENST00000496050 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
SSR3-208ENST00000496050 CLUAP1Q96AJ1 413 aa10.45□□□□□ -0.74
SSR3-208ENST00000496050 NUTM2BA6NNL0 878 aaPredicted RBP10.44□□□□□ -0.74
SSR3-208ENST00000496050 NUTM2EB1AL46 878 aaPredicted RBP10.44□□□□□ -0.74
SSR3-208ENST00000496050 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
SSR3-208ENST00000496050 NUTM2DQ5VT03 806 aaPredicted RBP10.44□□□□□ -0.74
SSR3-208ENST00000496050 NUTM2AQ8IVF1 878 aaPredicted RBP10.44□□□□□ -0.74
SSR3-208ENST00000496050 SLF2Q8IX21 1173 aa10.44□□□□□ -0.74
SSR3-208ENST00000496050 NBPF3Q9H094 633 aa10.44□□□□□ -0.74
SSR3-208ENST00000496050 TRAK2O60296 914 aa10.43□□□□□ -0.74
SSR3-208ENST00000496050 LILRB3O75022 631 aa10.43□□□□□ -0.74
SSR3-208ENST00000496050 SLC10A3P09131 477 aa10.43□□□□□ -0.74
SSR3-208ENST00000496050 PRPF38BQ5VTL8 546 aaKnown RBP10.43□□□□□ -0.74
SSR3-208ENST00000496050 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
SSR3-208ENST00000496050 PCDHB15Q9Y5E8 787 aa10.43□□□□□ -0.74
SSR3-208ENST00000496050 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
SSR3-208ENST00000496050 TK2O00142 265 aa10.41□□□□□ -0.74
SSR3-208ENST00000496050 APBB1O00213 710 aa10.41□□□□□ -0.74
SSR3-208ENST00000496050 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
SSR3-208ENST00000496050 HOXA2O43364 376 aa10.4□□□□□ -0.74
SSR3-208ENST00000496050 FDX1P10109 184 aa10.4□□□□□ -0.74
SSR3-208ENST00000496050 QPCTQ16769 361 aa10.39□□□□□ -0.75
SSR3-208ENST00000496050 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
SSR3-208ENST00000496050 SAMD7Q7Z3H4 446 aa10.39□□□□□ -0.75
SSR3-208ENST00000496050 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
SSR3-208ENST00000496050 PRM3Q9NNZ6 103 aa10.39□□□□□ -0.75
SSR3-208ENST00000496050 BHMG1C9JSJ3 638 aaPredicted RBP10.38□□□□□ -0.75
SSR3-208ENST00000496050 AP1G2O75843 785 aa10.38□□□□□ -0.75
SSR3-208ENST00000496050 RTL5Q5HYW3 569 aaPredicted RBP10.38□□□□□ -0.75
SSR3-208ENST00000496050 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
SSR3-208ENST00000496050 HRCP23327 699 aa10.37□□□□□ -0.75
SSR3-208ENST00000496050 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
SSR3-208ENST00000496050 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
SSR3-208ENST00000496050 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
SSR3-208ENST00000496050 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
SSR3-208ENST00000496050 ARID3CA6NKF2 412 aa10.36□□□□□ -0.75
SSR3-208ENST00000496050 STAC3Q96MF2 364 aa10.36□□□□□ -0.75
SSR3-208ENST00000496050 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
SSR3-208ENST00000496050 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
SSR3-208ENST00000496050 POM121Q96HA1 1249 aa10.35□□□□□ -0.75
SSR3-208ENST00000496050 COG6Q9Y2V7 657 aa10.35□□□□□ -0.75
SSR3-208ENST00000496050 SOCS7O14512 581 aa10.34□□□□□ -0.75
SSR3-208ENST00000496050 RNF40O75150 1001 aa10.34□□□□□ -0.75
SSR3-208ENST00000496050 KMT5BQ4FZB7 885 aa10.34□□□□□ -0.75
SSR3-208ENST00000496050 WWC1Q8IX03 1113 aa10.34□□□□□ -0.75
SSR3-208ENST00000496050 PCDHGC3Q9UN70 934 aa10.34□□□□□ -0.75
SSR3-208ENST00000496050 CFHP08603 1231 aa10.33□□□□□ -0.76
SSR3-208ENST00000496050 FUT2Q10981 343 aa10.33□□□□□ -0.76
SSR3-208ENST00000496050 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
SSR3-208ENST00000496050 ARID3AQ99856 593 aa10.33□□□□□ -0.76
SSR3-208ENST00000496050 C1orf115Q9H7X2 142 aa10.33□□□□□ -0.76
SSR3-208ENST00000496050 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSR3-208ENST00000496050 MTMR2Q13614 643 aa10.32□□□□□ -0.76
SSR3-208ENST00000496050 ADGRD1Q6QNK2 874 aa10.32□□□□□ -0.76
SSR3-208ENST00000496050 LRCH3Q96II8 777 aa10.32□□□□□ -0.76
SSR3-208ENST00000496050 ZNF777Q9ULD5 760 aaPredicted RBP10.32□□□□□ -0.76
SSR3-208ENST00000496050 POTEB3A0JP26 581 aa10.31□□□□□ -0.76
SSR3-208ENST00000496050 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms