RNA–Protein interactions for RNA: ENST00000495594.2

LEMD1-208, Transcript of LEM domain containing 1, humanhuman

TSL 3 BASIC

Gene LEMD1, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-208ENST00000495594 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
LEMD1-208ENST00000495594 E9PCH4 1651 aa12.32□□□□□ -0.44
LEMD1-208ENST00000495594 SENP3Q9H4L4 574 aaPredicted RBP12.31□□□□□ -0.44
LEMD1-208ENST00000495594 MSH6P52701 1360 aa12.3□□□□□ -0.44
LEMD1-208ENST00000495594 TMEM94Q12767 1356 aa12.3□□□□□ -0.44
LEMD1-208ENST00000495594 KCNA6P17658 529 aa12.3□□□□□ -0.44
LEMD1-208ENST00000495594 IDI1Q13907 227 aa12.3□□□□□ -0.44
LEMD1-208ENST00000495594 CHIC2Q9UKJ5 165 aa12.3□□□□□ -0.44
LEMD1-208ENST00000495594 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
LEMD1-208ENST00000495594 PLEKHG1Q9ULL1 1385 aa12.29□□□□□ -0.44
LEMD1-208ENST00000495594 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
LEMD1-208ENST00000495594 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
LEMD1-208ENST00000495594 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
LEMD1-208ENST00000495594 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.45
LEMD1-208ENST00000495594 NCOA3Q9Y6Q9 1424 aa12.27□□□□□ -0.45
LEMD1-208ENST00000495594 TRPM2O94759 1503 aa12.27□□□□□ -0.45
LEMD1-208ENST00000495594 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
LEMD1-208ENST00000495594 FAM50AQ14320 339 aaKnown RBP12.26□□□□□ -0.45
LEMD1-208ENST00000495594 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
LEMD1-208ENST00000495594 BCANQ96GW7 911 aa12.26□□□□□ -0.45
LEMD1-208ENST00000495594 SHPRHQ149N8 1683 aa12.26□□□□□ -0.45
LEMD1-208ENST00000495594 SLC26A8Q96RN1 970 aa12.25□□□□□ -0.45
LEMD1-208ENST00000495594 COL16A1Q07092 1604 aaPredicted RBP12.25□□□□□ -0.45
LEMD1-208ENST00000495594 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.25□□□□□ -0.45
LEMD1-208ENST00000495594 ROCK1Q13464 1354 aa12.24□□□□□ -0.45
LEMD1-208ENST00000495594 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
LEMD1-208ENST00000495594 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
LEMD1-208ENST00000495594 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
LEMD1-208ENST00000495594 JCADQ9P266 1359 aa12.22□□□□□ -0.45
LEMD1-208ENST00000495594 KIF1BO60333 1816 aa12.22□□□□□ -0.45
LEMD1-208ENST00000495594 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
LEMD1-208ENST00000495594 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
LEMD1-208ENST00000495594 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
LEMD1-208ENST00000495594 DCCP43146 1447 aa12.19□□□□□ -0.46
LEMD1-208ENST00000495594 CHGAP10645 457 aaKnown RBP12.18□□□□□ -0.46
LEMD1-208ENST00000495594 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
LEMD1-208ENST00000495594 NHSL1Q5SYE7 1610 aa12.18□□□□□ -0.46
LEMD1-208ENST00000495594 NRXN3Q9Y4C0 1643 aa12.18□□□□□ -0.46
LEMD1-208ENST00000495594 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
LEMD1-208ENST00000495594 CADPS2Q86UW7 1296 aa12.17□□□□□ -0.46
LEMD1-208ENST00000495594 SLAIN2Q9P270 581 aa12.17□□□□□ -0.46
LEMD1-208ENST00000495594 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
LEMD1-208ENST00000495594 SPATA31A6Q5VVP1 1343 aa12.16□□□□□ -0.46
LEMD1-208ENST00000495594 ATF3P18847 181 aa12.15□□□□□ -0.46
LEMD1-208ENST00000495594 NUP155O75694 1391 aa12.15□□□□□ -0.46
LEMD1-208ENST00000495594 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
LEMD1-208ENST00000495594 NALCNQ8IZF0 1738 aa12.14□□□□□ -0.47
LEMD1-208ENST00000495594 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
LEMD1-208ENST00000495594 C19orf44Q9H6X5 657 aa12.13□□□□□ -0.47
LEMD1-208ENST00000495594 ASXL1Q8IXJ9 1541 aa12.12□□□□□ -0.47
LEMD1-208ENST00000495594 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
LEMD1-208ENST00000495594 POTEAQ6S8J7 498 aa12.12□□□□□ -0.47
LEMD1-208ENST00000495594 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
LEMD1-208ENST00000495594 LRP6O75581 1613 aa12.11□□□□□ -0.47
LEMD1-208ENST00000495594 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
LEMD1-208ENST00000495594 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
LEMD1-208ENST00000495594 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.47
LEMD1-208ENST00000495594 LAMC1P11047 1609 aa12.08□□□□□ -0.48
LEMD1-208ENST00000495594 PPLO60437 1756 aa12.08□□□□□ -0.48
LEMD1-208ENST00000495594 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
LEMD1-208ENST00000495594 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
LEMD1-208ENST00000495594 MST1RQ04912 1400 aa12.07□□□□□ -0.48
LEMD1-208ENST00000495594 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
LEMD1-208ENST00000495594 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
LEMD1-208ENST00000495594 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
LEMD1-208ENST00000495594 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
LEMD1-208ENST00000495594 ITGAEP38570 1179 aa12.05□□□□□ -0.48
LEMD1-208ENST00000495594 BRINP3Q76B58 766 aa12.05□□□□□ -0.48
LEMD1-208ENST00000495594 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
LEMD1-208ENST00000495594 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
LEMD1-208ENST00000495594 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
LEMD1-208ENST00000495594 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.49
LEMD1-208ENST00000495594 COL22A1Q8NFW1 1626 aaPredicted RBP12.01□□□□□ -0.49
LEMD1-208ENST00000495594 IFT172Q9UG01 1749 aa12.01□□□□□ -0.49
LEMD1-208ENST00000495594 LRRC59Q96AG4 307 aaKnown RBP12.01□□□□□ -0.49
LEMD1-208ENST00000495594 METP08581 1390 aa12.01□□□□□ -0.49
LEMD1-208ENST00000495594 NAIPQ13075 1403 aa12.01□□□□□ -0.49
LEMD1-208ENST00000495594 CDC42BPGQ6DT37 1551 aa12.01□□□□□ -0.49
LEMD1-208ENST00000495594 RXRBP28702 533 aa12□□□□□ -0.49
LEMD1-208ENST00000495594 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
LEMD1-208ENST00000495594 PNPLA6Q8IY17 1366 aa11.99□□□□□ -0.49
LEMD1-208ENST00000495594 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
LEMD1-208ENST00000495594 C1orf167Q5SNV9 1468 aa11.99□□□□□ -0.49
LEMD1-208ENST00000495594 AFF2P51816 1311 aa11.98□□□□□ -0.49
LEMD1-208ENST00000495594 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
LEMD1-208ENST00000495594 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
LEMD1-208ENST00000495594 VGFO15240 615 aaPredicted RBP11.98□□□□□ -0.49
LEMD1-208ENST00000495594 NUTM2AQ8IVF1 878 aaPredicted RBP11.98□□□□□ -0.49
LEMD1-208ENST00000495594 KIF1AQ12756 1690 aa11.97□□□□□ -0.49
LEMD1-208ENST00000495594 RPGRIP1LQ68CZ1 1315 aa11.97□□□□□ -0.49
LEMD1-208ENST00000495594 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
LEMD1-208ENST00000495594 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
LEMD1-208ENST00000495594 RGS12O14924 1447 aa11.95□□□□□ -0.5
LEMD1-208ENST00000495594 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
LEMD1-208ENST00000495594 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
LEMD1-208ENST00000495594 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
LEMD1-208ENST00000495594 NGLY1Q96IV0 654 aa11.93□□□□□ -0.5
LEMD1-208ENST00000495594 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
LEMD1-208ENST00000495594 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
LEMD1-208ENST00000495594 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms