RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 PNMA3Q9UL41 463 aa4.61□□□□□ -1.67
KCTD3-205ENST00000495537 C11orf95C9JLR9 678 aaPredicted RBP4.6□□□□□ -1.67
KCTD3-205ENST00000495537 V9GY48 417 aaPredicted RBP4.6□□□□□ -1.67
KCTD3-205ENST00000495537 GGCXP38435 758 aa4.6□□□□□ -1.67
KCTD3-205ENST00000495537 MTRQ99707 1265 aa4.59□□□□□ -1.67
KCTD3-205ENST00000495537 GRXCR2A6NFK2 248 aa4.59□□□□□ -1.67
KCTD3-205ENST00000495537 NRG2O14511 850 aaPredicted RBP4.59□□□□□ -1.67
KCTD3-205ENST00000495537 TRAF7Q6Q0C0 670 aa4.59□□□□□ -1.67
KCTD3-205ENST00000495537 IL27Q8NEV9 243 aa4.59□□□□□ -1.67
KCTD3-205ENST00000495537 PRKD2Q9BZL6 878 aa4.59□□□□□ -1.67
KCTD3-205ENST00000495537 SMAPO00193 183 aa4.59□□□□□ -1.68
KCTD3-205ENST00000495537 ABCC9O60706 1549 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 SLF2Q8IX21 1173 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 BCANQ96GW7 911 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 PRR14Q9BWN1 585 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.58□□□□□ -1.68
KCTD3-205ENST00000495537 RNF40O75150 1001 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 PPP1R18Q6NYC8 613 aa4.58□□□□□ -1.68
KCTD3-205ENST00000495537 NUDT18Q6ZVK8 323 aa4.57□□□□□ -1.68
KCTD3-205ENST00000495537 PODXL2Q9NZ53 605 aa4.57□□□□□ -1.68
KCTD3-205ENST00000495537 WASHC2AQ641Q2 1341 aa4.57□□□□□ -1.68
KCTD3-205ENST00000495537 FAM198AQ9UFP1 575 aa4.57□□□□□ -1.68
KCTD3-205ENST00000495537 NEFLP07196 543 aa4.56□□□□□ -1.68
KCTD3-205ENST00000495537 TMUB1Q9BVT8 246 aa4.56□□□□□ -1.68
KCTD3-205ENST00000495537 OSBPP22059 807 aa4.56□□□□□ -1.68
KCTD3-205ENST00000495537 NOP58Q9Y2X3 529 aaKnown RBP4.56□□□□□ -1.68
KCTD3-205ENST00000495537 WASHC2CQ9Y4E1 1318 aa4.56□□□□□ -1.68
KCTD3-205ENST00000495537 APLP1P51693 650 aa4.55□□□□□ -1.68
KCTD3-205ENST00000495537 CDK11AQ9UQ88 783 aaPredicted RBP4.55□□□□□ -1.68
KCTD3-205ENST00000495537 PRIM1P49642 420 aaKnown RBP4.54□□□□□ -1.68
KCTD3-205ENST00000495537 TTC13Q8NBP0 860 aa4.54□□□□□ -1.68
KCTD3-205ENST00000495537 RB1CC1Q8TDY2 1594 aa4.54□□□□□ -1.68
KCTD3-205ENST00000495537 ITGAEP38570 1179 aa4.54□□□□□ -1.68
KCTD3-205ENST00000495537 CDHR5Q9HBB8 845 aa4.54□□□□□ -1.68
KCTD3-205ENST00000495537 SWT1Q5T5J6 900 aaKnown RBP4.53□□□□□ -1.68
KCTD3-205ENST00000495537 ZNF516Q92618 1163 aa4.53□□□□□ -1.68
KCTD3-205ENST00000495537 PDZRN3Q9UPQ7 1066 aa4.53□□□□□ -1.68
KCTD3-205ENST00000495537 PADI6Q6TGC4 694 aa4.53□□□□□ -1.68
KCTD3-205ENST00000495537 RSPH6AQ9H0K4 717 aa4.53□□□□□ -1.68
KCTD3-205ENST00000495537 C3orf80F5H4A9 247 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 PAXIP1Q6ZW49 1069 aaPredicted RBP4.52□□□□□ -1.69
KCTD3-205ENST00000495537 CFAP44Q96MT7 982 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 CEP162Q5TB80 1403 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 ZPR1O75312 459 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 USP35Q9P2H5 1018 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 COPS2P61201 443 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 ZMYND15Q9H091 742 aa4.52□□□□□ -1.69
KCTD3-205ENST00000495537 NACADO15069 1562 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 AMER1Q5JTC6 1135 aaPredicted RBP4.51□□□□□ -1.69
KCTD3-205ENST00000495537 PCDHB3Q9Y5E6 796 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 RSF1Q96T23 1441 aaPredicted RBP4.51□□□□□ -1.69
KCTD3-205ENST00000495537 CCER2I3L3R5 266 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 GLIPR1L2Q4G1C9 344 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 ZNF787Q6DD87 383 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 EYA1Q99502 592 aa4.51□□□□□ -1.69
KCTD3-205ENST00000495537 RTN4Q9NQC3 1192 aaKnown RBP4.51□□□□□ -1.69
KCTD3-205ENST00000495537 NPDC1Q9NQX5 325 aaPredicted RBP4.51□□□□□ -1.69
KCTD3-205ENST00000495537 LCE2BO14633 110 aa4.5□□□□□ -1.69
KCTD3-205ENST00000495537 DNAJB2P25686 324 aa4.5□□□□□ -1.69
KCTD3-205ENST00000495537 KMT5BQ4FZB7 885 aa4.5□□□□□ -1.69
KCTD3-205ENST00000495537 RTL5Q5HYW3 569 aaPredicted RBP4.5□□□□□ -1.69
KCTD3-205ENST00000495537 NKX2-3Q8TAU0 364 aa4.5□□□□□ -1.69
KCTD3-205ENST00000495537 RBM46Q8TBY0 533 aaKnown RBP4.5□□□□□ -1.69
KCTD3-205ENST00000495537 DHX57Q6P158 1386 aaKnown RBP4.5□□□□□ -1.69
KCTD3-205ENST00000495537 TNIKQ9UKE5 1360 aa4.5□□□□□ -1.69
KCTD3-205ENST00000495537 ARHGEF1Q92888 912 aaKnown RBP4.49□□□□□ -1.69
KCTD3-205ENST00000495537 EIF4G1Q04637 1599 aaKnown RBP4.49□□□□□ -1.69
KCTD3-205ENST00000495537 SLC19A1P41440 591 aa4.49□□□□□ -1.69
KCTD3-205ENST00000495537 IPO9Q96P70 1041 aaKnown RBP4.49□□□□□ -1.69
KCTD3-205ENST00000495537 EEA1Q15075 1411 aa4.48□□□□□ -1.69
KCTD3-205ENST00000495537 DGAT1O75907 488 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 ANKLE1Q8NAG6 615 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 PPP4R2Q9NY27 417 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 CUX2O14529 1486 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 ACTN4O43707 911 aaKnown RBP4.47□□□□□ -1.69
KCTD3-205ENST00000495537 PKDCCQ504Y2 493 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 RSPH4AQ5TD94 716 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 BLOC1S3Q6QNY0 202 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 NCAPD3P42695 1498 aa4.47□□□□□ -1.69
KCTD3-205ENST00000495537 RNF223E7ERA6 249 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 NR1I2O75469 434 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PRR20EP86478 221 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PRR20CP86479 221 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PRR20DP86480 221 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PRR20BP86481 221 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PRR20AP86496 221 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 ZNF598Q86UK7 904 aaKnown RBP4.46□□□□□ -1.69
KCTD3-205ENST00000495537 FAM43AQ8N2R8 423 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 TMEM134Q9H6X4 195 aa4.46□□□□□ -1.69
KCTD3-205ENST00000495537 PTGDRQ13258 359 aa4.46□□□□□ -1.7
KCTD3-205ENST00000495537 PPP1R15AO75807 674 aaPredicted RBP4.45□□□□□ -1.7
KCTD3-205ENST00000495537 SPRYD7Q5W111 196 aa4.45□□□□□ -1.7
KCTD3-205ENST00000495537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.45□□□□□ -1.7
KCTD3-205ENST00000495537 BRPF3Q9ULD4 1205 aa4.45□□□□□ -1.7
KCTD3-205ENST00000495537 ADGRG1Q9Y653 693 aa4.45□□□□□ -1.7
KCTD3-205ENST00000495537 ADH1BP00325 375 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 CFHP08603 1231 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 FGD1P98174 961 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 VSIG10Q8N0Z9 540 aa4.44□□□□□ -1.7
KCTD3-205ENST00000495537 RCCD1A6NED2 376 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms