RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
LINC01558-202ENST00000495520 KIF1BO60333 1816 aa28.01■■■□□ 2.07
LINC01558-202ENST00000495520 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
LINC01558-202ENST00000495520 IDI1Q13907 227 aa27.99■■■□□ 2.07
LINC01558-202ENST00000495520 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
LINC01558-202ENST00000495520 TNRQ92752 1358 aa27.96■■■□□ 2.07
LINC01558-202ENST00000495520 ANP32CO43423 234 aa27.95■■■□□ 2.07
LINC01558-202ENST00000495520 ADGRB3O60242 1522 aa27.95■■■□□ 2.07
LINC01558-202ENST00000495520 MYOM2P54296 1465 aa27.95■■■□□ 2.07
LINC01558-202ENST00000495520 ST20-MTHFSA0A0A6YYL1 179 aa27.94■■■□□ 2.06
LINC01558-202ENST00000495520 CCER2I3L3R5 266 aa27.94■■■□□ 2.06
LINC01558-202ENST00000495520 CENPBP07199 599 aaPredicted RBP27.91■■■□□ 2.06
LINC01558-202ENST00000495520 IFT172Q9UG01 1749 aa27.89■■■□□ 2.06
LINC01558-202ENST00000495520 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
LINC01558-202ENST00000495520 STAG3Q9UJ98 1225 aa27.89■■■□□ 2.06
LINC01558-202ENST00000495520 KIAA1210Q9ULL0 1709 aa27.88■■■□□ 2.05
LINC01558-202ENST00000495520 TMEM131LA2VDJ0 1609 aa27.87■■■□□ 2.05
LINC01558-202ENST00000495520 RPGRIP1LQ68CZ1 1315 aa27.86■■■□□ 2.05
LINC01558-202ENST00000495520 PTPRMP28827 1452 aa27.85■■■□□ 2.05
LINC01558-202ENST00000495520 MYO5BQ9ULV0 1848 aa27.84■■■□□ 2.05
LINC01558-202ENST00000495520 YTHDC1Q96MU7 727 aaKnown RBP27.82■■■□□ 2.04
LINC01558-202ENST00000495520 NLRP1Q9C000 1473 aa27.82■■■□□ 2.04
LINC01558-202ENST00000495520 TESK2Q96S53 571 aa27.81■■■□□ 2.04
LINC01558-202ENST00000495520 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
LINC01558-202ENST00000495520 IQGAP1P46940 1657 aa27.79■■■□□ 2.04
LINC01558-202ENST00000495520 A2ML1A8K2U0 1454 aa27.79■■■□□ 2.04
LINC01558-202ENST00000495520 MYO3AQ8NEV4 1616 aa27.79■■■□□ 2.04
LINC01558-202ENST00000495520 SCAF11Q99590 1463 aaKnown RBP27.78■■■□□ 2.04
LINC01558-202ENST00000495520 PPLO60437 1756 aa27.78■■■□□ 2.04
LINC01558-202ENST00000495520 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
LINC01558-202ENST00000495520 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
LINC01558-202ENST00000495520 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
LINC01558-202ENST00000495520 KDM4FA0A1W2PPD8 638 aa27.75■■■□□ 2.03
LINC01558-202ENST00000495520 KDM5AP29375 1690 aaKnown RBP27.73■■■□□ 2.03
LINC01558-202ENST00000495520 PIK3C2GO75747 1445 aa27.72■■■□□ 2.03
LINC01558-202ENST00000495520 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
LINC01558-202ENST00000495520 PRKRIP1Q9H875 184 aaPredicted RBP27.71■■■□□ 2.03
LINC01558-202ENST00000495520 ZFYVE9O95405 1425 aa27.7■■■□□ 2.02
LINC01558-202ENST00000495520 VGFO15240 615 aaPredicted RBP27.69■■■□□ 2.02
LINC01558-202ENST00000495520 CEP170BQ9Y4F5 1589 aaPredicted RBP27.69■■■□□ 2.02
LINC01558-202ENST00000495520 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
LINC01558-202ENST00000495520 RIMS2Q9UQ26 1411 aa27.69■■■□□ 2.02
LINC01558-202ENST00000495520 C14orf93Q9H972 538 aaKnown RBP27.68■■■□□ 2.02
LINC01558-202ENST00000495520 DISP3Q9P2K9 1392 aa27.67■■■□□ 2.02
LINC01558-202ENST00000495520 TMF1P82094 1093 aa27.65■■■□□ 2.02
LINC01558-202ENST00000495520 EIF3AQ14152 1382 aaKnown RBP27.65■■■□□ 2.02
LINC01558-202ENST00000495520 TMEM2Q9UHN6 1383 aa27.65■■■□□ 2.02
LINC01558-202ENST00000495520 SETD1BQ9UPS6 1966 aaKnown RBP27.65■■■□□ 2.02
LINC01558-202ENST00000495520 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
LINC01558-202ENST00000495520 ZNF142P52746 1687 aaPredicted RBP27.63■■■□□ 2.01
LINC01558-202ENST00000495520 POLR3GLQ9BT43 218 aa27.63■■■□□ 2.01
LINC01558-202ENST00000495520 THEMISQ8N1K5 641 aaPredicted RBP27.62■■■□□ 2.01
LINC01558-202ENST00000495520 ADGRB1O14514 1584 aa27.61■■■□□ 2.01
LINC01558-202ENST00000495520 HDGFP51858 240 aaKnown RBP27.6■■■□□ 2.01
LINC01558-202ENST00000495520 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.6■■■□□ 2.01
LINC01558-202ENST00000495520 SLC24A1O60721 1099 aa27.59■■■□□ 2.01
LINC01558-202ENST00000495520 SLIT1O75093 1534 aa27.57■■■□□ 2
LINC01558-202ENST00000495520 ARHGAP23Q9P227 1491 aa27.55■■■□□ 2
LINC01558-202ENST00000495520 SBNO2Q9Y2G9 1366 aa27.55■■■□□ 2
LINC01558-202ENST00000495520 TXNDC2Q86VQ3 553 aa27.55■■■□□ 2
LINC01558-202ENST00000495520 EID1Q9Y6B2 187 aa27.55■■■□□ 2
LINC01558-202ENST00000495520 CDCA8Q53HL2 280 aa27.54■■■□□ 2
LINC01558-202ENST00000495520 LTKP29376 864 aa27.53■■■□□ 2
LINC01558-202ENST00000495520 PER1O15534 1290 aaPredicted RBP27.52■■■□□ 2
LINC01558-202ENST00000495520 KTN1Q86UP2 1357 aaKnown RBP27.51■■□□□ 1.99
LINC01558-202ENST00000495520 BCANQ96GW7 911 aa27.5■■□□□ 1.99
LINC01558-202ENST00000495520 CCDC184Q52MB2 194 aa27.48■■□□□ 1.99
LINC01558-202ENST00000495520 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
LINC01558-202ENST00000495520 TMEM132EQ6IEE7 984 aa27.46■■□□□ 1.99
LINC01558-202ENST00000495520 PLEKHG1Q9ULL1 1385 aa27.46■■□□□ 1.99
LINC01558-202ENST00000495520 NRXN3Q9Y4C0 1643 aa27.46■■□□□ 1.99
LINC01558-202ENST00000495520 SCAF1Q9H7N4 1312 aaKnown RBP27.45■■□□□ 1.99
LINC01558-202ENST00000495520 CENPJQ9HC77 1338 aaPredicted RBP27.45■■□□□ 1.98
LINC01558-202ENST00000495520 RALBP1Q15311 655 aa27.44■■□□□ 1.98
LINC01558-202ENST00000495520 ANKLE2Q86XL3 938 aa27.43■■□□□ 1.98
LINC01558-202ENST00000495520 PANK3Q9H999 370 aa27.43■■□□□ 1.98
LINC01558-202ENST00000495520 ASXL1Q8IXJ9 1541 aa27.4■■□□□ 1.98
LINC01558-202ENST00000495520 TRAK1Q9UPV9 953 aa27.4■■□□□ 1.98
LINC01558-202ENST00000495520 MRS2Q9HD23 443 aa27.4■■□□□ 1.98
LINC01558-202ENST00000495520 SETD1AO15047 1707 aaKnown RBP27.39■■□□□ 1.97
LINC01558-202ENST00000495520 PARD3Q8TEW0 1356 aa27.39■■□□□ 1.97
LINC01558-202ENST00000495520 ADAMTS13Q76LX8 1427 aa27.38■■□□□ 1.97
LINC01558-202ENST00000495520 LMTK3Q96Q04 1460 aa27.37■■□□□ 1.97
LINC01558-202ENST00000495520 HSPA2P54652 639 aa27.36■■□□□ 1.97
LINC01558-202ENST00000495520 SLC26A8Q96RN1 970 aa27.36■■□□□ 1.97
LINC01558-202ENST00000495520 MYOM1P52179 1685 aa27.35■■□□□ 1.97
LINC01558-202ENST00000495520 STK26Q9P289 416 aa27.35■■□□□ 1.97
LINC01558-202ENST00000495520 ARHGEF28Q8N1W1 1705 aaKnown RBP27.34■■□□□ 1.97
LINC01558-202ENST00000495520 MYBBP1AQ9BQG0 1328 aaKnown RBP27.34■■□□□ 1.97
LINC01558-202ENST00000495520 PUS7Q96PZ0 661 aaKnown RBP27.34■■□□□ 1.97
LINC01558-202ENST00000495520 METP08581 1390 aa27.34■■□□□ 1.97
LINC01558-202ENST00000495520 QRICH2Q9H0J4 1663 aa27.34■■□□□ 1.97
LINC01558-202ENST00000495520 YTHDC2Q9H6S0 1430 aaKnown RBP27.33■■□□□ 1.97
LINC01558-202ENST00000495520 NCKAP5LQ9HCH0 1330 aa27.33■■□□□ 1.97
LINC01558-202ENST00000495520 BRD4O60885 1362 aaPredicted RBP27.32■■□□□ 1.96
LINC01558-202ENST00000495520 MED14O60244 1454 aa27.31■■□□□ 1.96
LINC01558-202ENST00000495520 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
LINC01558-202ENST00000495520 NPHP4O75161 1426 aaPredicted RBP27.29■■□□□ 1.96
LINC01558-202ENST00000495520 NPC1L1Q9UHC9 1359 aa27.29■■□□□ 1.96
LINC01558-202ENST00000495520 DIP2AQ14689 1571 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms