RNA–Protein interactions for RNA: ENST00000495406.1

CDK5RAP2-219, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 635 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-219ENST00000495406 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
CDK5RAP2-219ENST00000495406 C14orf37Q86TY3 774 aa16.49■□□□□ 0.23
CDK5RAP2-219ENST00000495406 NOS1P29475 1434 aa16.48■□□□□ 0.23
CDK5RAP2-219ENST00000495406 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP2-219ENST00000495406 ADGRB3O60242 1522 aa16.47■□□□□ 0.23
CDK5RAP2-219ENST00000495406 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP2-219ENST00000495406 FAM50AQ14320 339 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP2-219ENST00000495406 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
CDK5RAP2-219ENST00000495406 JCADQ9P266 1359 aa16.46■□□□□ 0.23
CDK5RAP2-219ENST00000495406 MEX3CQ5U5Q3 659 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP2-219ENST00000495406 NWD1Q149M9 1564 aa16.44■□□□□ 0.22
CDK5RAP2-219ENST00000495406 PLEKHG1Q9ULL1 1385 aa16.43■□□□□ 0.22
CDK5RAP2-219ENST00000495406 RIMS2Q9UQ26 1411 aa16.43■□□□□ 0.22
CDK5RAP2-219ENST00000495406 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP2-219ENST00000495406 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK5RAP2-219ENST00000495406 TBX22Q9Y458 520 aa16.42■□□□□ 0.22
CDK5RAP2-219ENST00000495406 CHD2O14647 1828 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP2-219ENST00000495406 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
CDK5RAP2-219ENST00000495406 ATF3P18847 181 aa16.41■□□□□ 0.22
CDK5RAP2-219ENST00000495406 ANKRD50Q9ULJ7 1429 aa16.41■□□□□ 0.22
CDK5RAP2-219ENST00000495406 RPRD2Q5VT52 1461 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP2-219ENST00000495406 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
CDK5RAP2-219ENST00000495406 CADPS2Q86UW7 1296 aa16.4■□□□□ 0.22
CDK5RAP2-219ENST00000495406 GCC2Q8IWJ2 1684 aa16.4■□□□□ 0.22
CDK5RAP2-219ENST00000495406 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP2-219ENST00000495406 ZNF772Q68DY9 489 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP2-219ENST00000495406 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
CDK5RAP2-219ENST00000495406 SPATA31A6Q5VVP1 1343 aa16.39■□□□□ 0.21
CDK5RAP2-219ENST00000495406 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
CDK5RAP2-219ENST00000495406 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
CDK5RAP2-219ENST00000495406 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
CDK5RAP2-219ENST00000495406 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
CDK5RAP2-219ENST00000495406 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-219ENST00000495406 NUTM2BA6NNL0 878 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-219ENST00000495406 NUTM2EB1AL46 878 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-219ENST00000495406 NUTM2AQ8IVF1 878 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-219ENST00000495406 AMOTL2Q9Y2J4 779 aa16.34■□□□□ 0.21
CDK5RAP2-219ENST00000495406 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.21
CDK5RAP2-219ENST00000495406 RXRBP28702 533 aa16.33■□□□□ 0.2
CDK5RAP2-219ENST00000495406 LRP6O75581 1613 aa16.32■□□□□ 0.2
CDK5RAP2-219ENST00000495406 UPF1Q92900 1129 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDK5RAP2-219ENST00000495406 ADAMTS13Q76LX8 1427 aa16.31■□□□□ 0.2
CDK5RAP2-219ENST00000495406 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
CDK5RAP2-219ENST00000495406 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
CDK5RAP2-219ENST00000495406 DIP2AQ14689 1571 aa16.29■□□□□ 0.2
CDK5RAP2-219ENST00000495406 E9PCH4 1651 aa16.28■□□□□ 0.2
CDK5RAP2-219ENST00000495406 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP2-219ENST00000495406 TRPM2O94759 1503 aa16.28■□□□□ 0.2
CDK5RAP2-219ENST00000495406 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
CDK5RAP2-219ENST00000495406 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP2-219ENST00000495406 NUP155O75694 1391 aa16.26■□□□□ 0.19
CDK5RAP2-219ENST00000495406 UNC13BO14795 1591 aa16.26■□□□□ 0.19
CDK5RAP2-219ENST00000495406 ITGAEP38570 1179 aa16.26■□□□□ 0.19
CDK5RAP2-219ENST00000495406 AFF2P51816 1311 aa16.25■□□□□ 0.19
CDK5RAP2-219ENST00000495406 LRRC59Q96AG4 307 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP2-219ENST00000495406 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
CDK5RAP2-219ENST00000495406 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
CDK5RAP2-219ENST00000495406 QTRT2Q9H974 415 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP2-219ENST00000495406 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
CDK5RAP2-219ENST00000495406 IQGAP3Q86VI3 1631 aa16.22■□□□□ 0.19
CDK5RAP2-219ENST00000495406 DCCP43146 1447 aa16.21■□□□□ 0.19
CDK5RAP2-219ENST00000495406 ASXL1Q8IXJ9 1541 aa16.2■□□□□ 0.18
CDK5RAP2-219ENST00000495406 DDX17Q92841 729 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP2-219ENST00000495406 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
CDK5RAP2-219ENST00000495406 MST1RQ04912 1400 aa16.19■□□□□ 0.18
CDK5RAP2-219ENST00000495406 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP2-219ENST00000495406 METP08581 1390 aa16.18■□□□□ 0.18
CDK5RAP2-219ENST00000495406 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP2-219ENST00000495406 NGLY1Q96IV0 654 aa16.18■□□□□ 0.18
CDK5RAP2-219ENST00000495406 ADAMTS2O95450 1211 aa16.16■□□□□ 0.18
CDK5RAP2-219ENST00000495406 XRN1Q8IZH2 1706 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP2-219ENST00000495406 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
CDK5RAP2-219ENST00000495406 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
CDK5RAP2-219ENST00000495406 NRXN3Q9Y4C0 1643 aa16.15■□□□□ 0.18
CDK5RAP2-219ENST00000495406 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
CDK5RAP2-219ENST00000495406 PNPLA6Q8IY17 1366 aa16.13■□□□□ 0.17
CDK5RAP2-219ENST00000495406 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
CDK5RAP2-219ENST00000495406 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP2-219ENST00000495406 RGS12O14924 1447 aa16.11■□□□□ 0.17
CDK5RAP2-219ENST00000495406 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
CDK5RAP2-219ENST00000495406 USP21Q9UK80 565 aa16.1■□□□□ 0.17
CDK5RAP2-219ENST00000495406 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
CDK5RAP2-219ENST00000495406 NALCNQ8IZF0 1738 aa16.08■□□□□ 0.17
CDK5RAP2-219ENST00000495406 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP2-219ENST00000495406 FOXD1Q16676 465 aa16.07■□□□□ 0.16
CDK5RAP2-219ENST00000495406 TRPC5Q9UL62 973 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP2-219ENST00000495406 KIF1BO60333 1816 aa16.06■□□□□ 0.16
CDK5RAP2-219ENST00000495406 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
CDK5RAP2-219ENST00000495406 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
CDK5RAP2-219ENST00000495406 CLTCL1P53675 1640 aa16.05■□□□□ 0.16
CDK5RAP2-219ENST00000495406 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP2-219ENST00000495406 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
CDK5RAP2-219ENST00000495406 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
CDK5RAP2-219ENST00000495406 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
CDK5RAP2-219ENST00000495406 FNBP4Q8N3X1 1017 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP2-219ENST00000495406 PTCH1Q13635 1447 aa16.02■□□□□ 0.15
CDK5RAP2-219ENST00000495406 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
CDK5RAP2-219ENST00000495406 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
CDK5RAP2-219ENST00000495406 LAMC1P11047 1609 aa15.99■□□□□ 0.15
CDK5RAP2-219ENST00000495406 FOXO3O43524 673 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms