RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
HDLBP-245ENST00000494862 ILDR1Q86SU0 546 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-245ENST00000494862 MADDQ8WXG6 1647 aa16.05■□□□□ 0.16
HDLBP-245ENST00000494862 ARID4BQ4LE39 1312 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-245ENST00000494862 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
HDLBP-245ENST00000494862 SLC52A1Q9NWF4 448 aa16.04■□□□□ 0.16
HDLBP-245ENST00000494862 SIGLEC1Q9BZZ2 1709 aa16.03■□□□□ 0.16
HDLBP-245ENST00000494862 SYNMO15061 1565 aa16.03■□□□□ 0.16
HDLBP-245ENST00000494862 PIK3C2BO00750 1634 aa16.02■□□□□ 0.16
HDLBP-245ENST00000494862 KIF7Q2M1P5 1343 aa16.02■□□□□ 0.16
HDLBP-245ENST00000494862 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
HDLBP-245ENST00000494862 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
HDLBP-245ENST00000494862 MROH2AA6NES4 1674 aa16■□□□□ 0.15
HDLBP-245ENST00000494862 ERVK-7P63135 1459 aa16■□□□□ 0.15
HDLBP-245ENST00000494862 NRXN1Q9ULB1 1477 aa16■□□□□ 0.15
HDLBP-245ENST00000494862 MLECQ14165 292 aa16■□□□□ 0.15
HDLBP-245ENST00000494862 PREX1Q8TCU6 1659 aa15.99■□□□□ 0.15
HDLBP-245ENST00000494862 IDI1Q13907 227 aa15.99■□□□□ 0.15
HDLBP-245ENST00000494862 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
HDLBP-245ENST00000494862 ANP32CO43423 234 aa15.98■□□□□ 0.15
HDLBP-245ENST00000494862 IFT172Q9UG01 1749 aa15.98■□□□□ 0.15
HDLBP-245ENST00000494862 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
HDLBP-245ENST00000494862 CFAP65Q6ZU64 1925 aaKnown RBP15.98■□□□□ 0.15
HDLBP-245ENST00000494862 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-245ENST00000494862 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-245ENST00000494862 ESF1Q9H501 851 aaKnown RBP15.97■□□□□ 0.15
HDLBP-245ENST00000494862 CLTCQ00610 1675 aaKnown RBP15.97■□□□□ 0.15
HDLBP-245ENST00000494862 SPATA31D1Q6ZQQ2 1576 aa15.95■□□□□ 0.14
HDLBP-245ENST00000494862 SCAF11Q99590 1463 aaKnown RBP15.94■□□□□ 0.14
HDLBP-245ENST00000494862 ZMYM3Q14202 1370 aa15.93■□□□□ 0.14
HDLBP-245ENST00000494862 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
HDLBP-245ENST00000494862 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
HDLBP-245ENST00000494862 ZFYVE9O95405 1425 aa15.93■□□□□ 0.14
HDLBP-245ENST00000494862 PPLO60437 1756 aa15.92■□□□□ 0.14
HDLBP-245ENST00000494862 VGFO15240 615 aaPredicted RBP15.92■□□□□ 0.14
HDLBP-245ENST00000494862 TESK2Q96S53 571 aa15.92■□□□□ 0.14
HDLBP-245ENST00000494862 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
HDLBP-245ENST00000494862 NEXMIFQ5QGS0 1516 aa15.92■□□□□ 0.14
HDLBP-245ENST00000494862 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
HDLBP-245ENST00000494862 IQGAP1P46940 1657 aa15.91■□□□□ 0.14
HDLBP-245ENST00000494862 TMEM131LA2VDJ0 1609 aa15.9■□□□□ 0.14
HDLBP-245ENST00000494862 EIF3AQ14152 1382 aaKnown RBP15.9■□□□□ 0.14
HDLBP-245ENST00000494862 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
HDLBP-245ENST00000494862 TMF1P82094 1093 aa15.89■□□□□ 0.13
HDLBP-245ENST00000494862 POLR3GLQ9BT43 218 aa15.89■□□□□ 0.13
HDLBP-245ENST00000494862 SLC24A1O60721 1099 aa15.86■□□□□ 0.13
HDLBP-245ENST00000494862 CENPBP07199 599 aaPredicted RBP15.86■□□□□ 0.13
HDLBP-245ENST00000494862 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
HDLBP-245ENST00000494862 TNRQ92752 1358 aa15.86■□□□□ 0.13
HDLBP-245ENST00000494862 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
HDLBP-245ENST00000494862 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
HDLBP-245ENST00000494862 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
HDLBP-245ENST00000494862 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
HDLBP-245ENST00000494862 ADGRB1O14514 1584 aa15.83■□□□□ 0.13
HDLBP-245ENST00000494862 CDCA8Q53HL2 280 aa15.83■□□□□ 0.12
HDLBP-245ENST00000494862 NUTM2DQ5VT03 806 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-245ENST00000494862 PRKRIP1Q9H875 184 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-245ENST00000494862 MYO5BQ9ULV0 1848 aa15.8■□□□□ 0.12
HDLBP-245ENST00000494862 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
HDLBP-245ENST00000494862 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
HDLBP-245ENST00000494862 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
HDLBP-245ENST00000494862 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDLBP-245ENST00000494862 MYO3AQ8NEV4 1616 aa15.79■□□□□ 0.12
HDLBP-245ENST00000494862 CENPJQ9HC77 1338 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-245ENST00000494862 ZBTB22O15209 634 aa15.77■□□□□ 0.12
HDLBP-245ENST00000494862 HDGFP51858 240 aaKnown RBP15.77■□□□□ 0.12
HDLBP-245ENST00000494862 TRAK1Q9UPV9 953 aa15.77■□□□□ 0.12
HDLBP-245ENST00000494862 NLRP1Q9C000 1473 aa15.77■□□□□ 0.11
HDLBP-245ENST00000494862 KDM5AP29375 1690 aaKnown RBP15.76■□□□□ 0.11
HDLBP-245ENST00000494862 CEBPAP49715 358 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-245ENST00000494862 FER1L4A9Z1Z3 1794 aa15.74■□□□□ 0.11
HDLBP-245ENST00000494862 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
HDLBP-245ENST00000494862 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
HDLBP-245ENST00000494862 ALKQ9UM73 1620 aa15.73■□□□□ 0.11
HDLBP-245ENST00000494862 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
HDLBP-245ENST00000494862 PANK3Q9H999 370 aa15.73■□□□□ 0.11
HDLBP-245ENST00000494862 C3P01024 1663 aa15.73■□□□□ 0.11
HDLBP-245ENST00000494862 TMEM2Q9UHN6 1383 aa15.72■□□□□ 0.11
HDLBP-245ENST00000494862 RALBP1Q15311 655 aa15.71■□□□□ 0.11
HDLBP-245ENST00000494862 YTHDC2Q9H6S0 1430 aaKnown RBP15.7■□□□□ 0.1
HDLBP-245ENST00000494862 PUS7Q96PZ0 661 aaKnown RBP15.7■□□□□ 0.1
HDLBP-245ENST00000494862 UBR1Q8IWV7 1749 aa15.7■□□□□ 0.1
HDLBP-245ENST00000494862 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
HDLBP-245ENST00000494862 PTPRMP28827 1452 aa15.68■□□□□ 0.1
HDLBP-245ENST00000494862 LRPPRCP42704 1394 aaKnown RBP15.68■□□□□ 0.1
HDLBP-245ENST00000494862 STK26Q9P289 416 aa15.68■□□□□ 0.1
HDLBP-245ENST00000494862 ARHGEF28Q8N1W1 1705 aaKnown RBP15.68■□□□□ 0.1
HDLBP-245ENST00000494862 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
HDLBP-245ENST00000494862 MRS2Q9HD23 443 aa15.67■□□□□ 0.1
HDLBP-245ENST00000494862 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
HDLBP-245ENST00000494862 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
HDLBP-245ENST00000494862 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
HDLBP-245ENST00000494862 PARD3Q8TEW0 1356 aa15.65■□□□□ 0.1
HDLBP-245ENST00000494862 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
HDLBP-245ENST00000494862 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
HDLBP-245ENST00000494862 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
HDLBP-245ENST00000494862 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
HDLBP-245ENST00000494862 PLEKHG1Q9ULL1 1385 aa15.64■□□□□ 0.09
HDLBP-245ENST00000494862 ADAMTSL3P82987 1691 aa15.64■□□□□ 0.09
HDLBP-245ENST00000494862 SETD1AO15047 1707 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms