RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 TMEM134Q9H6X4 195 aa12.37□□□□□ -0.43
NCL-210ENST00000494618 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
NCL-210ENST00000494618 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
NCL-210ENST00000494618 RNF40O75150 1001 aa12.35□□□□□ -0.43
NCL-210ENST00000494618 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
NCL-210ENST00000494618 PPP4CP60510 307 aa12.34□□□□□ -0.43
NCL-210ENST00000494618 HPS5Q9UPZ3 1129 aa12.34□□□□□ -0.43
NCL-210ENST00000494618 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
NCL-210ENST00000494618 AK7Q96M32 723 aa12.32□□□□□ -0.44
NCL-210ENST00000494618 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
NCL-210ENST00000494618 NYAP1Q6ZVC0 841 aa12.31□□□□□ -0.44
NCL-210ENST00000494618 DAXXQ9UER7 740 aaPredicted RBP12.31□□□□□ -0.44
NCL-210ENST00000494618 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
NCL-210ENST00000494618 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
NCL-210ENST00000494618 SULF1Q8IWU6 871 aa12.27□□□□□ -0.45
NCL-210ENST00000494618 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
NCL-210ENST00000494618 CLCN1P35523 988 aa12.26□□□□□ -0.45
NCL-210ENST00000494618 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
NCL-210ENST00000494618 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
NCL-210ENST00000494618 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
NCL-210ENST00000494618 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
NCL-210ENST00000494618 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
NCL-210ENST00000494618 TRIM66O15016 1216 aa12.23□□□□□ -0.45
NCL-210ENST00000494618 AMHR2Q16671 573 aa12.23□□□□□ -0.45
NCL-210ENST00000494618 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
NCL-210ENST00000494618 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
NCL-210ENST00000494618 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
NCL-210ENST00000494618 SLC10A3P09131 477 aa12.19□□□□□ -0.46
NCL-210ENST00000494618 CFHP08603 1231 aa12.17□□□□□ -0.46
NCL-210ENST00000494618 APLP1P51693 650 aa12.16□□□□□ -0.46
NCL-210ENST00000494618 PDE4DQ08499 809 aa12.16□□□□□ -0.46
NCL-210ENST00000494618 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
NCL-210ENST00000494618 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
NCL-210ENST00000494618 ACTN4O43707 911 aaKnown RBP12.13□□□□□ -0.47
NCL-210ENST00000494618 CD46P15529 392 aa12.13□□□□□ -0.47
NCL-210ENST00000494618 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
NCL-210ENST00000494618 GIGYF2Q6Y7W6 1299 aaKnown RBP12.13□□□□□ -0.47
NCL-210ENST00000494618 REPIN1Q9BWE0 567 aaKnown RBP12.13□□□□□ -0.47
NCL-210ENST00000494618 GCGRP47871 477 aa12.12□□□□□ -0.47
NCL-210ENST00000494618 PARP9Q8IXQ6 854 aa12.12□□□□□ -0.47
NCL-210ENST00000494618 PCDHB3Q9Y5E6 796 aa12.12□□□□□ -0.47
NCL-210ENST00000494618 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
NCL-210ENST00000494618 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
NCL-210ENST00000494618 ITGBL1O95965 494 aaPredicted RBP12.07□□□□□ -0.48
NCL-210ENST00000494618 KCNC4Q03721 635 aa12.07□□□□□ -0.48
NCL-210ENST00000494618 MTRQ99707 1265 aa12.07□□□□□ -0.48
NCL-210ENST00000494618 IL21Q9HBE4 155 aa12.07□□□□□ -0.48
NCL-210ENST00000494618 KDM4AO75164 1064 aa12.05□□□□□ -0.48
NCL-210ENST00000494618 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
NCL-210ENST00000494618 COPS2P61201 443 aa12.05□□□□□ -0.48
NCL-210ENST00000494618 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
NCL-210ENST00000494618 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
NCL-210ENST00000494618 USP46P62068 366 aa12.04□□□□□ -0.48
NCL-210ENST00000494618 FUT2Q10981 343 aa12.04□□□□□ -0.48
NCL-210ENST00000494618 NR1I2O75469 434 aa12.03□□□□□ -0.48
NCL-210ENST00000494618 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
NCL-210ENST00000494618 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
NCL-210ENST00000494618 BLOC1S3Q6QNY0 202 aa12.03□□□□□ -0.48
NCL-210ENST00000494618 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
NCL-210ENST00000494618 MS4A1P11836 297 aa12.01□□□□□ -0.49
NCL-210ENST00000494618 DIXDC1Q155Q3 683 aa12.01□□□□□ -0.49
NCL-210ENST00000494618 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
NCL-210ENST00000494618 ZPR1O75312 459 aa12□□□□□ -0.49
NCL-210ENST00000494618 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
NCL-210ENST00000494618 MORN1Q5T089 497 aa11.98□□□□□ -0.49
NCL-210ENST00000494618 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
NCL-210ENST00000494618 ZNF516Q92618 1163 aa11.98□□□□□ -0.49
NCL-210ENST00000494618 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
NCL-210ENST00000494618 GPBP1L1Q9HC44 474 aaPredicted RBP11.98□□□□□ -0.49
NCL-210ENST00000494618 HOXA2O43364 376 aa11.95□□□□□ -0.5
NCL-210ENST00000494618 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
NCL-210ENST00000494618 SLC27A5Q9Y2P5 690 aa11.94□□□□□ -0.5
NCL-210ENST00000494618 Q3C1V9 767 aa11.93□□□□□ -0.5
NCL-210ENST00000494618 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
NCL-210ENST00000494618 FMNL1O95466 1100 aaPredicted RBP11.92□□□□□ -0.5
NCL-210ENST00000494618 TBC1D2Q9BYX2 928 aa11.92□□□□□ -0.5
NCL-210ENST00000494618 RSPH6AQ9H0K4 717 aa11.91□□□□□ -0.5
NCL-210ENST00000494618 SALL2Q9Y467 1007 aaPredicted RBP11.91□□□□□ -0.5
NCL-210ENST00000494618 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
NCL-210ENST00000494618 NKX2-3Q8TAU0 364 aa11.9□□□□□ -0.5
NCL-210ENST00000494618 SPSB2Q99619 263 aa11.9□□□□□ -0.5
NCL-210ENST00000494618 ADH1BP00325 375 aa11.89□□□□□ -0.51
NCL-210ENST00000494618 FDX1P10109 184 aa11.89□□□□□ -0.51
NCL-210ENST00000494618 GGCXP38435 758 aa11.89□□□□□ -0.51
NCL-210ENST00000494618 A0A0G2JS52 829 aa11.88□□□□□ -0.51
NCL-210ENST00000494618 MOXD2PA6NHM9 499 aa11.88□□□□□ -0.51
NCL-210ENST00000494618 TLL1O43897 1013 aa11.88□□□□□ -0.51
NCL-210ENST00000494618 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
NCL-210ENST00000494618 GJA5P36382 358 aa11.87□□□□□ -0.51
NCL-210ENST00000494618 HLA-CQ95604 372 aa11.87□□□□□ -0.51
NCL-210ENST00000494618 NDUFV2P19404 249 aa11.86□□□□□ -0.51
NCL-210ENST00000494618 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
NCL-210ENST00000494618 BRICD5Q6PL45 260 aa11.86□□□□□ -0.51
NCL-210ENST00000494618 THAP11Q96EK4 314 aa11.86□□□□□ -0.51
NCL-210ENST00000494618 MYSM1Q5VVJ2 828 aa11.84□□□□□ -0.51
NCL-210ENST00000494618 PPP1R18Q6NYC8 613 aa11.84□□□□□ -0.51
NCL-210ENST00000494618 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
NCL-210ENST00000494618 SLC6A16Q9GZN6 736 aa11.84□□□□□ -0.51
NCL-210ENST00000494618 RSBN1LQ6PCB5 846 aaPredicted RBP11.83□□□□□ -0.52
NCL-210ENST00000494618 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms