RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
HSPG2-212ENST00000493940 EID1Q9Y6B2 187 aa19.17■□□□□ 0.66
HSPG2-212ENST00000493940 HSPA1LP34931 641 aa19.16■□□□□ 0.66
HSPG2-212ENST00000493940 SLC26A8Q96RN1 970 aa19.15■□□□□ 0.66
HSPG2-212ENST00000493940 PIP4K2BP78356 416 aa19.13■□□□□ 0.65
HSPG2-212ENST00000493940 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
HSPG2-212ENST00000493940 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
HSPG2-212ENST00000493940 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
HSPG2-212ENST00000493940 RIMS2Q9UQ26 1411 aa19.12■□□□□ 0.65
HSPG2-212ENST00000493940 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
HSPG2-212ENST00000493940 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
HSPG2-212ENST00000493940 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
HSPG2-212ENST00000493940 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
HSPG2-212ENST00000493940 KIF1BO60333 1816 aa19.07■□□□□ 0.64
HSPG2-212ENST00000493940 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
HSPG2-212ENST00000493940 KCNA6P17658 529 aa19.05■□□□□ 0.64
HSPG2-212ENST00000493940 TRIM52Q96A61 297 aa19.05■□□□□ 0.64
HSPG2-212ENST00000493940 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
HSPG2-212ENST00000493940 NRXN3Q9Y4C0 1643 aa19.04■□□□□ 0.64
HSPG2-212ENST00000493940 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
HSPG2-212ENST00000493940 TRPM2O94759 1503 aa19.03■□□□□ 0.64
HSPG2-212ENST00000493940 FOXD1Q16676 465 aa19.02■□□□□ 0.64
HSPG2-212ENST00000493940 BCANQ96GW7 911 aa19.02■□□□□ 0.64
HSPG2-212ENST00000493940 MED1Q15648 1581 aaPredicted RBP19.01■□□□□ 0.63
HSPG2-212ENST00000493940 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
HSPG2-212ENST00000493940 TMEM94Q12767 1356 aa19■□□□□ 0.63
HSPG2-212ENST00000493940 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
HSPG2-212ENST00000493940 TBX22Q9Y458 520 aa18.99■□□□□ 0.63
HSPG2-212ENST00000493940 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
HSPG2-212ENST00000493940 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
HSPG2-212ENST00000493940 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
HSPG2-212ENST00000493940 PTPRUQ92729 1446 aa18.98■□□□□ 0.63
HSPG2-212ENST00000493940 HDGFP51858 240 aaKnown RBP18.97■□□□□ 0.63
HSPG2-212ENST00000493940 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
HSPG2-212ENST00000493940 PPLO60437 1756 aa18.94■□□□□ 0.62
HSPG2-212ENST00000493940 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
HSPG2-212ENST00000493940 NKTRP30414 1462 aaKnown RBP18.94■□□□□ 0.62
HSPG2-212ENST00000493940 DIP2AQ14689 1571 aa18.93■□□□□ 0.62
HSPG2-212ENST00000493940 SETBP1Q9Y6X0 1596 aa18.93■□□□□ 0.62
HSPG2-212ENST00000493940 MPHOSPH9Q99550 1183 aa18.93■□□□□ 0.62
HSPG2-212ENST00000493940 SETD1AO15047 1707 aaKnown RBP18.93■□□□□ 0.62
HSPG2-212ENST00000493940 ROBO1Q9Y6N7 1651 aa18.9■□□□□ 0.62
HSPG2-212ENST00000493940 XRN1Q8IZH2 1706 aaKnown RBP18.9■□□□□ 0.62
HSPG2-212ENST00000493940 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-212ENST00000493940 METP08581 1390 aa18.9■□□□□ 0.62
HSPG2-212ENST00000493940 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
HSPG2-212ENST00000493940 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
HSPG2-212ENST00000493940 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
HSPG2-212ENST00000493940 IFT172Q9UG01 1749 aa18.87■□□□□ 0.61
HSPG2-212ENST00000493940 RAB3GAP2Q9H2M9 1393 aa18.86■□□□□ 0.61
HSPG2-212ENST00000493940 FAM135BQ49AJ0 1406 aa18.85■□□□□ 0.61
HSPG2-212ENST00000493940 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.6
HSPG2-212ENST00000493940 MSH6P52701 1360 aa18.82■□□□□ 0.6
HSPG2-212ENST00000493940 RGS17Q9UGC6 210 aaPredicted RBP18.82■□□□□ 0.6
HSPG2-212ENST00000493940 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
HSPG2-212ENST00000493940 SLAIN2Q9P270 581 aa18.81■□□□□ 0.6
HSPG2-212ENST00000493940 NCOA3Q9Y6Q9 1424 aa18.8■□□□□ 0.6
HSPG2-212ENST00000493940 NALCNQ8IZF0 1738 aa18.8■□□□□ 0.6
HSPG2-212ENST00000493940 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
HSPG2-212ENST00000493940 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
HSPG2-212ENST00000493940 PHLPP1O60346 1717 aa18.79■□□□□ 0.6
HSPG2-212ENST00000493940 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
HSPG2-212ENST00000493940 VGFO15240 615 aaPredicted RBP18.78■□□□□ 0.6
HSPG2-212ENST00000493940 C19orf44Q9H6X5 657 aa18.77■□□□□ 0.6
HSPG2-212ENST00000493940 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
HSPG2-212ENST00000493940 ROBO2Q9HCK4 1378 aa18.74■□□□□ 0.59
HSPG2-212ENST00000493940 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-212ENST00000493940 ASXL1Q8IXJ9 1541 aa18.72■□□□□ 0.59
HSPG2-212ENST00000493940 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
HSPG2-212ENST00000493940 ATF3P18847 181 aa18.7■□□□□ 0.58
HSPG2-212ENST00000493940 MST1RQ04912 1400 aa18.7■□□□□ 0.58
HSPG2-212ENST00000493940 CADPS2Q86UW7 1296 aa18.7■□□□□ 0.58
HSPG2-212ENST00000493940 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
HSPG2-212ENST00000493940 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
HSPG2-212ENST00000493940 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
HSPG2-212ENST00000493940 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
HSPG2-212ENST00000493940 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
HSPG2-212ENST00000493940 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 DCCP43146 1447 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 HRCP23327 699 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 DDX17Q92841 729 aaKnown RBP18.66■□□□□ 0.58
HSPG2-212ENST00000493940 NHSL1Q5SYE7 1610 aa18.66■□□□□ 0.58
HSPG2-212ENST00000493940 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
HSPG2-212ENST00000493940 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
HSPG2-212ENST00000493940 KNDC1Q76NI1 1749 aa18.64■□□□□ 0.57
HSPG2-212ENST00000493940 STK26Q9P289 416 aa18.64■□□□□ 0.57
HSPG2-212ENST00000493940 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
HSPG2-212ENST00000493940 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
HSPG2-212ENST00000493940 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
HSPG2-212ENST00000493940 RGPD8O14715 1765 aaPredicted RBP18.62■□□□□ 0.57
HSPG2-212ENST00000493940 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
HSPG2-212ENST00000493940 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
HSPG2-212ENST00000493940 MYOM2P54296 1465 aa18.6■□□□□ 0.57
HSPG2-212ENST00000493940 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
HSPG2-212ENST00000493940 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
HSPG2-212ENST00000493940 JCADQ9P266 1359 aa18.59■□□□□ 0.57
HSPG2-212ENST00000493940 ORAI2Q96SN7 254 aa18.59■□□□□ 0.57
HSPG2-212ENST00000493940 LRP6O75581 1613 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms