RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
SNRNP200-207ENST00000493271 CHIC2Q9UKJ5 165 aa17.13■□□□□ 0.33
SNRNP200-207ENST00000493271 PLEKHG1Q9ULL1 1385 aa17.11■□□□□ 0.33
SNRNP200-207ENST00000493271 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
SNRNP200-207ENST00000493271 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
SNRNP200-207ENST00000493271 BCANQ96GW7 911 aa17.1■□□□□ 0.33
SNRNP200-207ENST00000493271 ZFYVE9O95405 1425 aa17.09■□□□□ 0.33
SNRNP200-207ENST00000493271 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
SNRNP200-207ENST00000493271 JCADQ9P266 1359 aa17.07■□□□□ 0.32
SNRNP200-207ENST00000493271 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRNP200-207ENST00000493271 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
SNRNP200-207ENST00000493271 TBX22Q9Y458 520 aa17.06■□□□□ 0.32
SNRNP200-207ENST00000493271 RIMS2Q9UQ26 1411 aa17.05■□□□□ 0.32
SNRNP200-207ENST00000493271 POTEAQ6S8J7 498 aa17.05■□□□□ 0.32
SNRNP200-207ENST00000493271 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
SNRNP200-207ENST00000493271 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
SNRNP200-207ENST00000493271 TMEM131LA2VDJ0 1609 aa17.04■□□□□ 0.32
SNRNP200-207ENST00000493271 DIP2AQ14689 1571 aa17.04■□□□□ 0.32
SNRNP200-207ENST00000493271 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
SNRNP200-207ENST00000493271 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
SNRNP200-207ENST00000493271 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-207ENST00000493271 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
SNRNP200-207ENST00000493271 UNC13BO14795 1591 aa17.02■□□□□ 0.32
SNRNP200-207ENST00000493271 SPATA31A6Q5VVP1 1343 aa17.01■□□□□ 0.31
SNRNP200-207ENST00000493271 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
SNRNP200-207ENST00000493271 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
SNRNP200-207ENST00000493271 ROCK1Q13464 1354 aa16.99■□□□□ 0.31
SNRNP200-207ENST00000493271 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
SNRNP200-207ENST00000493271 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
SNRNP200-207ENST00000493271 C19orf44Q9H6X5 657 aa16.98■□□□□ 0.31
SNRNP200-207ENST00000493271 ADAMTS13Q76LX8 1427 aa16.97■□□□□ 0.31
SNRNP200-207ENST00000493271 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.31
SNRNP200-207ENST00000493271 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
SNRNP200-207ENST00000493271 ATF3P18847 181 aa16.96■□□□□ 0.31
SNRNP200-207ENST00000493271 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.3
SNRNP200-207ENST00000493271 TRPM2O94759 1503 aa16.96■□□□□ 0.3
SNRNP200-207ENST00000493271 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-207ENST00000493271 DCCP43146 1447 aa16.95■□□□□ 0.3
SNRNP200-207ENST00000493271 E9PCH4 1651 aa16.94■□□□□ 0.3
SNRNP200-207ENST00000493271 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
SNRNP200-207ENST00000493271 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
SNRNP200-207ENST00000493271 MEX3CQ5U5Q3 659 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-207ENST00000493271 LRP6O75581 1613 aa16.9■□□□□ 0.3
SNRNP200-207ENST00000493271 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
SNRNP200-207ENST00000493271 NUP155O75694 1391 aa16.89■□□□□ 0.3
SNRNP200-207ENST00000493271 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
SNRNP200-207ENST00000493271 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
SNRNP200-207ENST00000493271 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
SNRNP200-207ENST00000493271 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
SNRNP200-207ENST00000493271 PTPRUQ92729 1446 aa16.86■□□□□ 0.29
SNRNP200-207ENST00000493271 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
SNRNP200-207ENST00000493271 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
SNRNP200-207ENST00000493271 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
SNRNP200-207ENST00000493271 ASXL1Q8IXJ9 1541 aa16.84■□□□□ 0.29
SNRNP200-207ENST00000493271 RXRBP28702 533 aa16.83■□□□□ 0.28
SNRNP200-207ENST00000493271 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
SNRNP200-207ENST00000493271 NRXN3Q9Y4C0 1643 aa16.82■□□□□ 0.28
SNRNP200-207ENST00000493271 MST1RQ04912 1400 aa16.82■□□□□ 0.28
SNRNP200-207ENST00000493271 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNRNP200-207ENST00000493271 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SNRNP200-207ENST00000493271 NHSL1Q5SYE7 1610 aa16.81■□□□□ 0.28
SNRNP200-207ENST00000493271 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
SNRNP200-207ENST00000493271 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
SNRNP200-207ENST00000493271 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-207ENST00000493271 METP08581 1390 aa16.77■□□□□ 0.28
SNRNP200-207ENST00000493271 AFF2P51816 1311 aa16.77■□□□□ 0.28
SNRNP200-207ENST00000493271 NUTM2BA6NNL0 878 aaPredicted RBP16.77■□□□□ 0.28
SNRNP200-207ENST00000493271 NUTM2EB1AL46 878 aaPredicted RBP16.77■□□□□ 0.28
SNRNP200-207ENST00000493271 NUTM2AQ8IVF1 878 aaPredicted RBP16.77■□□□□ 0.28
SNRNP200-207ENST00000493271 ITGAEP38570 1179 aa16.75■□□□□ 0.27
SNRNP200-207ENST00000493271 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
SNRNP200-207ENST00000493271 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
SNRNP200-207ENST00000493271 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
SNRNP200-207ENST00000493271 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
SNRNP200-207ENST00000493271 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
SNRNP200-207ENST00000493271 LAMC1P11047 1609 aa16.72■□□□□ 0.27
SNRNP200-207ENST00000493271 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
SNRNP200-207ENST00000493271 NALCNQ8IZF0 1738 aa16.72■□□□□ 0.27
SNRNP200-207ENST00000493271 VGFO15240 615 aaPredicted RBP16.71■□□□□ 0.27
SNRNP200-207ENST00000493271 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
SNRNP200-207ENST00000493271 C1orf167Q5SNV9 1468 aa16.71■□□□□ 0.27
SNRNP200-207ENST00000493271 KIF1BO60333 1816 aa16.7■□□□□ 0.26
SNRNP200-207ENST00000493271 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
SNRNP200-207ENST00000493271 QTRT2Q9H974 415 aaKnown RBP16.69■□□□□ 0.26
SNRNP200-207ENST00000493271 RGS12O14924 1447 aa16.69■□□□□ 0.26
SNRNP200-207ENST00000493271 RPGRIP1LQ68CZ1 1315 aa16.69■□□□□ 0.26
SNRNP200-207ENST00000493271 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
SNRNP200-207ENST00000493271 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
SNRNP200-207ENST00000493271 NAIPQ13075 1403 aa16.65■□□□□ 0.26
SNRNP200-207ENST00000493271 FOXD1Q16676 465 aa16.65■□□□□ 0.26
SNRNP200-207ENST00000493271 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
SNRNP200-207ENST00000493271 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
SNRNP200-207ENST00000493271 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
SNRNP200-207ENST00000493271 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.25
SNRNP200-207ENST00000493271 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
SNRNP200-207ENST00000493271 ADAMTS2O95450 1211 aa16.62■□□□□ 0.25
SNRNP200-207ENST00000493271 USP21Q9UK80 565 aa16.62■□□□□ 0.25
SNRNP200-207ENST00000493271 COL22A1Q8NFW1 1626 aaPredicted RBP16.62■□□□□ 0.25
SNRNP200-207ENST00000493271 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
SNRNP200-207ENST00000493271 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms