RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 HSPA2P54652 639 aa19.96■□□□□ 0.79
PDZRN3-210ENST00000492909 MYOM2P54296 1465 aa19.96■□□□□ 0.79
PDZRN3-210ENST00000492909 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
PDZRN3-210ENST00000492909 STAG3Q9UJ98 1225 aa19.93■□□□□ 0.78
PDZRN3-210ENST00000492909 NEXMIFQ5QGS0 1516 aa19.91■□□□□ 0.78
PDZRN3-210ENST00000492909 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
PDZRN3-210ENST00000492909 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-210ENST00000492909 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
PDZRN3-210ENST00000492909 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
PDZRN3-210ENST00000492909 A2ML1A8K2U0 1454 aa19.89■□□□□ 0.78
PDZRN3-210ENST00000492909 NLRP1Q9C000 1473 aa19.89■□□□□ 0.78
PDZRN3-210ENST00000492909 NRXN1Q9ULB1 1477 aa19.89■□□□□ 0.78
PDZRN3-210ENST00000492909 KIAA1210Q9ULL0 1709 aa19.89■□□□□ 0.77
PDZRN3-210ENST00000492909 ZNF142P52746 1687 aaPredicted RBP19.89■□□□□ 0.77
PDZRN3-210ENST00000492909 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
PDZRN3-210ENST00000492909 LAMC1P11047 1609 aa19.87■□□□□ 0.77
PDZRN3-210ENST00000492909 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
PDZRN3-210ENST00000492909 CARD11Q9BXL7 1154 aa19.87■□□□□ 0.77
PDZRN3-210ENST00000492909 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
PDZRN3-210ENST00000492909 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
PDZRN3-210ENST00000492909 HSPA5P11021 654 aaKnown RBP19.85■□□□□ 0.77
PDZRN3-210ENST00000492909 ZFYVE9O95405 1425 aa19.85■□□□□ 0.77
PDZRN3-210ENST00000492909 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
PDZRN3-210ENST00000492909 USP47Q96K76 1375 aa19.84■□□□□ 0.77
PDZRN3-210ENST00000492909 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
PDZRN3-210ENST00000492909 NBPF1Q3BBV0 1214 aa19.84■□□□□ 0.77
PDZRN3-210ENST00000492909 DIEXFQ68CQ4 756 aaKnown RBP19.82■□□□□ 0.76
PDZRN3-210ENST00000492909 NUTM2DQ5VT03 806 aaPredicted RBP19.81■□□□□ 0.76
PDZRN3-210ENST00000492909 RIMS2Q9UQ26 1411 aa19.8■□□□□ 0.76
PDZRN3-210ENST00000492909 THEMISQ8N1K5 641 aaPredicted RBP19.8■□□□□ 0.76
PDZRN3-210ENST00000492909 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
PDZRN3-210ENST00000492909 NCKAP5LQ9HCH0 1330 aa19.78■□□□□ 0.76
PDZRN3-210ENST00000492909 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
PDZRN3-210ENST00000492909 IQGAP1P46940 1657 aa19.77■□□□□ 0.76
PDZRN3-210ENST00000492909 HDGFP51858 240 aaKnown RBP19.77■□□□□ 0.76
PDZRN3-210ENST00000492909 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDZRN3-210ENST00000492909 C14orf93Q9H972 538 aaKnown RBP19.77■□□□□ 0.76
PDZRN3-210ENST00000492909 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
PDZRN3-210ENST00000492909 STRCQ7RTU9 1775 aa19.76■□□□□ 0.75
PDZRN3-210ENST00000492909 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
PDZRN3-210ENST00000492909 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
PDZRN3-210ENST00000492909 ST20-MTHFSA0A0A6YYL1 179 aa19.72■□□□□ 0.75
PDZRN3-210ENST00000492909 LTKP29376 864 aa19.72■□□□□ 0.75
PDZRN3-210ENST00000492909 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
PDZRN3-210ENST00000492909 SLIT1O75093 1534 aa19.72■□□□□ 0.75
PDZRN3-210ENST00000492909 ADGRB1O14514 1584 aa19.72■□□□□ 0.75
PDZRN3-210ENST00000492909 ANKLE2Q86XL3 938 aa19.71■□□□□ 0.75
PDZRN3-210ENST00000492909 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
PDZRN3-210ENST00000492909 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
PDZRN3-210ENST00000492909 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
PDZRN3-210ENST00000492909 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
PDZRN3-210ENST00000492909 NRXN3Q9Y4C0 1643 aa19.68■□□□□ 0.74
PDZRN3-210ENST00000492909 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
PDZRN3-210ENST00000492909 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
PDZRN3-210ENST00000492909 SETD1AO15047 1707 aaKnown RBP19.66■□□□□ 0.74
PDZRN3-210ENST00000492909 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
PDZRN3-210ENST00000492909 WASHC2AQ641Q2 1341 aa19.66■□□□□ 0.74
PDZRN3-210ENST00000492909 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
PDZRN3-210ENST00000492909 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
PDZRN3-210ENST00000492909 CCDC7Q96M83 1385 aa19.64■□□□□ 0.73
PDZRN3-210ENST00000492909 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.73
PDZRN3-210ENST00000492909 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
PDZRN3-210ENST00000492909 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
PDZRN3-210ENST00000492909 BCANQ96GW7 911 aa19.62■□□□□ 0.73
PDZRN3-210ENST00000492909 TESK2Q96S53 571 aa19.62■□□□□ 0.73
PDZRN3-210ENST00000492909 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
PDZRN3-210ENST00000492909 ARHGEF28Q8N1W1 1705 aaKnown RBP19.61■□□□□ 0.73
PDZRN3-210ENST00000492909 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
PDZRN3-210ENST00000492909 MED14O60244 1454 aa19.61■□□□□ 0.73
PDZRN3-210ENST00000492909 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
PDZRN3-210ENST00000492909 YTHDC2Q9H6S0 1430 aaKnown RBP19.6■□□□□ 0.73
PDZRN3-210ENST00000492909 SLC26A8Q96RN1 970 aa19.58■□□□□ 0.73
PDZRN3-210ENST00000492909 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.72
PDZRN3-210ENST00000492909 CENPJQ9HC77 1338 aaPredicted RBP19.57■□□□□ 0.72
PDZRN3-210ENST00000492909 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
PDZRN3-210ENST00000492909 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
PDZRN3-210ENST00000492909 TMF1P82094 1093 aa19.57■□□□□ 0.72
PDZRN3-210ENST00000492909 STK26Q9P289 416 aa19.57■□□□□ 0.72
PDZRN3-210ENST00000492909 SBNO2Q9Y2G9 1366 aa19.56■□□□□ 0.72
PDZRN3-210ENST00000492909 DIP2AQ14689 1571 aa19.55■□□□□ 0.72
PDZRN3-210ENST00000492909 METP08581 1390 aa19.55■□□□□ 0.72
PDZRN3-210ENST00000492909 LRPPRCP42704 1394 aaKnown RBP19.55■□□□□ 0.72
PDZRN3-210ENST00000492909 DISP3Q9P2K9 1392 aa19.55■□□□□ 0.72
PDZRN3-210ENST00000492909 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
PDZRN3-210ENST00000492909 POLR3GLQ9BT43 218 aa19.54■□□□□ 0.72
PDZRN3-210ENST00000492909 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
PDZRN3-210ENST00000492909 KNDC1Q76NI1 1749 aa19.53■□□□□ 0.72
PDZRN3-210ENST00000492909 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
PDZRN3-210ENST00000492909 ABCC11Q96J66 1382 aa19.52■□□□□ 0.72
PDZRN3-210ENST00000492909 TBX22Q9Y458 520 aa19.52■□□□□ 0.71
PDZRN3-210ENST00000492909 CDCA8Q53HL2 280 aa19.51■□□□□ 0.71
PDZRN3-210ENST00000492909 TECPR2O15040 1411 aa19.49■□□□□ 0.71
PDZRN3-210ENST00000492909 PRAM1Q96QH2 718 aa19.48■□□□□ 0.71
PDZRN3-210ENST00000492909 POGKQ9P215 609 aa19.48■□□□□ 0.71
PDZRN3-210ENST00000492909 CPS1P31327 1500 aa19.48■□□□□ 0.71
PDZRN3-210ENST00000492909 SAFB2Q14151 953 aaKnown RBP eCLIP19.45■□□□□ 0.7
PDZRN3-210ENST00000492909 FAM135BQ49AJ0 1406 aa19.45■□□□□ 0.7
PDZRN3-210ENST00000492909 SIRT1Q96EB6 747 aa19.44■□□□□ 0.7
PDZRN3-210ENST00000492909 PIK3R4Q99570 1358 aa19.44■□□□□ 0.7
PDZRN3-210ENST00000492909 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 433.8 ms