RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 FGD1P98174 961 aa26.14■■□□□ 1.78
CHKB-CPT1B-203ENST00000492556 BCAR3O75815 825 aa26.14■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 PHF14O94880 888 aa26.14■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 RPRD2Q5VT52 1461 aaKnown RBP26.13■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 PDZRN3Q9UPQ7 1066 aa26.12■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 EPRSP07814 1512 aaKnown RBP26.12■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 EVC2Q86UK5 1308 aa26.11■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 NINLQ9Y2I6 1382 aa26.1■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 BICRAQ9NZM4 1560 aa26.1■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 ABCA10Q8WWZ4 1543 aa26.09■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 TROQ12816 1431 aaPredicted RBP26.08■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 TRIM6-TRIM34B2RNG4 842 aa26.08■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 KIF16BQ96L93 1317 aa26.08■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 ERBINQ96RT1 1412 aa26.08■■□□□ 1.77
CHKB-CPT1B-203ENST00000492556 DNMBPQ6XZF7 1577 aa26.08■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 SOX12O15370 315 aa26.07■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 FOXD4L5Q5VV16 416 aaPredicted RBP26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 TCP11L2Q8N4U5 519 aa26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 FOXD4L4Q8WXT5 416 aaPredicted RBP26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 LNPKQ9C0E8 428 aa26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 ELL2O00472 640 aaPredicted RBP26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 NOL8Q76FK4 1167 aaKnown RBP26.06■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 NUTM2DQ5VT03 806 aaPredicted RBP26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 STK31Q9BXU1 1019 aa26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 CDK13Q14004 1512 aaKnown RBP26.05■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 CDK11BP21127 795 aaKnown RBP26.04■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 CSPP1Q1MSJ5 1256 aa26.04■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 RIPK4P57078 832 aa26.04■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 NUCB2P80303 420 aa26.03■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 SKAP1Q86WV1 359 aa26.03■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 SLFN5Q08AF3 891 aa26.03■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 PTPRKQ15262 1439 aa26.02■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 C20orf194Q5TEA3 1177 aa26.02■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 ABCC5O15440 1437 aa26.02■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 SLC4A10Q6U841 1118 aa26.02■■□□□ 1.76
CHKB-CPT1B-203ENST00000492556 CUL7Q14999 1698 aa26.01■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 PLEKHG5O94827 1062 aa26.01■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 PRKCSHP14314 528 aaPredicted RBP26.01■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 REC8O95072 547 aa26■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 DIAPH1O60610 1272 aaKnown RBP26■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 HDGFP51858 240 aaKnown RBP25.99■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.99■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 ISY1Q9ULR0 285 aaKnown RBP25.98■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 NASPP49321 788 aaPredicted RBP25.98■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 API5Q9BZZ5 524 aaKnown RBP25.98■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 NAP1L2Q9ULW6 460 aaPredicted RBP25.98■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 SCAPERQ9BY12 1400 aa25.98■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 VGFO15240 615 aaPredicted RBP25.97■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 MTHFSP49914 203 aa25.96■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 HTATSF1O43719 755 aaKnown RBP25.96■■□□□ 1.75
CHKB-CPT1B-203ENST00000492556 MCM4P33991 863 aa25.95■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 MCTP1Q6DN14 999 aa25.95■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 FAM13BQ9NYF5 915 aa25.95■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 NESP48681 1621 aa25.95■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 INTS3Q68E01 1043 aaKnown RBP25.93■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 CDC45O75419 566 aa25.92■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 TPM2P07951 284 aa25.92■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 WDR63Q8IWG1 891 aa25.91■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 GRPEL1Q9HAV7 217 aa25.9■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 CC2D2AQ9P2K1 1620 aa25.9■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 ATP6V1DQ9Y5K8 247 aa25.9■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 RILPL2Q969X0 211 aa25.89■■□□□ 1.74
CHKB-CPT1B-203ENST00000492556 EXOSC9Q06265 439 aaKnown RBP25.88■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 MVPQ14764 893 aaKnown RBP25.88■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 CCDC173Q0VFZ6 552 aa25.88■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 CHMP4AQ9BY43 222 aa25.88■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 FOXD4L6Q3SYB3 417 aaPredicted RBP25.87■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 FOXD4L3Q6VB84 417 aaPredicted RBP25.87■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 CAMSAP2Q08AD1 1489 aa25.87■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 GNAI1P63096 354 aa25.86■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 CT47B1P0C2W7 299 aaPredicted RBP25.86■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 GPATCH3Q96I76 525 aa25.86■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 DUSP27Q5VZP5 1158 aa25.85■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 ARHGAP5Q13017 1502 aa25.85■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 MINK1Q8N4C8 1332 aaPredicted RBP25.84■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 WWC1Q8IX03 1113 aa25.83■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 MAP7D2Q96T17 732 aa25.83■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 R3HCC1Q9Y3T6 440 aaKnown RBP25.83■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 NKTRP30414 1462 aaKnown RBP25.83■■□□□ 1.73
CHKB-CPT1B-203ENST00000492556 CIZ1Q9ULV3 898 aaPredicted RBP25.82■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 TAOK2Q9UL54 1235 aa25.82■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 ESPNB1AK53 854 aa25.81■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 GCC1Q96CN9 775 aa25.81■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 GGNBP2Q9H3C7 697 aa25.81■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 CCDC39Q9UFE4 941 aa25.81■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 CAVIN1Q6NZI2 390 aaKnown RBP25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 HDAC5Q9UQL6 1122 aa25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 NOB1Q9ULX3 412 aaKnown RBP25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 UGGT2Q9NYU1 1516 aa25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 RABEP1Q15276 862 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms