RNA–Protein interactions for RNA: ENST00000492552.5

NR1D2-205, Transcript of nuclear receptor subfamily 1 group D member 2, human

TSL 2

Gene NR1D2, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1D2-205	ENST00000492552	CEBPA	P49715	358 aa	Predicted RBP	32.57	■■■□□ 2.8
NR1D2-205	ENST00000492552	NRXN1	Q9ULB1	1477 aa		32.56	■■■□□ 2.8
NR1D2-205	ENST00000492552	PPL	O60437	1756 aa		32.54	■■■□□ 2.8
NR1D2-205	ENST00000492552	VGF	O15240	615 aa	Predicted RBP	32.54	■■■□□ 2.8
NR1D2-205	ENST00000492552	NEXMIF	Q5QGS0	1516 aa		32.54	■■■□□ 2.8
NR1D2-205	ENST00000492552	PLPPR3	Q6T4P5	718 aa		32.52	■■■□□ 2.8
NR1D2-205	ENST00000492552	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.52	■■■□□ 2.8
NR1D2-205	ENST00000492552	LAMC1	P11047	1609 aa		32.5	■■■□□ 2.79
NR1D2-205	ENST00000492552	CFAP70	Q5T0N1	1121 aa		32.49	■■■□□ 2.79
NR1D2-205	ENST00000492552	A2ML1	A8K2U0	1454 aa		32.49	■■■□□ 2.79
NR1D2-205	ENST00000492552	C3	P01024	1663 aa		32.49	■■■□□ 2.79
NR1D2-205	ENST00000492552	PIK3C2G	O75747	1445 aa		32.49	■■■□□ 2.79
NR1D2-205	ENST00000492552	MYO5B	Q9ULV0	1848 aa		32.46	■■■□□ 2.79
NR1D2-205	ENST00000492552	ST20-MTHFS	A0A0A6YYL1	179 aa		32.46	■■■□□ 2.79
NR1D2-205	ENST00000492552	KIAA1210	Q9ULL0	1709 aa		32.46	■■■□□ 2.79
NR1D2-205	ENST00000492552	DDX10	Q13206	875 aa	Known RBP	32.45	■■■□□ 2.79
NR1D2-205	ENST00000492552	ZFYVE9	O95405	1425 aa		32.45	■■■□□ 2.79
NR1D2-205	ENST00000492552	WASHC2A	Q641Q2	1341 aa		32.43	■■■□□ 2.78
NR1D2-205	ENST00000492552	NLRP1	Q9C000	1473 aa		32.42	■■■□□ 2.78
NR1D2-205	ENST00000492552	C14orf93	Q9H972	538 aa	Known RBP	32.41	■■■□□ 2.78
NR1D2-205	ENST00000492552	C11orf95	C9JLR9	678 aa	Predicted RBP	32.41	■■■□□ 2.78
NR1D2-205	ENST00000492552	RIMS1	Q86UR5	1692 aa	Known RBP	32.4	■■■□□ 2.78
NR1D2-205	ENST00000492552	ADAMTSL3	P82987	1691 aa		32.39	■■■□□ 2.78
NR1D2-205	ENST00000492552	SCAF11	Q99590	1463 aa	Known RBP	32.38	■■■□□ 2.77
NR1D2-205	ENST00000492552	RIMS2	Q9UQ26	1411 aa		32.38	■■■□□ 2.77
NR1D2-205	ENST00000492552	CCDC7	Q96M83	1385 aa		32.37	■■■□□ 2.77
NR1D2-205	ENST00000492552	KIF7	Q2M1P5	1343 aa		32.35	■■■□□ 2.77
NR1D2-205	ENST00000492552	SETBP1	Q9Y6X0	1596 aa		32.33	■■■□□ 2.77
NR1D2-205	ENST00000492552	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.32	■■■□□ 2.77
NR1D2-205	ENST00000492552	SENP3	Q9H4L4	574 aa	Predicted RBP	32.32	■■■□□ 2.77
NR1D2-205	ENST00000492552	KDM5A	P29375	1690 aa	Known RBP	32.32	■■■□□ 2.76
NR1D2-205	ENST00000492552	EIF3A	Q14152	1382 aa	Known RBP	32.32	■■■□□ 2.76
NR1D2-205	ENST00000492552	IQGAP1	P46940	1657 aa		32.31	■■■□□ 2.76
NR1D2-205	ENST00000492552	HDGF	P51858	240 aa	Known RBP	32.31	■■■□□ 2.76
NR1D2-205	ENST00000492552	UBR1	Q8IWV7	1749 aa		32.3	■■■□□ 2.76
NR1D2-205	ENST00000492552	TMEM132E	Q6IEE7	984 aa		32.28	■■■□□ 2.76
NR1D2-205	ENST00000492552	TMEM2	Q9UHN6	1383 aa		32.28	■■■□□ 2.76
NR1D2-205	ENST00000492552	ADGRB1	O14514	1584 aa		32.27	■■■□□ 2.76
NR1D2-205	ENST00000492552	POLR3GL	Q9BT43	218 aa		32.27	■■■□□ 2.76
NR1D2-205	ENST00000492552	TESK2	Q96S53	571 aa		32.26	■■■□□ 2.75
NR1D2-205	ENST00000492552	MIER1	Q8N108	512 aa		32.25	■■■□□ 2.75
NR1D2-205	ENST00000492552	MYO3A	Q8NEV4	1616 aa		32.24	■■■□□ 2.75
NR1D2-205	ENST00000492552	POLR1A	O95602	1720 aa	Predicted RBP	32.23	■■■□□ 2.75
NR1D2-205	ENST00000492552	TRAK1	Q9UPV9	953 aa		32.21	■■■□□ 2.75
NR1D2-205	ENST00000492552	TMF1	P82094	1093 aa		32.19	■■■□□ 2.74
NR1D2-205	ENST00000492552	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.19	■■■□□ 2.74
NR1D2-205	ENST00000492552	ALK	Q9UM73	1620 aa		32.18	■■■□□ 2.74
NR1D2-205	ENST00000492552	PTPRM	P28827	1452 aa		32.16	■■■□□ 2.74
NR1D2-205	ENST00000492552	EID1	Q9Y6B2	187 aa		32.16	■■■□□ 2.74
NR1D2-205	ENST00000492552	DISP3	Q9P2K9	1392 aa		32.15	■■■□□ 2.74
NR1D2-205	ENST00000492552	BCAN	Q96GW7	911 aa		32.15	■■■□□ 2.74
NR1D2-205	ENST00000492552	ASXL1	Q8IXJ9	1541 aa		32.15	■■■□□ 2.74
NR1D2-205	ENST00000492552	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.15	■■■□□ 2.74
NR1D2-205	ENST00000492552	TXNDC2	Q86VQ3	553 aa		32.14	■■■□□ 2.74
NR1D2-205	ENST00000492552	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.13	■■■□□ 2.73
NR1D2-205	ENST00000492552	SLIT1	O75093	1534 aa		32.13	■■■□□ 2.73
NR1D2-205	ENST00000492552	LTK	P29376	864 aa		32.12	■■■□□ 2.73
NR1D2-205	ENST00000492552	STK26	Q9P289	416 aa		32.12	■■■□□ 2.73
NR1D2-205	ENST00000492552	ARHGAP23	Q9P227	1491 aa		32.11	■■■□□ 2.73
NR1D2-205	ENST00000492552	SLC24A1	O60721	1099 aa		32.1	■■■□□ 2.73
NR1D2-205	ENST00000492552	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.09	■■■□□ 2.73
NR1D2-205	ENST00000492552	PLEKHG1	Q9ULL1	1385 aa		32.08	■■■□□ 2.73
NR1D2-205	ENST00000492552	NRXN3	Q9Y4C0	1643 aa		32.07	■■■□□ 2.72
NR1D2-205	ENST00000492552	ANP32C	O43423	234 aa		32.06	■■■□□ 2.72
NR1D2-205	ENST00000492552	CDCA8	Q53HL2	280 aa		32.06	■■■□□ 2.72
NR1D2-205	ENST00000492552	SBNO2	Q9Y2G9	1366 aa		32.05	■■■□□ 2.72
NR1D2-205	ENST00000492552	ZNF142	P52746	1687 aa	Predicted RBP	32.02	■■■□□ 2.72
NR1D2-205	ENST00000492552	SETD1A	O15047	1707 aa	Known RBP	32.01	■■■□□ 2.71
NR1D2-205	ENST00000492552	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32	■■■□□ 2.71
NR1D2-205	ENST00000492552	MET	P08581	1390 aa		32	■■■□□ 2.71
NR1D2-205	ENST00000492552	LRPPRC	P42704	1394 aa	Known RBP	32	■■■□□ 2.71
NR1D2-205	ENST00000492552	ADAMTS13	Q76LX8	1427 aa		31.99	■■■□□ 2.71
NR1D2-205	ENST00000492552	SETD1B	Q9UPS6	1966 aa	Known RBP	31.98	■■■□□ 2.71
NR1D2-205	ENST00000492552	QRICH2	Q9H0J4	1663 aa		31.98	■■■□□ 2.71
NR1D2-205	ENST00000492552	POGK	Q9P215	609 aa		31.97	■■■□□ 2.71
NR1D2-205	ENST00000492552	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.96	■■■□□ 2.71
NR1D2-205	ENST00000492552	PRAM1	Q96QH2	718 aa		31.96	■■■□□ 2.71
NR1D2-205	ENST00000492552	ABCC11	Q96J66	1382 aa		31.94	■■■□□ 2.7
NR1D2-205	ENST00000492552	ANKLE2	Q86XL3	938 aa		31.94	■■■□□ 2.7
NR1D2-205	ENST00000492552	SLC26A8	Q96RN1	970 aa		31.94	■■■□□ 2.7
NR1D2-205	ENST00000492552	DLC1	Q96QB1	1528 aa		31.91	■■■□□ 2.7
NR1D2-205	ENST00000492552	MED14	O60244	1454 aa		31.9	■■■□□ 2.7
NR1D2-205	ENST00000492552	KDM4F	A0A1W2PPD8	638 aa		31.88	■■■□□ 2.69
NR1D2-205	ENST00000492552	EVC2	Q86UK5	1308 aa		31.88	■■■□□ 2.69
NR1D2-205	ENST00000492552	TBX22	Q9Y458	520 aa		31.88	■■■□□ 2.69
NR1D2-205	ENST00000492552	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.85	■■■□□ 2.69
NR1D2-205	ENST00000492552	WAPL	Q7Z5K2	1190 aa		31.85	■■■□□ 2.69
NR1D2-205	ENST00000492552	PANK3	Q9H999	370 aa		31.85	■■■□□ 2.69
NR1D2-205	ENST00000492552	TECPR2	O15040	1411 aa		31.84	■■■□□ 2.69
NR1D2-205	ENST00000492552	DIP2A	Q14689	1571 aa		31.84	■■■□□ 2.69
NR1D2-205	ENST00000492552	PLEKHH1	Q9ULM0	1364 aa		31.82	■■■□□ 2.68
NR1D2-205	ENST00000492552	TULP4	Q9NRJ4	1543 aa		31.81	■■■□□ 2.68
NR1D2-205	ENST00000492552	SIRT1	Q96EB6	747 aa		31.81	■■■□□ 2.68
NR1D2-205	ENST00000492552	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.81	■■■□□ 2.68
NR1D2-205	ENST00000492552	FAM135B	Q49AJ0	1406 aa		31.8	■■■□□ 2.68
NR1D2-205	ENST00000492552	KNDC1	Q76NI1	1749 aa		31.79	■■■□□ 2.68
NR1D2-205	ENST00000492552	CPS1	P31327	1500 aa		31.79	■■■□□ 2.68
NR1D2-205	ENST00000492552	CCER2	I3L3R5	266 aa		31.78	■■■□□ 2.68
NR1D2-205	ENST00000492552	CNGB1	Q14028	1251 aa	Predicted RBP	31.78	■■■□□ 2.68
NR1D2-205	ENST00000492552	PUS7	Q96PZ0	661 aa	Known RBP	31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms