RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 MYO5BQ9ULV0 1848 aa40.77■■■■■ 4.12
SH3GL3-204ENST00000492099 BCANQ96GW7 911 aa40.77■■■■■ 4.12
SH3GL3-204ENST00000492099 SLC26A8Q96RN1 970 aa40.77■■■■■ 4.12
SH3GL3-204ENST00000492099 TRIM52Q96A61 297 aa40.76■■■■■ 4.12
SH3GL3-204ENST00000492099 PLEKHG1Q9ULL1 1385 aa40.74■■■■■ 4.11
SH3GL3-204ENST00000492099 SPHKAPQ2M3C7 1700 aa40.71■■■■■ 4.11
SH3GL3-204ENST00000492099 KCNA6P17658 529 aa40.71■■■■■ 4.11
SH3GL3-204ENST00000492099 PIP4K2BP78356 416 aa40.66■■■■■ 4.1
SH3GL3-204ENST00000492099 SCAF1Q9H7N4 1312 aaKnown RBP40.66■■■■■ 4.1
SH3GL3-204ENST00000492099 SLC4A1APQ9BWU0 796 aaKnown RBP40.63■■■■■ 4.09
SH3GL3-204ENST00000492099 NUTM2DQ5VT03 806 aaPredicted RBP40.61■■■■■ 4.09
SH3GL3-204ENST00000492099 SENP3Q9H4L4 574 aaPredicted RBP40.61■■■■■ 4.09
SH3GL3-204ENST00000492099 TBX22Q9Y458 520 aa40.61■■■■■ 4.09
SH3GL3-204ENST00000492099 TRPM2O94759 1503 aa40.6■■■■■ 4.09
SH3GL3-204ENST00000492099 ZNF326Q5BKZ1 582 aaKnown RBP40.56■■■■■ 4.08
SH3GL3-204ENST00000492099 PROSER2Q86WR7 435 aaPredicted RBP40.55■■■■■ 4.08
SH3GL3-204ENST00000492099 ALKQ9UM73 1620 aa40.55■■■■■ 4.08
SH3GL3-204ENST00000492099 NWD1Q149M9 1564 aa40.53■■■■■ 4.08
SH3GL3-204ENST00000492099 NKTRP30414 1462 aaKnown RBP40.53■■■■■ 4.08
SH3GL3-204ENST00000492099 TMEM94Q12767 1356 aa40.53■■■■■ 4.08
SH3GL3-204ENST00000492099 CLTCL1P53675 1640 aa40.53■■■■■ 4.08
SH3GL3-204ENST00000492099 ADAMTS13Q76LX8 1427 aa40.5■■■■■ 4.07
SH3GL3-204ENST00000492099 ACIN1Q9UKV3 1341 aaKnown RBP40.49■■■■■ 4.07
SH3GL3-204ENST00000492099 XIRP1Q702N8 1843 aaKnown RBP40.49■■■■■ 4.07
SH3GL3-204ENST00000492099 DIP2AQ14689 1571 aa40.48■■■■■ 4.07
SH3GL3-204ENST00000492099 HSPA1LP34931 641 aa40.47■■■■■ 4.07
SH3GL3-204ENST00000492099 PIK3R4Q99570 1358 aa40.46■■■■■ 4.07
SH3GL3-204ENST00000492099 CHD2O14647 1828 aaKnown RBP40.44■■■■■ 4.06
SH3GL3-204ENST00000492099 RBM33Q96EV2 1170 aaKnown RBP40.41■■■■■ 4.06
SH3GL3-204ENST00000492099 KIF1BO60333 1816 aa40.41■■■■■ 4.06
SH3GL3-204ENST00000492099 SETD5Q9C0A6 1442 aa40.41■■■■■ 4.06
SH3GL3-204ENST00000492099 MPHOSPH9Q99550 1183 aa40.4■■■■■ 4.06
SH3GL3-204ENST00000492099 FOXD1Q16676 465 aa40.37■■■■■ 4.05
SH3GL3-204ENST00000492099 NEXMIFQ5QGS0 1516 aa40.36■■■■■ 4.05
SH3GL3-204ENST00000492099 DISP3Q9P2K9 1392 aa40.35■■■■■ 4.05
SH3GL3-204ENST00000492099 SETBP1Q9Y6X0 1596 aa40.35■■■■■ 4.05
SH3GL3-204ENST00000492099 MSH6P52701 1360 aa40.34■■■■■ 4.05
SH3GL3-204ENST00000492099 NCOA3Q9Y6Q9 1424 aa40.33■■■■■ 4.05
SH3GL3-204ENST00000492099 RPGRIP1LQ68CZ1 1315 aa40.32■■■■■ 4.04
SH3GL3-204ENST00000492099 VGFO15240 615 aaPredicted RBP40.3■■■■■ 4.04
SH3GL3-204ENST00000492099 AMOTL2Q9Y2J4 779 aa40.3■■■■■ 4.04
SH3GL3-204ENST00000492099 NRXN3Q9Y4C0 1643 aa40.29■■■■■ 4.04
SH3GL3-204ENST00000492099 FAM135BQ49AJ0 1406 aa40.27■■■■■ 4.04
SH3GL3-204ENST00000492099 CCDC144AA2RUR9 1427 aa40.26■■■■■ 4.04
SH3GL3-204ENST00000492099 PTPRUQ92729 1446 aa40.25■■■■■ 4.03
SH3GL3-204ENST00000492099 RAB3GAP2Q9H2M9 1393 aa40.23■■■■■ 4.03
SH3GL3-204ENST00000492099 C14orf37Q86TY3 774 aa40.22■■■■■ 4.03
SH3GL3-204ENST00000492099 METP08581 1390 aa40.21■■■■■ 4.03
SH3GL3-204ENST00000492099 SLAIN2Q9P270 581 aa40.18■■■■■ 4.02
SH3GL3-204ENST00000492099 C19orf44Q9H6X5 657 aa40.17■■■■■ 4.02
SH3GL3-204ENST00000492099 XRN1Q8IZH2 1706 aaKnown RBP40.13■■■■■ 4.01
SH3GL3-204ENST00000492099 CADPS2Q86UW7 1296 aa40.12■■■■■ 4.01
SH3GL3-204ENST00000492099 SPATA31E1Q6ZUB1 1445 aa40.1■■■■■ 4.01
SH3GL3-204ENST00000492099 RGL3Q3MIN7 710 aa40.1■■■■■ 4.01
SH3GL3-204ENST00000492099 PPLO60437 1756 aa40.1■■■■■ 4.01
SH3GL3-204ENST00000492099 ROBO1Q9Y6N7 1651 aa40.09■■■■■ 4.01
SH3GL3-204ENST00000492099 ATF3P18847 181 aa40.09■■■■■ 4.01
SH3GL3-204ENST00000492099 HRCP23327 699 aa40.08■■■■■ 4.01
SH3GL3-204ENST00000492099 ANKRD30BQ9BXX2 1392 aa40.04■■■■■ 4
SH3GL3-204ENST00000492099 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.04■■■■■ 4
SH3GL3-204ENST00000492099 MED1Q15648 1581 aaPredicted RBP40.02■■■■■ 4
SH3GL3-204ENST00000492099 DCCP43146 1447 aa40■■■■□ 3.99
SH3GL3-204ENST00000492099 ADGRF5Q8IZF2 1346 aa39.99■■■■□ 3.99
SH3GL3-204ENST00000492099 ILDR2Q71H61 639 aa39.98■■■■□ 3.99
SH3GL3-204ENST00000492099 SETD1AO15047 1707 aaKnown RBP39.98■■■■□ 3.99
SH3GL3-204ENST00000492099 PTCH1Q13635 1447 aa39.94■■■■□ 3.98
SH3GL3-204ENST00000492099 IFT172Q9UG01 1749 aa39.91■■■■□ 3.98
SH3GL3-204ENST00000492099 PRAG1Q86YV5 1406 aa39.91■■■■□ 3.98
SH3GL3-204ENST00000492099 ADGRL3Q9HAR2 1447 aa39.91■■■■□ 3.98
SH3GL3-204ENST00000492099 ROBO2Q9HCK4 1378 aa39.87■■■■□ 3.97
SH3GL3-204ENST00000492099 PHF23Q9BUL5 403 aaPredicted RBP39.85■■■■□ 3.97
SH3GL3-204ENST00000492099 PHLPP1O60346 1717 aa39.85■■■■□ 3.97
SH3GL3-204ENST00000492099 PIK3C2GO75747 1445 aa39.84■■■■□ 3.97
SH3GL3-204ENST00000492099 BRINP3Q76B58 766 aa39.82■■■■□ 3.97
SH3GL3-204ENST00000492099 MST1RQ04912 1400 aa39.82■■■■□ 3.96
SH3GL3-204ENST00000492099 NALCNQ8IZF0 1738 aa39.79■■■■□ 3.96
SH3GL3-204ENST00000492099 JCADQ9P266 1359 aa39.77■■■■□ 3.96
SH3GL3-204ENST00000492099 AHDC1Q5TGY3 1603 aaPredicted RBP39.76■■■■□ 3.96
SH3GL3-204ENST00000492099 MYOM2P54296 1465 aa39.76■■■■□ 3.96
SH3GL3-204ENST00000492099 LRPPRCP42704 1394 aaKnown RBP39.75■■■■□ 3.95
SH3GL3-204ENST00000492099 C14orf93Q9H972 538 aaKnown RBP39.74■■■■□ 3.95
SH3GL3-204ENST00000492099 NRXN1Q9ULB1 1477 aa39.74■■■■□ 3.95
SH3GL3-204ENST00000492099 COL16A1Q07092 1604 aaPredicted RBP39.73■■■■□ 3.95
SH3GL3-204ENST00000492099 TMEM132EQ6IEE7 984 aa39.73■■■■□ 3.95
SH3GL3-204ENST00000492099 STK26Q9P289 416 aa39.73■■■■□ 3.95
SH3GL3-204ENST00000492099 ABCC11Q96J66 1382 aa39.72■■■■□ 3.95
SH3GL3-204ENST00000492099 TECPR2O15040 1411 aa39.72■■■■□ 3.95
SH3GL3-204ENST00000492099 ASXL1Q8IXJ9 1541 aa39.71■■■■□ 3.95
SH3GL3-204ENST00000492099 SOCS7O14512 581 aa39.68■■■■□ 3.94
SH3GL3-204ENST00000492099 CFAP70Q5T0N1 1121 aa39.66■■■■□ 3.94
SH3GL3-204ENST00000492099 C1orf167Q5SNV9 1468 aa39.66■■■■□ 3.94
SH3GL3-204ENST00000492099 YTHDC2Q9H6S0 1430 aaKnown RBP39.65■■■■□ 3.94
SH3GL3-204ENST00000492099 STAC3Q96MF2 364 aa39.65■■■■□ 3.94
SH3GL3-204ENST00000492099 WAPLQ7Z5K2 1190 aa39.63■■■■□ 3.93
SH3GL3-204ENST00000492099 DHX57Q6P158 1386 aaKnown RBP39.62■■■■□ 3.93
SH3GL3-204ENST00000492099 LAMC1P11047 1609 aa39.62■■■■□ 3.93
SH3GL3-204ENST00000492099 SIRT1Q96EB6 747 aa39.61■■■■□ 3.93
SH3GL3-204ENST00000492099 SPATA31A6Q5VVP1 1343 aa39.61■■■■□ 3.93
SH3GL3-204ENST00000492099 KNDC1Q76NI1 1749 aa39.6■■■■□ 3.93
SH3GL3-204ENST00000492099 DCAF11Q8TEB1 546 aa39.6■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms