RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZHX1Q9UKY1 873 aaPredicted RBP13.93□□□□□ -0.18
CRNKL1-204ENST00000490910 DUSP27Q5VZP5 1158 aa13.92□□□□□ -0.18
CRNKL1-204ENST00000490910 GOLGA6L4A6NEF3 574 aa13.92□□□□□ -0.18
CRNKL1-204ENST00000490910 APBB1O00213 710 aa13.92□□□□□ -0.18
CRNKL1-204ENST00000490910 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.187e-7■■■■□ 20
CRNKL1-204ENST00000490910 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
CRNKL1-204ENST00000490910 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 DHX29Q7Z478 1369 aaKnown RBP13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 KIF16BQ96L93 1317 aa13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 PTPRKQ15262 1439 aa13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 EHBP1L1Q8N3D4 1523 aa13.9□□□□□ -0.18
CRNKL1-204ENST00000490910 IGHDP01880 384 aa13.9□□□□□ -0.19
CRNKL1-204ENST00000490910 TNPO1Q92973 898 aaKnown RBP13.9□□□□□ -0.19
CRNKL1-204ENST00000490910 NRDCO43847 1150 aa13.89□□□□□ -0.19
CRNKL1-204ENST00000490910 ZRSR1Q15695 479 aaKnown RBP13.89□□□□□ -0.19
CRNKL1-204ENST00000490910 LRPPRCP42704 1394 aaKnown RBP13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 K7ELQ4 463 aaPredicted RBP13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 SASS6Q6UVJ0 657 aa13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 PRPF40AO75400 957 aaKnown RBP13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
CRNKL1-204ENST00000490910 DYNC1I1O14576 645 aa13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 OFD1O75665 1012 aa13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
CRNKL1-204ENST00000490910 MBD3O95983 291 aa13.86□□□□□ -0.19
CRNKL1-204ENST00000490910 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
CRNKL1-204ENST00000490910 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
CRNKL1-204ENST00000490910 SEC24BO95487 1268 aa13.86□□□□□ -0.19
CRNKL1-204ENST00000490910 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
CRNKL1-204ENST00000490910 PEG3Q9GZU2 1588 aa13.84□□□□□ -0.19
CRNKL1-204ENST00000490910 CBX1P83916 185 aa13.84□□□□□ -0.19
CRNKL1-204ENST00000490910 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
CRNKL1-204ENST00000490910 CCDC66A2RUB6 948 aa13.83□□□□□ -0.19
CRNKL1-204ENST00000490910 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
CRNKL1-204ENST00000490910 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
CRNKL1-204ENST00000490910 KIF3AQ9Y496 699 aa13.83□□□□□ -0.2
CRNKL1-204ENST00000490910 CDC45O75419 566 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 REC8O95072 547 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 MVPQ14764 893 aaKnown RBP13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 RABEP1Q15276 862 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 TCP11L2Q8N4U5 519 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 MCM5P33992 734 aa13.82□□□□□ -0.2
CRNKL1-204ENST00000490910 ROCK1Q13464 1354 aa13.81□□□□□ -0.2
CRNKL1-204ENST00000490910 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
CRNKL1-204ENST00000490910 SMAP1Q8IYB5 467 aaPredicted RBP13.81□□□□□ -0.2
CRNKL1-204ENST00000490910 MPNDQ8N594 471 aa13.81□□□□□ -0.2
CRNKL1-204ENST00000490910 DAPK1P53355 1430 aa13.8□□□□□ -0.2
CRNKL1-204ENST00000490910 SSFA2P28290 1259 aa13.8□□□□□ -0.2
CRNKL1-204ENST00000490910 KLHL40Q2TBA0 621 aa13.8□□□□□ -0.2
CRNKL1-204ENST00000490910 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
CRNKL1-204ENST00000490910 PDE4CQ08493 712 aa13.8□□□□□ -0.2
CRNKL1-204ENST00000490910 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
CRNKL1-204ENST00000490910 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
CRNKL1-204ENST00000490910 ZNF592Q92610 1267 aa13.79□□□□□ -0.2
CRNKL1-204ENST00000490910 CWC22Q9HCG8 908 aaKnown RBP13.79□□□□□ -0.2
CRNKL1-204ENST00000490910 PARD3Q8TEW0 1356 aa13.79□□□□□ -0.2
CRNKL1-204ENST00000490910 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 HTATSF1O43719 755 aaKnown RBP13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 FSD2A1L4K1 749 aa13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
CRNKL1-204ENST00000490910 RAD54L2Q9Y4B4 1467 aa13.77□□□□□ -0.2
CRNKL1-204ENST00000490910 SYCE3A1L190 88 aa13.77□□□□□ -0.2
CRNKL1-204ENST00000490910 ERBINQ96RT1 1412 aa13.77□□□□□ -0.2
CRNKL1-204ENST00000490910 KCNJ4P48050 445 aa13.77□□□□□ -0.21
CRNKL1-204ENST00000490910 TERF1P54274 439 aa13.77□□□□□ -0.21
CRNKL1-204ENST00000490910 TPM3P06753 285 aa13.77□□□□□ -0.21
CRNKL1-204ENST00000490910 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
CRNKL1-204ENST00000490910 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
CRNKL1-204ENST00000490910 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
CRNKL1-204ENST00000490910 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
CRNKL1-204ENST00000490910 TRIM6-TRIM34B2RNG4 842 aa13.76□□□□□ -0.21
CRNKL1-204ENST00000490910 BAG4O95429 457 aaKnown RBP13.76□□□□□ -0.21
CRNKL1-204ENST00000490910 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
CRNKL1-204ENST00000490910 HMMRO75330 724 aa13.75□□□□□ -0.21
CRNKL1-204ENST00000490910 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
CRNKL1-204ENST00000490910 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
CRNKL1-204ENST00000490910 CCDC94Q9BW85 323 aaPredicted RBP13.75□□□□□ -0.21
CRNKL1-204ENST00000490910 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
CRNKL1-204ENST00000490910 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
CRNKL1-204ENST00000490910 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
CRNKL1-204ENST00000490910 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
CRNKL1-204ENST00000490910 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
CRNKL1-204ENST00000490910 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
CRNKL1-204ENST00000490910 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
CRNKL1-204ENST00000490910 GCC1Q96CN9 775 aa13.73□□□□□ -0.21
CRNKL1-204ENST00000490910 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
CRNKL1-204ENST00000490910 CFAP43Q8NDM7 1665 aa13.73□□□□□ -0.21
CRNKL1-204ENST00000490910 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 SRPK2P78362 688 aaKnown RBP13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 ZSCAN23Q3MJ62 389 aa13.72□□□□□ -0.21
CRNKL1-204ENST00000490910 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms