RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
SCAMP4-208ENST00000489554 PLEKHG1Q9ULL1 1385 aa15.78■□□□□ 0.12
SCAMP4-208ENST00000489554 STRCP1A6NGW2 1772 aa15.78■□□□□ 0.12
SCAMP4-208ENST00000489554 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
SCAMP4-208ENST00000489554 BCANQ96GW7 911 aa15.77■□□□□ 0.12
SCAMP4-208ENST00000489554 SLC26A8Q96RN1 970 aa15.77■□□□□ 0.12
SCAMP4-208ENST00000489554 KCNA6P17658 529 aa15.76■□□□□ 0.11
SCAMP4-208ENST00000489554 SPHKAPQ2M3C7 1700 aa15.76■□□□□ 0.11
SCAMP4-208ENST00000489554 MYO5BQ9ULV0 1848 aa15.75■□□□□ 0.11
SCAMP4-208ENST00000489554 TRPM2O94759 1503 aa15.73■□□□□ 0.11
SCAMP4-208ENST00000489554 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-208ENST00000489554 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
SCAMP4-208ENST00000489554 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
SCAMP4-208ENST00000489554 TBX22Q9Y458 520 aa15.72■□□□□ 0.11
SCAMP4-208ENST00000489554 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-208ENST00000489554 NWD1Q149M9 1564 aa15.71■□□□□ 0.11
SCAMP4-208ENST00000489554 ACIN1Q9UKV3 1341 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-208ENST00000489554 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
SCAMP4-208ENST00000489554 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
SCAMP4-208ENST00000489554 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
SCAMP4-208ENST00000489554 ALKQ9UM73 1620 aa15.69■□□□□ 0.1
SCAMP4-208ENST00000489554 ZNF326Q5BKZ1 582 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-208ENST00000489554 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-208ENST00000489554 PROSER2Q86WR7 435 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-208ENST00000489554 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
SCAMP4-208ENST00000489554 CLTCL1P53675 1640 aa15.68■□□□□ 0.1
SCAMP4-208ENST00000489554 PIK3R4Q99570 1358 aa15.68■□□□□ 0.1
SCAMP4-208ENST00000489554 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-208ENST00000489554 RAB3GAP2Q9H2M9 1393 aa15.67■□□□□ 0.1
SCAMP4-208ENST00000489554 HSPA1LP34931 641 aa15.66■□□□□ 0.1
SCAMP4-208ENST00000489554 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-208ENST00000489554 CHD2O14647 1828 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-208ENST00000489554 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
SCAMP4-208ENST00000489554 NCOA3Q9Y6Q9 1424 aa15.63■□□□□ 0.09
SCAMP4-208ENST00000489554 MPHOSPH9Q99550 1183 aa15.63■□□□□ 0.09
SCAMP4-208ENST00000489554 KIF1BO60333 1816 aa15.63■□□□□ 0.09
SCAMP4-208ENST00000489554 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
SCAMP4-208ENST00000489554 MSH6P52701 1360 aa15.62■□□□□ 0.09
SCAMP4-208ENST00000489554 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
SCAMP4-208ENST00000489554 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
SCAMP4-208ENST00000489554 RBM33Q96EV2 1170 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-208ENST00000489554 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 HRCP23327 699 aa15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 FOXD1Q16676 465 aa15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 NRXN3Q9Y4C0 1643 aa15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
SCAMP4-208ENST00000489554 AMOTL2Q9Y2J4 779 aa15.59■□□□□ 0.09
SCAMP4-208ENST00000489554 PTPRUQ92729 1446 aa15.58■□□□□ 0.08
SCAMP4-208ENST00000489554 C14orf37Q86TY3 774 aa15.57■□□□□ 0.08
SCAMP4-208ENST00000489554 METP08581 1390 aa15.56■□□□□ 0.08
SCAMP4-208ENST00000489554 C19orf44Q9H6X5 657 aa15.55■□□□□ 0.08
SCAMP4-208ENST00000489554 SLAIN2Q9P270 581 aa15.55■□□□□ 0.08
SCAMP4-208ENST00000489554 XRN1Q8IZH2 1706 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-208ENST00000489554 SPATA31E1Q6ZUB1 1445 aa15.53■□□□□ 0.08
SCAMP4-208ENST00000489554 CADPS2Q86UW7 1296 aa15.53■□□□□ 0.08
SCAMP4-208ENST00000489554 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-208ENST00000489554 ATF3P18847 181 aa15.52■□□□□ 0.08
SCAMP4-208ENST00000489554 PPLO60437 1756 aa15.52■□□□□ 0.07
SCAMP4-208ENST00000489554 DCCP43146 1447 aa15.51■□□□□ 0.07
SCAMP4-208ENST00000489554 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
SCAMP4-208ENST00000489554 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
SCAMP4-208ENST00000489554 MED1Q15648 1581 aaPredicted RBP15.5■□□□□ 0.07
SCAMP4-208ENST00000489554 RGL3Q3MIN7 710 aa15.5■□□□□ 0.07
SCAMP4-208ENST00000489554 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-208ENST00000489554 PTCH1Q13635 1447 aa15.48■□□□□ 0.07
SCAMP4-208ENST00000489554 PRAG1Q86YV5 1406 aa15.48■□□□□ 0.07
SCAMP4-208ENST00000489554 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
SCAMP4-208ENST00000489554 SETD1AO15047 1707 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-208ENST00000489554 ADGRL3Q9HAR2 1447 aa15.47■□□□□ 0.07
SCAMP4-208ENST00000489554 ILDR2Q71H61 639 aa15.45■□□□□ 0.06
SCAMP4-208ENST00000489554 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
SCAMP4-208ENST00000489554 ROBO2Q9HCK4 1378 aa15.44■□□□□ 0.06
SCAMP4-208ENST00000489554 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
SCAMP4-208ENST00000489554 PHF23Q9BUL5 403 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-208ENST00000489554 MST1RQ04912 1400 aa15.43■□□□□ 0.06
SCAMP4-208ENST00000489554 PHLPP1O60346 1717 aa15.42■□□□□ 0.06
SCAMP4-208ENST00000489554 MYOM2P54296 1465 aa15.41■□□□□ 0.06
SCAMP4-208ENST00000489554 JCADQ9P266 1359 aa15.41■□□□□ 0.06
SCAMP4-208ENST00000489554 BRINP3Q76B58 766 aa15.41■□□□□ 0.06
SCAMP4-208ENST00000489554 AHDC1Q5TGY3 1603 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-208ENST00000489554 NALCNQ8IZF0 1738 aa15.4■□□□□ 0.06
SCAMP4-208ENST00000489554 LRPPRCP42704 1394 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-208ENST00000489554 TECPR2O15040 1411 aa15.4■□□□□ 0.06
SCAMP4-208ENST00000489554 NRXN1Q9ULB1 1477 aa15.4■□□□□ 0.06
SCAMP4-208ENST00000489554 COL16A1Q07092 1604 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-208ENST00000489554 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
SCAMP4-208ENST00000489554 ABCC11Q96J66 1382 aa15.38■□□□□ 0.05
SCAMP4-208ENST00000489554 C14orf93Q9H972 538 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-208ENST00000489554 SOCS7O14512 581 aa15.36■□□□□ 0.05
SCAMP4-208ENST00000489554 TMEM132EQ6IEE7 984 aa15.36■□□□□ 0.05
SCAMP4-208ENST00000489554 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
SCAMP4-208ENST00000489554 STK26Q9P289 416 aa15.36■□□□□ 0.05
SCAMP4-208ENST00000489554 LAMC1P11047 1609 aa15.35■□□□□ 0.05
SCAMP4-208ENST00000489554 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
SCAMP4-208ENST00000489554 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
SCAMP4-208ENST00000489554 SPATA31A6Q5VVP1 1343 aa15.35■□□□□ 0.05
SCAMP4-208ENST00000489554 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
SCAMP4-208ENST00000489554 SIRT1Q96EB6 747 aa15.34■□□□□ 0.05
SCAMP4-208ENST00000489554 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms