RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 ADGRB3O60242 1522 aa11.9□□□□□ -0.5
ABCD4-213ENST00000489207 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
ABCD4-213ENST00000489207 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
ABCD4-213ENST00000489207 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
ABCD4-213ENST00000489207 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
ABCD4-213ENST00000489207 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
ABCD4-213ENST00000489207 TNRQ92752 1358 aa11.87□□□□□ -0.51
ABCD4-213ENST00000489207 CLTCQ00610 1675 aaKnown RBP11.87□□□□□ -0.51
ABCD4-213ENST00000489207 KIF1BO60333 1816 aa11.86□□□□□ -0.51
ABCD4-213ENST00000489207 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
ABCD4-213ENST00000489207 ZNF326Q5BKZ1 582 aaKnown RBP11.86□□□□□ -0.51
ABCD4-213ENST00000489207 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
ABCD4-213ENST00000489207 KDM5AP29375 1690 aaKnown RBP11.85□□□□□ -0.51
ABCD4-213ENST00000489207 UGGT1Q9NYU2 1555 aa11.85□□□□□ -0.51
ABCD4-213ENST00000489207 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
ABCD4-213ENST00000489207 TMEM131LA2VDJ0 1609 aa11.85□□□□□ -0.51
ABCD4-213ENST00000489207 ADGRF5Q8IZF2 1346 aa11.85□□□□□ -0.51
ABCD4-213ENST00000489207 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
ABCD4-213ENST00000489207 NBPF1Q3BBV0 1214 aa11.84□□□□□ -0.51
ABCD4-213ENST00000489207 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
ABCD4-213ENST00000489207 LAMC1P11047 1609 aa11.83□□□□□ -0.52
ABCD4-213ENST00000489207 THEMISQ8N1K5 641 aaPredicted RBP11.83□□□□□ -0.52
ABCD4-213ENST00000489207 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
ABCD4-213ENST00000489207 PIK3C2GO75747 1445 aa11.83□□□□□ -0.52
ABCD4-213ENST00000489207 KIAA1210Q9ULL0 1709 aa11.83□□□□□ -0.52
ABCD4-213ENST00000489207 CFAP70Q5T0N1 1121 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 C3P01024 1663 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 NEXMIFQ5QGS0 1516 aa11.81□□□□□ -0.52
ABCD4-213ENST00000489207 USP47Q96K76 1375 aa11.8□□□□□ -0.52
ABCD4-213ENST00000489207 TMEM2Q9UHN6 1383 aa11.8□□□□□ -0.52
ABCD4-213ENST00000489207 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
ABCD4-213ENST00000489207 PUS7Q96PZ0 661 aaKnown RBP11.8□□□□□ -0.52
ABCD4-213ENST00000489207 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
ABCD4-213ENST00000489207 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
ABCD4-213ENST00000489207 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
ABCD4-213ENST00000489207 ST20-MTHFSA0A0A6YYL1 179 aa11.79□□□□□ -0.52
ABCD4-213ENST00000489207 TESK2Q96S53 571 aa11.79□□□□□ -0.52
ABCD4-213ENST00000489207 SCAF11Q99590 1463 aaKnown RBP11.78□□□□□ -0.52
ABCD4-213ENST00000489207 SETD1BQ9UPS6 1966 aaKnown RBP11.78□□□□□ -0.52
ABCD4-213ENST00000489207 PPLO60437 1756 aa11.78□□□□□ -0.52
ABCD4-213ENST00000489207 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.52
ABCD4-213ENST00000489207 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
ABCD4-213ENST00000489207 ZNF335Q9H4Z2 1342 aaPredicted RBP11.77□□□□□ -0.53
ABCD4-213ENST00000489207 SBNO2Q9Y2G9 1366 aa11.77□□□□□ -0.53
ABCD4-213ENST00000489207 SLIT1O75093 1534 aa11.76□□□□□ -0.53
ABCD4-213ENST00000489207 EID1Q9Y6B2 187 aa11.76□□□□□ -0.53
ABCD4-213ENST00000489207 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
ABCD4-213ENST00000489207 CDCA8Q53HL2 280 aa11.75□□□□□ -0.53
ABCD4-213ENST00000489207 TBX22Q9Y458 520 aa11.75□□□□□ -0.53
ABCD4-213ENST00000489207 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
ABCD4-213ENST00000489207 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
ABCD4-213ENST00000489207 EIF3AQ14152 1382 aaKnown RBP11.75□□□□□ -0.53
ABCD4-213ENST00000489207 TXNDC2Q86VQ3 553 aa11.74□□□□□ -0.53
ABCD4-213ENST00000489207 PLEKHG1Q9ULL1 1385 aa11.74□□□□□ -0.53
ABCD4-213ENST00000489207 ADGRB1O14514 1584 aa11.74□□□□□ -0.53
ABCD4-213ENST00000489207 LTKP29376 864 aa11.73□□□□□ -0.53
ABCD4-213ENST00000489207 TMF1P82094 1093 aa11.73□□□□□ -0.53
ABCD4-213ENST00000489207 IQSEC2Q5JU85 1478 aa11.73□□□□□ -0.53
ABCD4-213ENST00000489207 ABCC11Q96J66 1382 aa11.73□□□□□ -0.53
ABCD4-213ENST00000489207 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
ABCD4-213ENST00000489207 HIRIP3Q9BW71 556 aaPredicted RBP11.73□□□□□ -0.53
ABCD4-213ENST00000489207 MED14O60244 1454 aa11.72□□□□□ -0.53
ABCD4-213ENST00000489207 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
ABCD4-213ENST00000489207 UBAP1LF5GYI3 381 aa11.72□□□□□ -0.53
ABCD4-213ENST00000489207 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
ABCD4-213ENST00000489207 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
ABCD4-213ENST00000489207 LRPPRCP42704 1394 aaKnown RBP11.7□□□□□ -0.54
ABCD4-213ENST00000489207 DDX10Q13206 875 aaKnown RBP11.7□□□□□ -0.54
ABCD4-213ENST00000489207 ALKQ9UM73 1620 aa11.7□□□□□ -0.54
ABCD4-213ENST00000489207 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
ABCD4-213ENST00000489207 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
ABCD4-213ENST00000489207 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
ABCD4-213ENST00000489207 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-213ENST00000489207 MED1Q15648 1581 aaPredicted RBP11.68□□□□□ -0.54
ABCD4-213ENST00000489207 HSPA1LP34931 641 aa11.68□□□□□ -0.54
ABCD4-213ENST00000489207 IQGAP1P46940 1657 aa11.68□□□□□ -0.54
ABCD4-213ENST00000489207 TECPR2O15040 1411 aa11.68□□□□□ -0.54
ABCD4-213ENST00000489207 ADAMTS13Q76LX8 1427 aa11.68□□□□□ -0.54
ABCD4-213ENST00000489207 YTHDC2Q9H6S0 1430 aaKnown RBP11.68□□□□□ -0.54
ABCD4-213ENST00000489207 DLC1Q96QB1 1528 aa11.67□□□□□ -0.54
ABCD4-213ENST00000489207 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
ABCD4-213ENST00000489207 FAM135BQ49AJ0 1406 aa11.67□□□□□ -0.54
ABCD4-213ENST00000489207 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
ABCD4-213ENST00000489207 MYO5BQ9ULV0 1848 aa11.66□□□□□ -0.54
ABCD4-213ENST00000489207 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
ABCD4-213ENST00000489207 METP08581 1390 aa11.65□□□□□ -0.55
ABCD4-213ENST00000489207 MYO3AQ8NEV4 1616 aa11.64□□□□□ -0.55
ABCD4-213ENST00000489207 ZNF142P52746 1687 aaPredicted RBP11.64□□□□□ -0.55
ABCD4-213ENST00000489207 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
ABCD4-213ENST00000489207 PIP4K2BP78356 416 aa11.63□□□□□ -0.55
ABCD4-213ENST00000489207 ASXL1Q8IXJ9 1541 aa11.62□□□□□ -0.55
ABCD4-213ENST00000489207 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
ABCD4-213ENST00000489207 MIER1Q8N108 512 aa11.62□□□□□ -0.55
ABCD4-213ENST00000489207 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
ABCD4-213ENST00000489207 POLR1AO95602 1720 aaPredicted RBP11.61□□□□□ -0.55
ABCD4-213ENST00000489207 CCER2I3L3R5 266 aa11.61□□□□□ -0.55
ABCD4-213ENST00000489207 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms