RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
TOP3A-206ENST00000489131 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
TOP3A-206ENST00000489131 KDM2AQ9Y2K7 1162 aa18.2■□□□□ 0.5
TOP3A-206ENST00000489131 SETBP1Q9Y6X0 1596 aa18.2■□□□□ 0.5
TOP3A-206ENST00000489131 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
TOP3A-206ENST00000489131 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
TOP3A-206ENST00000489131 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
TOP3A-206ENST00000489131 MYO3AQ8NEV4 1616 aa18.16■□□□□ 0.5
TOP3A-206ENST00000489131 VGFO15240 615 aaPredicted RBP18.16■□□□□ 0.5
TOP3A-206ENST00000489131 ADGRF5Q8IZF2 1346 aa18.16■□□□□ 0.5
TOP3A-206ENST00000489131 USP47Q96K76 1375 aa18.16■□□□□ 0.5
TOP3A-206ENST00000489131 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
TOP3A-206ENST00000489131 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
TOP3A-206ENST00000489131 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
TOP3A-206ENST00000489131 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
TOP3A-206ENST00000489131 POLR1AO95602 1720 aaPredicted RBP18.13■□□□□ 0.49
TOP3A-206ENST00000489131 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
TOP3A-206ENST00000489131 SLIT1O75093 1534 aa18.13■□□□□ 0.49
TOP3A-206ENST00000489131 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
TOP3A-206ENST00000489131 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
TOP3A-206ENST00000489131 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
TOP3A-206ENST00000489131 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
TOP3A-206ENST00000489131 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
TOP3A-206ENST00000489131 NBPF1Q3BBV0 1214 aa18.11■□□□□ 0.49
TOP3A-206ENST00000489131 RIMS2Q9UQ26 1411 aa18.11■□□□□ 0.49
TOP3A-206ENST00000489131 CEP170BQ9Y4F5 1589 aaPredicted RBP18.1■□□□□ 0.49
TOP3A-206ENST00000489131 PTPRMP28827 1452 aa18.1■□□□□ 0.49
TOP3A-206ENST00000489131 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
TOP3A-206ENST00000489131 TMEM2Q9UHN6 1383 aa18.1■□□□□ 0.49
TOP3A-206ENST00000489131 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
TOP3A-206ENST00000489131 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.48
TOP3A-206ENST00000489131 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
TOP3A-206ENST00000489131 SETD1AO15047 1707 aaKnown RBP18.07■□□□□ 0.48
TOP3A-206ENST00000489131 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
TOP3A-206ENST00000489131 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
TOP3A-206ENST00000489131 CFAP70Q5T0N1 1121 aa18.05■□□□□ 0.48
TOP3A-206ENST00000489131 ALKQ9UM73 1620 aa18.05■□□□□ 0.48
TOP3A-206ENST00000489131 ASXL1Q8IXJ9 1541 aa18.04■□□□□ 0.48
TOP3A-206ENST00000489131 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
TOP3A-206ENST00000489131 SBNO2Q9Y2G9 1366 aa18.02■□□□□ 0.47
TOP3A-206ENST00000489131 THEMISQ8N1K5 641 aaPredicted RBP18.01■□□□□ 0.47
TOP3A-206ENST00000489131 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
TOP3A-206ENST00000489131 ST20-MTHFSA0A0A6YYL1 179 aa18■□□□□ 0.47
TOP3A-206ENST00000489131 KDM4FA0A1W2PPD8 638 aa18■□□□□ 0.47
TOP3A-206ENST00000489131 HIRIP3Q9BW71 556 aaPredicted RBP18■□□□□ 0.47
TOP3A-206ENST00000489131 CCDC7Q96M83 1385 aa18■□□□□ 0.47
TOP3A-206ENST00000489131 WASHC2AQ641Q2 1341 aa17.99■□□□□ 0.47
TOP3A-206ENST00000489131 TESK2Q96S53 571 aa17.99■□□□□ 0.47
TOP3A-206ENST00000489131 MED14O60244 1454 aa17.99■□□□□ 0.47
TOP3A-206ENST00000489131 DIEXFQ68CQ4 756 aaKnown RBP17.98■□□□□ 0.47
TOP3A-206ENST00000489131 ARHGEF28Q8N1W1 1705 aaKnown RBP17.98■□□□□ 0.47
TOP3A-206ENST00000489131 DLC1Q96QB1 1528 aa17.98■□□□□ 0.47
TOP3A-206ENST00000489131 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
TOP3A-206ENST00000489131 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
TOP3A-206ENST00000489131 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
TOP3A-206ENST00000489131 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
TOP3A-206ENST00000489131 KIF7Q2M1P5 1343 aa17.96■□□□□ 0.46
TOP3A-206ENST00000489131 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
TOP3A-206ENST00000489131 NUTM2DQ5VT03 806 aaPredicted RBP17.95■□□□□ 0.46
TOP3A-206ENST00000489131 LTKP29376 864 aa17.94■□□□□ 0.46
TOP3A-206ENST00000489131 TECPR2O15040 1411 aa17.94■□□□□ 0.46
TOP3A-206ENST00000489131 YTHDC2Q9H6S0 1430 aaKnown RBP17.94■□□□□ 0.46
TOP3A-206ENST00000489131 EID1Q9Y6B2 187 aa17.93■□□□□ 0.46
TOP3A-206ENST00000489131 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
TOP3A-206ENST00000489131 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
TOP3A-206ENST00000489131 QRICH2Q9H0J4 1663 aa17.91■□□□□ 0.46
TOP3A-206ENST00000489131 TXNDC2Q86VQ3 553 aa17.91■□□□□ 0.46
TOP3A-206ENST00000489131 CPS1P31327 1500 aa17.9■□□□□ 0.46
TOP3A-206ENST00000489131 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
TOP3A-206ENST00000489131 SIRT1Q96EB6 747 aa17.89■□□□□ 0.45
TOP3A-206ENST00000489131 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
TOP3A-206ENST00000489131 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
TOP3A-206ENST00000489131 TMF1P82094 1093 aa17.88■□□□□ 0.45
TOP3A-206ENST00000489131 METP08581 1390 aa17.88■□□□□ 0.45
TOP3A-206ENST00000489131 FAM135BQ49AJ0 1406 aa17.88■□□□□ 0.45
TOP3A-206ENST00000489131 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
TOP3A-206ENST00000489131 TBX22Q9Y458 520 aa17.87■□□□□ 0.45
TOP3A-206ENST00000489131 PIK3R4Q99570 1358 aa17.87■□□□□ 0.45
TOP3A-206ENST00000489131 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
TOP3A-206ENST00000489131 PUS7Q96PZ0 661 aaKnown RBP17.86■□□□□ 0.45
TOP3A-206ENST00000489131 CDCA8Q53HL2 280 aa17.85■□□□□ 0.45
TOP3A-206ENST00000489131 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
TOP3A-206ENST00000489131 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
TOP3A-206ENST00000489131 XRN1Q8IZH2 1706 aaKnown RBP17.84■□□□□ 0.45
TOP3A-206ENST00000489131 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
TOP3A-206ENST00000489131 PTCH1Q13635 1447 aa17.81■□□□□ 0.44
TOP3A-206ENST00000489131 MYOM1P52179 1685 aa17.81■□□□□ 0.44
TOP3A-206ENST00000489131 LMTK3Q96Q04 1460 aa17.8■□□□□ 0.44
TOP3A-206ENST00000489131 NPHP4O75161 1426 aaPredicted RBP17.8■□□□□ 0.44
TOP3A-206ENST00000489131 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
TOP3A-206ENST00000489131 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
TOP3A-206ENST00000489131 PRAM1Q96QH2 718 aa17.77■□□□□ 0.44
TOP3A-206ENST00000489131 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
TOP3A-206ENST00000489131 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
TOP3A-206ENST00000489131 STK26Q9P289 416 aa17.75■□□□□ 0.43
TOP3A-206ENST00000489131 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
TOP3A-206ENST00000489131 EVC2Q86UK5 1308 aa17.74■□□□□ 0.43
TOP3A-206ENST00000489131 SLC26A8Q96RN1 970 aa17.74■□□□□ 0.43
TOP3A-206ENST00000489131 NINLQ9Y2I6 1382 aa17.74■□□□□ 0.43
TOP3A-206ENST00000489131 BCANQ96GW7 911 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms