RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 MYOM2P54296 1465 aa16.38■□□□□ 0.21
CMSS1-205ENST00000489081 MAPK8IP2Q13387 824 aaPredicted RBP16.38■□□□□ 0.21
CMSS1-205ENST00000489081 A2ML1A8K2U0 1454 aa16.37■□□□□ 0.21
CMSS1-205ENST00000489081 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
CMSS1-205ENST00000489081 STAG3Q9UJ98 1225 aa16.37■□□□□ 0.21
CMSS1-205ENST00000489081 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
CMSS1-205ENST00000489081 ADGRF5Q8IZF2 1346 aa16.35■□□□□ 0.21
CMSS1-205ENST00000489081 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
CMSS1-205ENST00000489081 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
CMSS1-205ENST00000489081 IFT172Q9UG01 1749 aa16.34■□□□□ 0.21
CMSS1-205ENST00000489081 PTPRMP28827 1452 aa16.34■□□□□ 0.21
CMSS1-205ENST00000489081 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
CMSS1-205ENST00000489081 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
CMSS1-205ENST00000489081 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
CMSS1-205ENST00000489081 PPLO60437 1756 aa16.31■□□□□ 0.2
CMSS1-205ENST00000489081 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
CMSS1-205ENST00000489081 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
CMSS1-205ENST00000489081 ROCK2O75116 1388 aaKnown RBP16.3■□□□□ 0.2
CMSS1-205ENST00000489081 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
CMSS1-205ENST00000489081 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
CMSS1-205ENST00000489081 PIK3C2GO75747 1445 aa16.29■□□□□ 0.2
CMSS1-205ENST00000489081 RIMS2Q9UQ26 1411 aa16.29■□□□□ 0.2
CMSS1-205ENST00000489081 NBPF1Q3BBV0 1214 aa16.29■□□□□ 0.2
CMSS1-205ENST00000489081 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
CMSS1-205ENST00000489081 UBR1Q8IWV7 1749 aa16.28■□□□□ 0.2
CMSS1-205ENST00000489081 TMEM2Q9UHN6 1383 aa16.28■□□□□ 0.2
CMSS1-205ENST00000489081 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
CMSS1-205ENST00000489081 KDM4FA0A1W2PPD8 638 aa16.28■□□□□ 0.2
CMSS1-205ENST00000489081 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.26e-6■■■■□ 25.1
CMSS1-205ENST00000489081 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
CMSS1-205ENST00000489081 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
CMSS1-205ENST00000489081 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
CMSS1-205ENST00000489081 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
CMSS1-205ENST00000489081 C14orf93Q9H972 538 aaKnown RBP16.26■□□□□ 0.19
CMSS1-205ENST00000489081 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
CMSS1-205ENST00000489081 HDGFP51858 240 aaKnown RBP16.25■□□□□ 0.19
CMSS1-205ENST00000489081 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
CMSS1-205ENST00000489081 DMRT2Q9Y5R5 561 aa16.25■□□□□ 0.19
CMSS1-205ENST00000489081 CEP170BQ9Y4F5 1589 aaPredicted RBP16.25■□□□□ 0.19
CMSS1-205ENST00000489081 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
CMSS1-205ENST00000489081 USP47Q96K76 1375 aa16.25■□□□□ 0.19
CMSS1-205ENST00000489081 LAMC1P11047 1609 aa16.23■□□□□ 0.19
CMSS1-205ENST00000489081 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
CMSS1-205ENST00000489081 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
CMSS1-205ENST00000489081 SLIT1O75093 1534 aa16.23■□□□□ 0.19
CMSS1-205ENST00000489081 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
CMSS1-205ENST00000489081 SETD1BQ9UPS6 1966 aaKnown RBP16.21■□□□□ 0.19
CMSS1-205ENST00000489081 LTKP29376 864 aa16.2■□□□□ 0.18
CMSS1-205ENST00000489081 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
CMSS1-205ENST00000489081 SETBP1Q9Y6X0 1596 aa16.2■□□□□ 0.18
CMSS1-205ENST00000489081 ADGRB1O14514 1584 aa16.19■□□□□ 0.18
CMSS1-205ENST00000489081 SCAF11Q99590 1463 aaKnown RBP16.19■□□□□ 0.18
CMSS1-205ENST00000489081 TXNDC2Q86VQ3 553 aa16.19■□□□□ 0.18
CMSS1-205ENST00000489081 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
CMSS1-205ENST00000489081 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
CMSS1-205ENST00000489081 ALKQ9UM73 1620 aa16.17■□□□□ 0.18
CMSS1-205ENST00000489081 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
CMSS1-205ENST00000489081 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
CMSS1-205ENST00000489081 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
CMSS1-205ENST00000489081 IQGAP1P46940 1657 aa16.14■□□□□ 0.18
CMSS1-205ENST00000489081 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
CMSS1-205ENST00000489081 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
CMSS1-205ENST00000489081 ANKLE2Q86XL3 938 aa16.13■□□□□ 0.17
CMSS1-205ENST00000489081 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
CMSS1-205ENST00000489081 MED14O60244 1454 aa16.11■□□□□ 0.17
CMSS1-205ENST00000489081 C11orf95C9JLR9 678 aaPredicted RBP16.11■□□□□ 0.17
CMSS1-205ENST00000489081 BCANQ96GW7 911 aa16.11■□□□□ 0.17
CMSS1-205ENST00000489081 TESK2Q96S53 571 aa16.11■□□□□ 0.17
CMSS1-205ENST00000489081 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
CMSS1-205ENST00000489081 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
CMSS1-205ENST00000489081 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
CMSS1-205ENST00000489081 METP08581 1390 aa16.1■□□□□ 0.17
CMSS1-205ENST00000489081 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
CMSS1-205ENST00000489081 LRPPRCP42704 1394 aaKnown RBP16.09■□□□□ 0.17
CMSS1-205ENST00000489081 STK26Q9P289 416 aa16.08■□□□□ 0.16
CMSS1-205ENST00000489081 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
CMSS1-205ENST00000489081 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
CMSS1-205ENST00000489081 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
CMSS1-205ENST00000489081 DIP2AQ14689 1571 aa16.06■□□□□ 0.16
CMSS1-205ENST00000489081 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
CMSS1-205ENST00000489081 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
CMSS1-205ENST00000489081 CENPJQ9HC77 1338 aaPredicted RBP16.06■□□□□ 0.16
CMSS1-205ENST00000489081 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
CMSS1-205ENST00000489081 DLC1Q96QB1 1528 aa16.04■□□□□ 0.16
CMSS1-205ENST00000489081 NPHP4O75161 1426 aaPredicted RBP16.04■□□□□ 0.16
CMSS1-205ENST00000489081 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
CMSS1-205ENST00000489081 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
CMSS1-205ENST00000489081 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
CMSS1-205ENST00000489081 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
CMSS1-205ENST00000489081 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
CMSS1-205ENST00000489081 TMF1P82094 1093 aa16.03■□□□□ 0.16
CMSS1-205ENST00000489081 TECPR2O15040 1411 aa16.02■□□□□ 0.16
CMSS1-205ENST00000489081 ARHGEF28Q8N1W1 1705 aaKnown RBP16.02■□□□□ 0.16
CMSS1-205ENST00000489081 HSPA2P54652 639 aa16.02■□□□□ 0.16
CMSS1-205ENST00000489081 DDX10Q13206 875 aaKnown RBP16.02■□□□□ 0.16
CMSS1-205ENST00000489081 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
CMSS1-205ENST00000489081 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
CMSS1-205ENST00000489081 PTPRUQ92729 1446 aa16.02■□□□□ 0.15
CMSS1-205ENST00000489081 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
CMSS1-205ENST00000489081 FAM135BQ49AJ0 1406 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms