RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-216ENST00000488085 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
PSMD2-216ENST00000488085 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
PSMD2-216ENST00000488085 ALKQ9UM73 1620 aa13.24□□□□□ -0.29
PSMD2-216ENST00000488085 PLEKHG1Q9ULL1 1385 aa13.24□□□□□ -0.29
PSMD2-216ENST00000488085 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
PSMD2-216ENST00000488085 DIP2AQ14689 1571 aa13.23□□□□□ -0.29
PSMD2-216ENST00000488085 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
PSMD2-216ENST00000488085 NEXMIFQ5QGS0 1516 aa13.22□□□□□ -0.29
PSMD2-216ENST00000488085 PPLO60437 1756 aa13.22□□□□□ -0.29
PSMD2-216ENST00000488085 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.21□□□□□ -0.29
PSMD2-216ENST00000488085 TRIM52Q96A61 297 aa13.21□□□□□ -0.29
PSMD2-216ENST00000488085 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.3
PSMD2-216ENST00000488085 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
PSMD2-216ENST00000488085 SLC26A8Q96RN1 970 aa13.2□□□□□ -0.3
PSMD2-216ENST00000488085 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
PSMD2-216ENST00000488085 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
PSMD2-216ENST00000488085 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
PSMD2-216ENST00000488085 NKTRP30414 1462 aaKnown RBP13.19□□□□□ -0.3
PSMD2-216ENST00000488085 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
PSMD2-216ENST00000488085 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
PSMD2-216ENST00000488085 KCNA6P17658 529 aa13.19□□□□□ -0.3
PSMD2-216ENST00000488085 SETD1AO15047 1707 aaKnown RBP13.19□□□□□ -0.3
PSMD2-216ENST00000488085 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
PSMD2-216ENST00000488085 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
PSMD2-216ENST00000488085 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
PSMD2-216ENST00000488085 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
PSMD2-216ENST00000488085 TOM1O60784 492 aa13.15□□□□□ -0.3
PSMD2-216ENST00000488085 MPHOSPH9Q99550 1183 aa13.15□□□□□ -0.3
PSMD2-216ENST00000488085 PIK3R4Q99570 1358 aa13.15□□□□□ -0.3
PSMD2-216ENST00000488085 RAB3GAP2Q9H2M9 1393 aa13.15□□□□□ -0.3
PSMD2-216ENST00000488085 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
PSMD2-216ENST00000488085 FOXD1Q16676 465 aa13.13□□□□□ -0.31
PSMD2-216ENST00000488085 BCANQ96GW7 911 aa13.13□□□□□ -0.31
PSMD2-216ENST00000488085 TMEM94Q12767 1356 aa13.12□□□□□ -0.31
PSMD2-216ENST00000488085 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
PSMD2-216ENST00000488085 SPATA31E1Q6ZUB1 1445 aa13.12□□□□□ -0.31
PSMD2-216ENST00000488085 PTPRUQ92729 1446 aa13.12□□□□□ -0.31
PSMD2-216ENST00000488085 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
PSMD2-216ENST00000488085 HRCP23327 699 aa13.11□□□□□ -0.31
PSMD2-216ENST00000488085 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
PSMD2-216ENST00000488085 NCOA3Q9Y6Q9 1424 aa13.11□□□□□ -0.31
PSMD2-216ENST00000488085 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
PSMD2-216ENST00000488085 PROSER2Q86WR7 435 aaPredicted RBP13.1□□□□□ -0.31
PSMD2-216ENST00000488085 SENP3Q9H4L4 574 aaPredicted RBP13.1□□□□□ -0.31
PSMD2-216ENST00000488085 PIP4K2BP78356 416 aa13.09□□□□□ -0.31
PSMD2-216ENST00000488085 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.31
PSMD2-216ENST00000488085 METP08581 1390 aa13.07□□□□□ -0.32
PSMD2-216ENST00000488085 VGFO15240 615 aaPredicted RBP13.07□□□□□ -0.32
PSMD2-216ENST00000488085 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
PSMD2-216ENST00000488085 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 HSPA1LP34931 641 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 SCAF1Q9H7N4 1312 aaKnown RBP13.05□□□□□ -0.32
PSMD2-216ENST00000488085 MSH6P52701 1360 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 ANKRD30BQ9BXX2 1392 aa13.05□□□□□ -0.32
PSMD2-216ENST00000488085 KNDC1Q76NI1 1749 aa13.03□□□□□ -0.32
PSMD2-216ENST00000488085 ILDR2Q71H61 639 aa13.02□□□□□ -0.33
PSMD2-216ENST00000488085 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
PSMD2-216ENST00000488085 C19orf44Q9H6X5 657 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 DCCP43146 1447 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 PTCH1Q13635 1447 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 LAMC1P11047 1609 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 PHLPP1O60346 1717 aa13.01□□□□□ -0.33
PSMD2-216ENST00000488085 ASXL1Q8IXJ9 1541 aa13□□□□□ -0.33
PSMD2-216ENST00000488085 MYOM2P54296 1465 aa13□□□□□ -0.33
PSMD2-216ENST00000488085 RGL3Q3MIN7 710 aa13□□□□□ -0.33
PSMD2-216ENST00000488085 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
PSMD2-216ENST00000488085 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
PSMD2-216ENST00000488085 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
PSMD2-216ENST00000488085 CADPS2Q86UW7 1296 aa12.98□□□□□ -0.33
PSMD2-216ENST00000488085 COL16A1Q07092 1604 aaPredicted RBP12.97□□□□□ -0.33
PSMD2-216ENST00000488085 NHSL1Q5SYE7 1610 aa12.97□□□□□ -0.33
PSMD2-216ENST00000488085 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
PSMD2-216ENST00000488085 TECPR2O15040 1411 aa12.96□□□□□ -0.33
PSMD2-216ENST00000488085 ROBO2Q9HCK4 1378 aa12.96□□□□□ -0.33
PSMD2-216ENST00000488085 MST1RQ04912 1400 aa12.96□□□□□ -0.34
PSMD2-216ENST00000488085 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
PSMD2-216ENST00000488085 ATF3P18847 181 aa12.95□□□□□ -0.34
PSMD2-216ENST00000488085 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
PSMD2-216ENST00000488085 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
PSMD2-216ENST00000488085 CDC42BPGQ6DT37 1551 aa12.93□□□□□ -0.34
PSMD2-216ENST00000488085 LRPPRCP42704 1394 aaKnown RBP12.93□□□□□ -0.34
PSMD2-216ENST00000488085 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
PSMD2-216ENST00000488085 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
PSMD2-216ENST00000488085 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
PSMD2-216ENST00000488085 KIAA1210Q9ULL0 1709 aa12.91□□□□□ -0.34
PSMD2-216ENST00000488085 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
PSMD2-216ENST00000488085 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
PSMD2-216ENST00000488085 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
PSMD2-216ENST00000488085 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
PSMD2-216ENST00000488085 TMEM132EQ6IEE7 984 aa12.9□□□□□ -0.34
PSMD2-216ENST00000488085 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
PSMD2-216ENST00000488085 STAC3Q96MF2 364 aa12.9□□□□□ -0.34
PSMD2-216ENST00000488085 DLC1Q96QB1 1528 aa12.89□□□□□ -0.35
PSMD2-216ENST00000488085 SOCS7O14512 581 aa12.89□□□□□ -0.35
PSMD2-216ENST00000488085 CFAP70Q5T0N1 1121 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms