RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 EIF4G2P78344 907 aaKnown RBP eCLIP20.5■□□□□ 0.87
GCA-210ENST00000487445 TMEM131LA2VDJ0 1609 aa20.5■□□□□ 0.87
GCA-210ENST00000487445 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
GCA-210ENST00000487445 CFAP70Q5T0N1 1121 aa20.49■□□□□ 0.87
GCA-210ENST00000487445 MYOM2P54296 1465 aa20.49■□□□□ 0.87
GCA-210ENST00000487445 RALGAPBQ86X10 1494 aa20.49■□□□□ 0.87
GCA-210ENST00000487445 HSPA5P11021 654 aaKnown RBP20.48■□□□□ 0.87
GCA-210ENST00000487445 PTPRMP28827 1452 aa20.48■□□□□ 0.87
GCA-210ENST00000487445 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
GCA-210ENST00000487445 HDGFP51858 240 aaKnown RBP20.46■□□□□ 0.87
GCA-210ENST00000487445 NEXMIFQ5QGS0 1516 aa20.46■□□□□ 0.87
GCA-210ENST00000487445 KDM4FA0A1W2PPD8 638 aa20.44■□□□□ 0.86
GCA-210ENST00000487445 THEMISQ8N1K5 641 aaPredicted RBP20.44■□□□□ 0.86
GCA-210ENST00000487445 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
GCA-210ENST00000487445 TMEM2Q9UHN6 1383 aa20.43■□□□□ 0.86
GCA-210ENST00000487445 USP47Q96K76 1375 aa20.43■□□□□ 0.86
GCA-210ENST00000487445 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
GCA-210ENST00000487445 PIK3C2GO75747 1445 aa20.42■□□□□ 0.86
GCA-210ENST00000487445 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
GCA-210ENST00000487445 BCANQ96GW7 911 aa20.41■□□□□ 0.86
GCA-210ENST00000487445 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
GCA-210ENST00000487445 TXNDC2Q86VQ3 553 aa20.4■□□□□ 0.86
GCA-210ENST00000487445 GPRASP1Q5JY77 1395 aa20.4■□□□□ 0.86
GCA-210ENST00000487445 TMEM132EQ6IEE7 984 aa20.39■□□□□ 0.86
GCA-210ENST00000487445 EID1Q9Y6B2 187 aa20.39■□□□□ 0.86
GCA-210ENST00000487445 TRPM1Q7Z4N2 1603 aa20.39■□□□□ 0.85
GCA-210ENST00000487445 PPLO60437 1756 aa20.39■□□□□ 0.85
GCA-210ENST00000487445 IFT172Q9UG01 1749 aa20.39■□□□□ 0.85
GCA-210ENST00000487445 LTKP29376 864 aa20.38■□□□□ 0.85
GCA-210ENST00000487445 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
GCA-210ENST00000487445 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
GCA-210ENST00000487445 MYO3AQ8NEV4 1616 aa20.36■□□□□ 0.85
GCA-210ENST00000487445 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
GCA-210ENST00000487445 CEP170BQ9Y4F5 1589 aaPredicted RBP20.34■□□□□ 0.85
GCA-210ENST00000487445 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
GCA-210ENST00000487445 KDM5AP29375 1690 aaKnown RBP20.31■□□□□ 0.84
GCA-210ENST00000487445 STK26Q9P289 416 aa20.31■□□□□ 0.84
GCA-210ENST00000487445 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
GCA-210ENST00000487445 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
GCA-210ENST00000487445 ARHGAP23Q9P227 1491 aa20.29■□□□□ 0.84
GCA-210ENST00000487445 SLIT1O75093 1534 aa20.29■□□□□ 0.84
GCA-210ENST00000487445 C11orf95C9JLR9 678 aaPredicted RBP20.28■□□□□ 0.84
GCA-210ENST00000487445 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
GCA-210ENST00000487445 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
GCA-210ENST00000487445 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
GCA-210ENST00000487445 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
GCA-210ENST00000487445 EIF3AQ14152 1382 aaKnown RBP20.26■□□□□ 0.83
GCA-210ENST00000487445 KIAA1210Q9ULL0 1709 aa20.26■□□□□ 0.83
GCA-210ENST00000487445 ALKQ9UM73 1620 aa20.25■□□□□ 0.83
GCA-210ENST00000487445 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
GCA-210ENST00000487445 LAMC1P11047 1609 aa20.25■□□□□ 0.83
GCA-210ENST00000487445 WASHC2AQ641Q2 1341 aa20.25■□□□□ 0.83
GCA-210ENST00000487445 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
GCA-210ENST00000487445 SETD1BQ9UPS6 1966 aaKnown RBP20.25■□□□□ 0.83
GCA-210ENST00000487445 SETBP1Q9Y6X0 1596 aa20.24■□□□□ 0.83
GCA-210ENST00000487445 TESK2Q96S53 571 aa20.23■□□□□ 0.83
GCA-210ENST00000487445 METP08581 1390 aa20.23■□□□□ 0.83
GCA-210ENST00000487445 YTHDC2Q9H6S0 1430 aaKnown RBP20.22■□□□□ 0.83
GCA-210ENST00000487445 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
GCA-210ENST00000487445 HSPA2P54652 639 aa20.21■□□□□ 0.83
GCA-210ENST00000487445 ADAMTS13Q76LX8 1427 aa20.21■□□□□ 0.83
GCA-210ENST00000487445 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
GCA-210ENST00000487445 ZNF142P52746 1687 aaPredicted RBP20.21■□□□□ 0.83
GCA-210ENST00000487445 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
GCA-210ENST00000487445 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
GCA-210ENST00000487445 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
GCA-210ENST00000487445 ASXL1Q8IXJ9 1541 aa20.2■□□□□ 0.82
GCA-210ENST00000487445 TMF1P82094 1093 aa20.2■□□□□ 0.82
GCA-210ENST00000487445 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
GCA-210ENST00000487445 POGKQ9P215 609 aa20.18■□□□□ 0.82
GCA-210ENST00000487445 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
GCA-210ENST00000487445 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
GCA-210ENST00000487445 NRXN3Q9Y4C0 1643 aa20.17■□□□□ 0.82
GCA-210ENST00000487445 IQGAP1P46940 1657 aa20.17■□□□□ 0.82
GCA-210ENST00000487445 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
GCA-210ENST00000487445 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
GCA-210ENST00000487445 ABCC11Q96J66 1382 aa20.14■□□□□ 0.81
GCA-210ENST00000487445 MED14O60244 1454 aa20.13■□□□□ 0.81
GCA-210ENST00000487445 NPHP4O75161 1426 aaPredicted RBP20.13■□□□□ 0.81
GCA-210ENST00000487445 SLC24A1O60721 1099 aa20.13■□□□□ 0.81
GCA-210ENST00000487445 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
GCA-210ENST00000487445 MINK1Q8N4C8 1332 aaPredicted RBP20.11■□□□□ 0.81
GCA-210ENST00000487445 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
GCA-210ENST00000487445 LMTK3Q96Q04 1460 aa20.1■□□□□ 0.81
GCA-210ENST00000487445 PLEKHH1Q9ULM0 1364 aa20.09■□□□□ 0.81
GCA-210ENST00000487445 PTPRUQ92729 1446 aa20.08■□□□□ 0.81
GCA-210ENST00000487445 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.81
GCA-210ENST00000487445 SBNO2Q9Y2G9 1366 aa20.08■□□□□ 0.8
GCA-210ENST00000487445 ROBO2Q9HCK4 1378 aa20.06■□□□□ 0.8
GCA-210ENST00000487445 EVC2Q86UK5 1308 aa20.06■□□□□ 0.8
GCA-210ENST00000487445 KCNA6P17658 529 aa20.06■□□□□ 0.8
GCA-210ENST00000487445 SIRT1Q96EB6 747 aa20.06■□□□□ 0.8
GCA-210ENST00000487445 DIP2AQ14689 1571 aa20.05■□□□□ 0.8
GCA-210ENST00000487445 PIK3R4Q99570 1358 aa20.04■□□□□ 0.8
GCA-210ENST00000487445 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
GCA-210ENST00000487445 TECPR2O15040 1411 aa20.04■□□□□ 0.8
GCA-210ENST00000487445 ARHGEF28Q8N1W1 1705 aaKnown RBP20.03■□□□□ 0.8
GCA-210ENST00000487445 SRPK2P78362 688 aaKnown RBP20.03■□□□□ 0.8
GCA-210ENST00000487445 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
GCA-210ENST00000487445 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms