RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 HDGFP51858 240 aaKnown RBP9.93□□□□□ -0.82
LINC00888-204ENST00000487386 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
LINC00888-204ENST00000487386 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
LINC00888-204ENST00000487386 TRIM66O15016 1216 aa9.91□□□□□ -0.82
LINC00888-204ENST00000487386 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
LINC00888-204ENST00000487386 DAXXQ9UER7 740 aaPredicted RBP9.91□□□□□ -0.82
LINC00888-204ENST00000487386 AMHR2Q16671 573 aa9.9□□□□□ -0.82
LINC00888-204ENST00000487386 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
LINC00888-204ENST00000487386 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
LINC00888-204ENST00000487386 HCSTQ9UBK5 93 aa9.89□□□□□ -0.83
LINC00888-204ENST00000487386 PTPN5P54829 565 aa9.87□□□□□ -0.83
LINC00888-204ENST00000487386 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
LINC00888-204ENST00000487386 WBP1LQ9NX94 342 aa9.87□□□□□ -0.83
LINC00888-204ENST00000487386 HPS5Q9UPZ3 1129 aa9.87□□□□□ -0.83
LINC00888-204ENST00000487386 SLC10A3P09131 477 aa9.86□□□□□ -0.83
LINC00888-204ENST00000487386 CLCN1P35523 988 aa9.86□□□□□ -0.83
LINC00888-204ENST00000487386 REPIN1Q9BWE0 567 aaKnown RBP9.86□□□□□ -0.83
LINC00888-204ENST00000487386 PPP4CP60510 307 aa9.85□□□□□ -0.83
LINC00888-204ENST00000487386 GPCPD1Q9NPB8 672 aa9.85□□□□□ -0.83
LINC00888-204ENST00000487386 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
LINC00888-204ENST00000487386 SLC4A3P48751 1232 aa9.84□□□□□ -0.83
LINC00888-204ENST00000487386 NYAP1Q6ZVC0 841 aa9.84□□□□□ -0.83
LINC00888-204ENST00000487386 PDE4DQ08499 809 aa9.83□□□□□ -0.84
LINC00888-204ENST00000487386 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
LINC00888-204ENST00000487386 RNF40O75150 1001 aa9.82□□□□□ -0.84
LINC00888-204ENST00000487386 PARP9Q8IXQ6 854 aa9.82□□□□□ -0.84
LINC00888-204ENST00000487386 FAM217BQ9NTX9 383 aaPredicted RBP9.82□□□□□ -0.84
LINC00888-204ENST00000487386 DDX11L8A8MPP1 907 aa9.81□□□□□ -0.84
LINC00888-204ENST00000487386 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
LINC00888-204ENST00000487386 CD46P15529 392 aa9.8□□□□□ -0.84
LINC00888-204ENST00000487386 APLP1P51693 650 aa9.8□□□□□ -0.84
LINC00888-204ENST00000487386 TTLL12Q14166 644 aaPredicted RBP9.79□□□□□ -0.84
LINC00888-204ENST00000487386 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
LINC00888-204ENST00000487386 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
LINC00888-204ENST00000487386 CFHP08603 1231 aa9.77□□□□□ -0.85
LINC00888-204ENST00000487386 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
LINC00888-204ENST00000487386 GCGRP47871 477 aa9.77□□□□□ -0.85
LINC00888-204ENST00000487386 RDH13Q8NBN7 331 aa9.77□□□□□ -0.85
LINC00888-204ENST00000487386 ACTN4O43707 911 aaKnown RBP9.76□□□□□ -0.85
LINC00888-204ENST00000487386 PRR14Q9BWN1 585 aa9.76□□□□□ -0.85
LINC00888-204ENST00000487386 MS4A1P11836 297 aa9.74□□□□□ -0.85
LINC00888-204ENST00000487386 KMT5BQ4FZB7 885 aa9.74□□□□□ -0.85
LINC00888-204ENST00000487386 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
LINC00888-204ENST00000487386 TJAP1Q5JTD0 557 aa9.71□□□□□ -0.86
LINC00888-204ENST00000487386 GPBP1L1Q9HC44 474 aaPredicted RBP9.71□□□□□ -0.86
LINC00888-204ENST00000487386 MTRQ99707 1265 aa9.69□□□□□ -0.86
LINC00888-204ENST00000487386 KDM4CQ9H3R0 1056 aa9.69□□□□□ -0.86
LINC00888-204ENST00000487386 PCDHB3Q9Y5E6 796 aa9.69□□□□□ -0.86
LINC00888-204ENST00000487386 KDM4AO75164 1064 aa9.68□□□□□ -0.86
LINC00888-204ENST00000487386 BRPF1P55201 1214 aaPredicted RBP9.68□□□□□ -0.86
LINC00888-204ENST00000487386 FUT2Q10981 343 aa9.68□□□□□ -0.86
LINC00888-204ENST00000487386 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
LINC00888-204ENST00000487386 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
LINC00888-204ENST00000487386 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
LINC00888-204ENST00000487386 BLOC1S3Q6QNY0 202 aa9.67□□□□□ -0.86
LINC00888-204ENST00000487386 USP46P62068 366 aa9.66□□□□□ -0.86
LINC00888-204ENST00000487386 MORN1Q5T089 497 aa9.66□□□□□ -0.86
LINC00888-204ENST00000487386 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
LINC00888-204ENST00000487386 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
LINC00888-204ENST00000487386 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
LINC00888-204ENST00000487386 SPIRE2Q8WWL2 714 aa9.65□□□□□ -0.86
LINC00888-204ENST00000487386 COPS2P61201 443 aa9.64□□□□□ -0.87
LINC00888-204ENST00000487386 ZNF516Q92618 1163 aa9.64□□□□□ -0.87
LINC00888-204ENST00000487386 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
LINC00888-204ENST00000487386 HOXA2O43364 376 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 ZPR1O75312 459 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 KCNC4Q03721 635 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 SCUBE3Q8IX30 993 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 FAM117AQ9C073 453 aa9.63□□□□□ -0.87
LINC00888-204ENST00000487386 NR1I2O75469 434 aa9.62□□□□□ -0.87
LINC00888-204ENST00000487386 GRIPAP1Q4V328 841 aa9.62□□□□□ -0.87
LINC00888-204ENST00000487386 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
LINC00888-204ENST00000487386 SLC27A5Q9Y2P5 690 aa9.62□□□□□ -0.87
LINC00888-204ENST00000487386 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
LINC00888-204ENST00000487386 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
LINC00888-204ENST00000487386 HLA-CQ95604 372 aa9.6□□□□□ -0.87
LINC00888-204ENST00000487386 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
LINC00888-204ENST00000487386 MOXD2PA6NHM9 499 aa9.59□□□□□ -0.87
LINC00888-204ENST00000487386 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
LINC00888-204ENST00000487386 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
LINC00888-204ENST00000487386 NDUFV2P19404 249 aa9.58□□□□□ -0.88
LINC00888-204ENST00000487386 GJA5P36382 358 aa9.58□□□□□ -0.88
LINC00888-204ENST00000487386 NKX2-3Q8TAU0 364 aa9.58□□□□□ -0.88
LINC00888-204ENST00000487386 MYSM1Q5VVJ2 828 aa9.57□□□□□ -0.88
LINC00888-204ENST00000487386 BRICD5Q6PL45 260 aa9.57□□□□□ -0.88
LINC00888-204ENST00000487386 PCDHGC3Q9UN70 934 aa9.57□□□□□ -0.88
LINC00888-204ENST00000487386 SPTLC1O15269 473 aa9.56□□□□□ -0.88
LINC00888-204ENST00000487386 GUCA2AQ02747 115 aa9.56□□□□□ -0.88
LINC00888-204ENST00000487386 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
LINC00888-204ENST00000487386 TLL1O43897 1013 aa9.55□□□□□ -0.88
LINC00888-204ENST00000487386 FDX1P10109 184 aa9.55□□□□□ -0.88
LINC00888-204ENST00000487386 Q3C1V9 767 aa9.55□□□□□ -0.88
LINC00888-204ENST00000487386 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
LINC00888-204ENST00000487386 FMNL1O95466 1100 aaPredicted RBP9.54□□□□□ -0.88
LINC00888-204ENST00000487386 RNF19BQ6ZMZ0 732 aa9.54□□□□□ -0.88
LINC00888-204ENST00000487386 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
LINC00888-204ENST00000487386 ADH1BP00325 375 aa9.53□□□□□ -0.88
LINC00888-204ENST00000487386 TUSC1Q2TAM9 212 aa9.53□□□□□ -0.88
LINC00888-204ENST00000487386 SPSB2Q99619 263 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms