RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
GABPA-203ENST00000487266 SLC26A8Q96RN1 970 aa23.88■■□□□ 1.41
GABPA-203ENST00000487266 TRPM2O94759 1503 aa23.88■■□□□ 1.41
GABPA-203ENST00000487266 XIRP1Q702N8 1843 aaKnown RBP23.87■■□□□ 1.41
GABPA-203ENST00000487266 NUTM2DQ5VT03 806 aaPredicted RBP23.87■■□□□ 1.41
GABPA-203ENST00000487266 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
GABPA-203ENST00000487266 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
GABPA-203ENST00000487266 PLEKHG1Q9ULL1 1385 aa23.83■■□□□ 1.41
GABPA-203ENST00000487266 BCANQ96GW7 911 aa23.83■■□□□ 1.41
GABPA-203ENST00000487266 NWD1Q149M9 1564 aa23.82■■□□□ 1.4
GABPA-203ENST00000487266 KIF1BO60333 1816 aa23.8■■□□□ 1.4
GABPA-203ENST00000487266 SLC4A1APQ9BWU0 796 aaKnown RBP23.8■■□□□ 1.4
GABPA-203ENST00000487266 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
GABPA-203ENST00000487266 FOXD1Q16676 465 aa23.78■■□□□ 1.4
GABPA-203ENST00000487266 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
GABPA-203ENST00000487266 ADAMTS13Q76LX8 1427 aa23.77■■□□□ 1.4
GABPA-203ENST00000487266 CHD2O14647 1828 aaKnown RBP23.77■■□□□ 1.4
GABPA-203ENST00000487266 NRXN3Q9Y4C0 1643 aa23.77■■□□□ 1.4
GABPA-203ENST00000487266 NEXMIFQ5QGS0 1516 aa23.75■■□□□ 1.39
GABPA-203ENST00000487266 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
GABPA-203ENST00000487266 RBM33Q96EV2 1170 aaKnown RBP23.75■■□□□ 1.39
GABPA-203ENST00000487266 KCNA6P17658 529 aa23.74■■□□□ 1.39
GABPA-203ENST00000487266 TOM1O60784 492 aa23.73■■□□□ 1.39
GABPA-203ENST00000487266 HDGFP51858 240 aaKnown RBP23.73■■□□□ 1.39
GABPA-203ENST00000487266 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
GABPA-203ENST00000487266 TMEM94Q12767 1356 aa23.73■■□□□ 1.39
GABPA-203ENST00000487266 SETD5Q9C0A6 1442 aa23.73■■□□□ 1.39
GABPA-203ENST00000487266 NKTRP30414 1462 aaKnown RBP23.73■■□□□ 1.39
GABPA-203ENST00000487266 DIP2AQ14689 1571 aa23.73■■□□□ 1.39
GABPA-203ENST00000487266 SETBP1Q9Y6X0 1596 aa23.69■■□□□ 1.38
GABPA-203ENST00000487266 RAB3GAP2Q9H2M9 1393 aa23.68■■□□□ 1.38
GABPA-203ENST00000487266 MPHOSPH9Q99550 1183 aa23.67■■□□□ 1.38
GABPA-203ENST00000487266 TBX22Q9Y458 520 aa23.67■■□□□ 1.38
GABPA-203ENST00000487266 HSPA1LP34931 641 aa23.66■■□□□ 1.38
GABPA-203ENST00000487266 PROSER2Q86WR7 435 aaPredicted RBP23.66■■□□□ 1.38
GABPA-203ENST00000487266 PPLO60437 1756 aa23.65■■□□□ 1.38
GABPA-203ENST00000487266 PTPRUQ92729 1446 aa23.65■■□□□ 1.38
GABPA-203ENST00000487266 XRN1Q8IZH2 1706 aaKnown RBP23.62■■□□□ 1.37
GABPA-203ENST00000487266 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
GABPA-203ENST00000487266 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
GABPA-203ENST00000487266 METP08581 1390 aa23.59■■□□□ 1.37
GABPA-203ENST00000487266 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
GABPA-203ENST00000487266 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
GABPA-203ENST00000487266 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
GABPA-203ENST00000487266 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
GABPA-203ENST00000487266 ROBO1Q9Y6N7 1651 aa23.56■■□□□ 1.36
GABPA-203ENST00000487266 MSH6P52701 1360 aa23.55■■□□□ 1.36
GABPA-203ENST00000487266 DISP3Q9P2K9 1392 aa23.53■■□□□ 1.36
GABPA-203ENST00000487266 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
GABPA-203ENST00000487266 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
GABPA-203ENST00000487266 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
GABPA-203ENST00000487266 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
GABPA-203ENST00000487266 VGFO15240 615 aaPredicted RBP23.49■■□□□ 1.35
GABPA-203ENST00000487266 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
GABPA-203ENST00000487266 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
GABPA-203ENST00000487266 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
GABPA-203ENST00000487266 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
GABPA-203ENST00000487266 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
GABPA-203ENST00000487266 NCOA3Q9Y6Q9 1424 aa23.47■■□□□ 1.35
GABPA-203ENST00000487266 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
GABPA-203ENST00000487266 SLAIN2Q9P270 581 aa23.42■■□□□ 1.34
GABPA-203ENST00000487266 ANKRD30BQ9BXX2 1392 aa23.41■■□□□ 1.34
GABPA-203ENST00000487266 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
GABPA-203ENST00000487266 PHLPP1O60346 1717 aa23.41■■□□□ 1.34
GABPA-203ENST00000487266 PIK3C2GO75747 1445 aa23.41■■□□□ 1.34
GABPA-203ENST00000487266 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
GABPA-203ENST00000487266 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
GABPA-203ENST00000487266 ADGRL3Q9HAR2 1447 aa23.39■■□□□ 1.33
GABPA-203ENST00000487266 ATF3P18847 181 aa23.38■■□□□ 1.33
GABPA-203ENST00000487266 DCCP43146 1447 aa23.37■■□□□ 1.33
GABPA-203ENST00000487266 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
GABPA-203ENST00000487266 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
GABPA-203ENST00000487266 HRCP23327 699 aa23.36■■□□□ 1.33
GABPA-203ENST00000487266 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
GABPA-203ENST00000487266 MYOM2P54296 1465 aa23.36■■□□□ 1.33
GABPA-203ENST00000487266 MST1RQ04912 1400 aa23.35■■□□□ 1.33
GABPA-203ENST00000487266 COL16A1Q07092 1604 aaPredicted RBP23.35■■□□□ 1.33
GABPA-203ENST00000487266 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
GABPA-203ENST00000487266 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.32
GABPA-203ENST00000487266 AHDC1Q5TGY3 1603 aaPredicted RBP23.31■■□□□ 1.32
GABPA-203ENST00000487266 TMEM132EQ6IEE7 984 aa23.31■■□□□ 1.32
GABPA-203ENST00000487266 LAMC1P11047 1609 aa23.3■■□□□ 1.32
GABPA-203ENST00000487266 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
GABPA-203ENST00000487266 STK26Q9P289 416 aa23.29■■□□□ 1.32
GABPA-203ENST00000487266 TECPR2O15040 1411 aa23.28■■□□□ 1.32
GABPA-203ENST00000487266 LRPPRCP42704 1394 aaKnown RBP23.27■■□□□ 1.32
GABPA-203ENST00000487266 NHSL1Q5SYE7 1610 aa23.27■■□□□ 1.32
GABPA-203ENST00000487266 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
GABPA-203ENST00000487266 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
GABPA-203ENST00000487266 YTHDC2Q9H6S0 1430 aaKnown RBP23.25■■□□□ 1.31
GABPA-203ENST00000487266 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
GABPA-203ENST00000487266 CDC42BPGQ6DT37 1551 aa23.23■■□□□ 1.31
GABPA-203ENST00000487266 WAPLQ7Z5K2 1190 aa23.23■■□□□ 1.31
GABPA-203ENST00000487266 C14orf93Q9H972 538 aaKnown RBP23.23■■□□□ 1.31
GABPA-203ENST00000487266 DHX57Q6P158 1386 aaKnown RBP23.22■■□□□ 1.31
GABPA-203ENST00000487266 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
GABPA-203ENST00000487266 DCAF11Q8TEB1 546 aa23.21■■□□□ 1.31
GABPA-203ENST00000487266 DDX17Q92841 729 aaKnown RBP23.21■■□□□ 1.31
GABPA-203ENST00000487266 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
GABPA-203ENST00000487266 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms