RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 KCNA6P17658 529 aa19.58■□□□□ 0.72
SSR4-211ENST00000486204 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
SSR4-211ENST00000486204 E9PCH4 1651 aa19.56■□□□□ 0.72
SSR4-211ENST00000486204 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
SSR4-211ENST00000486204 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
SSR4-211ENST00000486204 ARHGAP31Q2M1Z3 1444 aa19.53■□□□□ 0.72
SSR4-211ENST00000486204 MEX3CQ5U5Q3 659 aaKnown RBP19.53■□□□□ 0.72
SSR4-211ENST00000486204 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
SSR4-211ENST00000486204 KANK1Q14678 1352 aa19.52■□□□□ 0.72
SSR4-211ENST00000486204 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.72
SSR4-211ENST00000486204 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
SSR4-211ENST00000486204 MSH6P52701 1360 aa19.5■□□□□ 0.71
SSR4-211ENST00000486204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.71
SSR4-211ENST00000486204 PHLPP1O60346 1717 aa19.5■□□□□ 0.71
SSR4-211ENST00000486204 SPATA31A6Q5VVP1 1343 aa19.49■□□□□ 0.71
SSR4-211ENST00000486204 RXRBP28702 533 aa19.48■□□□□ 0.71
SSR4-211ENST00000486204 SPHKAPQ2M3C7 1700 aa19.46■□□□□ 0.71
SSR4-211ENST00000486204 LRP6O75581 1613 aa19.46■□□□□ 0.71
SSR4-211ENST00000486204 RPRD2Q5VT52 1461 aaKnown RBP19.46■□□□□ 0.71
SSR4-211ENST00000486204 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
SSR4-211ENST00000486204 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
SSR4-211ENST00000486204 NUP155O75694 1391 aa19.43■□□□□ 0.7
SSR4-211ENST00000486204 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
SSR4-211ENST00000486204 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
SSR4-211ENST00000486204 BCANQ96GW7 911 aa19.42■□□□□ 0.7
SSR4-211ENST00000486204 NOS1P29475 1434 aa19.42■□□□□ 0.7
SSR4-211ENST00000486204 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
SSR4-211ENST00000486204 IDI1Q13907 227 aa19.41■□□□□ 0.7
SSR4-211ENST00000486204 SETD5Q9C0A6 1442 aa19.39■□□□□ 0.69
SSR4-211ENST00000486204 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
SSR4-211ENST00000486204 CDK12Q9NYV4 1490 aaPredicted RBP19.38■□□□□ 0.69
SSR4-211ENST00000486204 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
SSR4-211ENST00000486204 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
SSR4-211ENST00000486204 NUTM2EB1AL46 878 aaPredicted RBP19.36■□□□□ 0.69
SSR4-211ENST00000486204 NUTM2AQ8IVF1 878 aaPredicted RBP19.36■□□□□ 0.69
SSR4-211ENST00000486204 RAB3GAP2Q9H2M9 1393 aa19.34■□□□□ 0.69
SSR4-211ENST00000486204 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
SSR4-211ENST00000486204 ADGRB3O60242 1522 aa19.33■□□□□ 0.68
SSR4-211ENST00000486204 TMEM131LA2VDJ0 1609 aa19.33■□□□□ 0.68
SSR4-211ENST00000486204 AFF2P51816 1311 aa19.32■□□□□ 0.68
SSR4-211ENST00000486204 CLTCL1P53675 1640 aa19.32■□□□□ 0.68
SSR4-211ENST00000486204 TRPM2O94759 1503 aa19.31■□□□□ 0.68
SSR4-211ENST00000486204 KIF1BO60333 1816 aa19.3■□□□□ 0.68
SSR4-211ENST00000486204 ATF3P18847 181 aa19.3■□□□□ 0.68
SSR4-211ENST00000486204 CADPS2Q86UW7 1296 aa19.3■□□□□ 0.68
SSR4-211ENST00000486204 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
SSR4-211ENST00000486204 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
SSR4-211ENST00000486204 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
SSR4-211ENST00000486204 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
SSR4-211ENST00000486204 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
SSR4-211ENST00000486204 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
SSR4-211ENST00000486204 QTRT2Q9H974 415 aaKnown RBP19.28■□□□□ 0.68
SSR4-211ENST00000486204 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
SSR4-211ENST00000486204 RGS12O14924 1447 aa19.25■□□□□ 0.67
SSR4-211ENST00000486204 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
SSR4-211ENST00000486204 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
SSR4-211ENST00000486204 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
SSR4-211ENST00000486204 FOXD1Q16676 465 aa19.25■□□□□ 0.67
SSR4-211ENST00000486204 ZRANB1Q9UGI0 708 aa19.25■□□□□ 0.67
SSR4-211ENST00000486204 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
SSR4-211ENST00000486204 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
SSR4-211ENST00000486204 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
SSR4-211ENST00000486204 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
SSR4-211ENST00000486204 ACIN1Q9UKV3 1341 aaKnown RBP19.23■□□□□ 0.67
SSR4-211ENST00000486204 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
SSR4-211ENST00000486204 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
SSR4-211ENST00000486204 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
SSR4-211ENST00000486204 HRCP23327 699 aa19.2■□□□□ 0.66
SSR4-211ENST00000486204 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
SSR4-211ENST00000486204 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
SSR4-211ENST00000486204 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
SSR4-211ENST00000486204 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
SSR4-211ENST00000486204 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
SSR4-211ENST00000486204 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
SSR4-211ENST00000486204 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
SSR4-211ENST00000486204 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
SSR4-211ENST00000486204 PPLO60437 1756 aa19.16■□□□□ 0.66
SSR4-211ENST00000486204 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.15■□□□□ 0.66
SSR4-211ENST00000486204 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
SSR4-211ENST00000486204 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
SSR4-211ENST00000486204 NEXMIFQ5QGS0 1516 aa19.13■□□□□ 0.65
SSR4-211ENST00000486204 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
SSR4-211ENST00000486204 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
SSR4-211ENST00000486204 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
SSR4-211ENST00000486204 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
SSR4-211ENST00000486204 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
SSR4-211ENST00000486204 NRXN3Q9Y4C0 1643 aa19.1■□□□□ 0.65
SSR4-211ENST00000486204 PNPLA6Q8IY17 1366 aa19.09■□□□□ 0.65
SSR4-211ENST00000486204 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
SSR4-211ENST00000486204 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.65
SSR4-211ENST00000486204 CCDC125Q86Z20 511 aa19.08■□□□□ 0.64
SSR4-211ENST00000486204 USP21Q9UK80 565 aa19.08■□□□□ 0.64
SSR4-211ENST00000486204 DCCP43146 1447 aa19.08■□□□□ 0.64
SSR4-211ENST00000486204 TRPC5Q9UL62 973 aaPredicted RBP19.07■□□□□ 0.64
SSR4-211ENST00000486204 SPATA31E1Q6ZUB1 1445 aa19.07■□□□□ 0.64
SSR4-211ENST00000486204 MST1RQ04912 1400 aa19.06■□□□□ 0.64
SSR4-211ENST00000486204 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
SSR4-211ENST00000486204 NHSL1Q5SYE7 1610 aa19.05■□□□□ 0.64
SSR4-211ENST00000486204 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
SSR4-211ENST00000486204 FNBP4Q8N3X1 1017 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms