RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SSR4-210ENST00000485612 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
SSR4-210ENST00000485612 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
SSR4-210ENST00000485612 AFF2P51816 1311 aa19.32■□□□□ 0.68
SSR4-210ENST00000485612 ATF3P18847 181 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 CADPS2Q86UW7 1296 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 KANK1Q14678 1352 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 CROCC2H7BZ55 1655 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
SSR4-210ENST00000485612 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
SSR4-210ENST00000485612 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
SSR4-210ENST00000485612 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
SSR4-210ENST00000485612 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
SSR4-210ENST00000485612 QTRT2Q9H974 415 aaKnown RBP19.28■□□□□ 0.68
SSR4-210ENST00000485612 KIF15Q9NS87 1388 aa19.28■□□□□ 0.68
SSR4-210ENST00000485612 ERBINQ96RT1 1412 aa19.27■□□□□ 0.68
SSR4-210ENST00000485612 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
SSR4-210ENST00000485612 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
SSR4-210ENST00000485612 RGS12O14924 1447 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
SSR4-210ENST00000485612 HDGFP51858 240 aaKnown RBP19.25■□□□□ 0.67
SSR4-210ENST00000485612 FOXD1Q16676 465 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 ZRANB1Q9UGI0 708 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 TBX22Q9Y458 520 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
SSR4-210ENST00000485612 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
SSR4-210ENST00000485612 BRINP3Q76B58 766 aa19.24■□□□□ 0.67
SSR4-210ENST00000485612 C8orf37Q96NL8 207 aa19.23■□□□□ 0.67
SSR4-210ENST00000485612 NOS1P29475 1434 aa19.23■□□□□ 0.67
SSR4-210ENST00000485612 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
SSR4-210ENST00000485612 LMTK2Q8IWU2 1503 aa19.2■□□□□ 0.66
SSR4-210ENST00000485612 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
SSR4-210ENST00000485612 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
SSR4-210ENST00000485612 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.2■□□□□ 0.66
SSR4-210ENST00000485612 NGLY1Q96IV0 654 aa19.19■□□□□ 0.66
SSR4-210ENST00000485612 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
SSR4-210ENST00000485612 RIMS2Q9UQ26 1411 aa19.18■□□□□ 0.66
SSR4-210ENST00000485612 LRRC59Q96AG4 307 aaKnown RBP19.18■□□□□ 0.66
SSR4-210ENST00000485612 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
SSR4-210ENST00000485612 ABCC5O15440 1437 aa19.17■□□□□ 0.66
SSR4-210ENST00000485612 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.15■□□□□ 0.66
SSR4-210ENST00000485612 AMOTL2Q9Y2J4 779 aa19.13■□□□□ 0.65
SSR4-210ENST00000485612 PIK3R4Q99570 1358 aa19.13■□□□□ 0.65
SSR4-210ENST00000485612 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
SSR4-210ENST00000485612 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
SSR4-210ENST00000485612 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
SSR4-210ENST00000485612 ADAMTS2O95450 1211 aa19.11■□□□□ 0.65
SSR4-210ENST00000485612 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
SSR4-210ENST00000485612 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
SSR4-210ENST00000485612 PNPLA6Q8IY17 1366 aa19.09■□□□□ 0.65
SSR4-210ENST00000485612 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
SSR4-210ENST00000485612 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
SSR4-210ENST00000485612 CCDC125Q86Z20 511 aa19.08■□□□□ 0.64
SSR4-210ENST00000485612 USP21Q9UK80 565 aa19.08■□□□□ 0.64
SSR4-210ENST00000485612 DCCP43146 1447 aa19.08■□□□□ 0.64
SSR4-210ENST00000485612 DAPK1P53355 1430 aa19.08■□□□□ 0.64
SSR4-210ENST00000485612 MYO5BQ9ULV0 1848 aa19.07■□□□□ 0.64
SSR4-210ENST00000485612 TRPC5Q9UL62 973 aaPredicted RBP19.07■□□□□ 0.64
SSR4-210ENST00000485612 RPRD2Q5VT52 1461 aaKnown RBP19.06■□□□□ 0.64
SSR4-210ENST00000485612 TMEM131LA2VDJ0 1609 aa19.06■□□□□ 0.64
SSR4-210ENST00000485612 MST1RQ04912 1400 aa19.06■□□□□ 0.64
SSR4-210ENST00000485612 NHSL1Q5SYE7 1610 aa19.05■□□□□ 0.64
SSR4-210ENST00000485612 PTPRUQ92729 1446 aa19.05■□□□□ 0.64
SSR4-210ENST00000485612 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
SSR4-210ENST00000485612 TRPM2O94759 1503 aa19.02■□□□□ 0.64
SSR4-210ENST00000485612 FNBP4Q8N3X1 1017 aaPredicted RBP19.01■□□□□ 0.63
SSR4-210ENST00000485612 APLP2Q06481 763 aa18.98■□□□□ 0.63
SSR4-210ENST00000485612 EP400Q96L91 3159 aa18.97■□□□□ 0.63
SSR4-210ENST00000485612 ATRNO75882 1429 aa18.97■□□□□ 0.63
SSR4-210ENST00000485612 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
SSR4-210ENST00000485612 ADGRL2O95490 1459 aa18.93■□□□□ 0.62
SSR4-210ENST00000485612 SOS2Q07890 1332 aaPredicted RBP18.93■□□□□ 0.62
SSR4-210ENST00000485612 UNC13BO14795 1591 aa18.92■□□□□ 0.62
SSR4-210ENST00000485612 ADGRL3Q9HAR2 1447 aa18.91■□□□□ 0.62
SSR4-210ENST00000485612 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
SSR4-210ENST00000485612 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
SSR4-210ENST00000485612 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
SSR4-210ENST00000485612 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
SSR4-210ENST00000485612 METP08581 1390 aa18.9■□□□□ 0.62
SSR4-210ENST00000485612 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
SSR4-210ENST00000485612 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
SSR4-210ENST00000485612 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
SSR4-210ENST00000485612 BCL9LQ86UU0 1499 aa18.88■□□□□ 0.61
SSR4-210ENST00000485612 SF3B2Q13435 895 aaKnown RBP18.86■□□□□ 0.61
SSR4-210ENST00000485612 E9PCH4 1651 aa18.85■□□□□ 0.61
SSR4-210ENST00000485612 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
SSR4-210ENST00000485612 LAMC1P11047 1609 aa18.84■□□□□ 0.61
SSR4-210ENST00000485612 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
SSR4-210ENST00000485612 LRP5O75197 1615 aa18.83■□□□□ 0.61
SSR4-210ENST00000485612 ZNF326Q5BKZ1 582 aaKnown RBP18.83■□□□□ 0.6
SSR4-210ENST00000485612 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
SSR4-210ENST00000485612 COL22A1Q8NFW1 1626 aaPredicted RBP18.81■□□□□ 0.6
SSR4-210ENST00000485612 MYOM2P54296 1465 aa18.8■□□□□ 0.6
SSR4-210ENST00000485612 PSDA5PKW4 1024 aaPredicted RBP18.79■□□□□ 0.6
SSR4-210ENST00000485612 UNC5CLQ8IV45 518 aa18.79■□□□□ 0.6
SSR4-210ENST00000485612 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms