RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 AHDC1Q5TGY3 1603 aaPredicted RBP28.77■■■□□ 2.2
DDR1-245ENST00000484556 ERBINQ96RT1 1412 aa28.77■■■□□ 2.2
DDR1-245ENST00000484556 CDK12Q9NYV4 1490 aaPredicted RBP28.75■■■□□ 2.19
DDR1-245ENST00000484556 CROCC2H7BZ55 1655 aa28.74■■■□□ 2.19
DDR1-245ENST00000484556 MYOM3Q5VTT5 1437 aa28.71■■■□□ 2.19
DDR1-245ENST00000484556 NUTM2BA6NNL0 878 aaPredicted RBP28.71■■■□□ 2.19
DDR1-245ENST00000484556 NUTM2EB1AL46 878 aaPredicted RBP28.71■■■□□ 2.19
DDR1-245ENST00000484556 NUTM2AQ8IVF1 878 aaPredicted RBP28.71■■■□□ 2.19
DDR1-245ENST00000484556 RRP7BPQ9NSQ0 103 aa28.71■■■□□ 2.19
DDR1-245ENST00000484556 KANK1Q14678 1352 aa28.71■■■□□ 2.19
DDR1-245ENST00000484556 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.71■■■□□ 2.19
DDR1-245ENST00000484556 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
DDR1-245ENST00000484556 C14orf37Q86TY3 774 aa28.7■■■□□ 2.18
DDR1-245ENST00000484556 DIP2AQ14689 1571 aa28.7■■■□□ 2.18
DDR1-245ENST00000484556 LMTK2Q8IWU2 1503 aa28.69■■■□□ 2.18
DDR1-245ENST00000484556 RGS12O14924 1447 aa28.68■■■□□ 2.18
DDR1-245ENST00000484556 NOS1P29475 1434 aa28.68■■■□□ 2.18
DDR1-245ENST00000484556 AFF2P51816 1311 aa28.67■■■□□ 2.18
DDR1-245ENST00000484556 PLEKHG1Q9ULL1 1385 aa28.64■■■□□ 2.18
DDR1-245ENST00000484556 ZFYVE9O95405 1425 aa28.64■■■□□ 2.18
DDR1-245ENST00000484556 GCC2Q8IWJ2 1684 aa28.63■■■□□ 2.17
DDR1-245ENST00000484556 ABCC5O15440 1437 aa28.61■■■□□ 2.17
DDR1-245ENST00000484556 NCOA3Q9Y6Q9 1424 aa28.61■■■□□ 2.17
DDR1-245ENST00000484556 PPP1R15AO75807 674 aaPredicted RBP28.6■■■□□ 2.17
DDR1-245ENST00000484556 CADPS2Q86UW7 1296 aa28.6■■■□□ 2.17
DDR1-245ENST00000484556 RIMS2Q9UQ26 1411 aa28.6■■■□□ 2.17
DDR1-245ENST00000484556 ATF3P18847 181 aa28.59■■■□□ 2.17
DDR1-245ENST00000484556 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
DDR1-245ENST00000484556 BRINP3Q76B58 766 aa28.57■■■□□ 2.16
DDR1-245ENST00000484556 NUTM2DQ5VT03 806 aaPredicted RBP28.56■■■□□ 2.16
DDR1-245ENST00000484556 SLC52A1Q9NWF4 448 aa28.56■■■□□ 2.16
DDR1-245ENST00000484556 C19orf44Q9H6X5 657 aa28.55■■■□□ 2.16
DDR1-245ENST00000484556 C8orf37Q96NL8 207 aa28.53■■■□□ 2.16
DDR1-245ENST00000484556 TBX22Q9Y458 520 aa28.53■■■□□ 2.16
DDR1-245ENST00000484556 TMEM131LA2VDJ0 1609 aa28.53■■■□□ 2.16
DDR1-245ENST00000484556 ASXL1Q8IXJ9 1541 aa28.53■■■□□ 2.16
DDR1-245ENST00000484556 DAPK1P53355 1430 aa28.52■■■□□ 2.16
DDR1-245ENST00000484556 PTPN23Q9H3S7 1636 aa28.52■■■□□ 2.16
DDR1-245ENST00000484556 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
DDR1-245ENST00000484556 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
DDR1-245ENST00000484556 RBM6P78332 1123 aaKnown RBP28.51■■■□□ 2.15
DDR1-245ENST00000484556 QTRT2Q9H974 415 aaKnown RBP28.51■■■□□ 2.15
DDR1-245ENST00000484556 SETD5Q9C0A6 1442 aa28.49■■■□□ 2.15
DDR1-245ENST00000484556 SETBP1Q9Y6X0 1596 aa28.48■■■□□ 2.15
DDR1-245ENST00000484556 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
DDR1-245ENST00000484556 CHIC2Q9UKJ5 165 aa28.46■■■□□ 2.15
DDR1-245ENST00000484556 HDGFP51858 240 aaKnown RBP28.44■■■□□ 2.14
DDR1-245ENST00000484556 ATAD2Q6PL18 1390 aa28.44■■■□□ 2.14
DDR1-245ENST00000484556 RPRD2Q5VT52 1461 aaKnown RBP28.43■■■□□ 2.14
DDR1-245ENST00000484556 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
DDR1-245ENST00000484556 ZRANB1Q9UGI0 708 aa28.42■■■□□ 2.14
DDR1-245ENST00000484556 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
DDR1-245ENST00000484556 TRPM2O94759 1503 aa28.41■■■□□ 2.14
DDR1-245ENST00000484556 PTPRUQ92729 1446 aa28.41■■■□□ 2.14
DDR1-245ENST00000484556 PNPLA6Q8IY17 1366 aa28.4■■■□□ 2.14
DDR1-245ENST00000484556 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
DDR1-245ENST00000484556 DDX17Q92841 729 aaKnown RBP28.4■■■□□ 2.14
DDR1-245ENST00000484556 MST1RQ04912 1400 aa28.4■■■□□ 2.14
DDR1-245ENST00000484556 DCCP43146 1447 aa28.39■■■□□ 2.14
DDR1-245ENST00000484556 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
DDR1-245ENST00000484556 LRRC59Q96AG4 307 aaKnown RBP28.38■■■□□ 2.13
DDR1-245ENST00000484556 AMOTL2Q9Y2J4 779 aa28.38■■■□□ 2.13
DDR1-245ENST00000484556 ADAMTS2O95450 1211 aa28.36■■■□□ 2.13
DDR1-245ENST00000484556 NGLY1Q96IV0 654 aa28.36■■■□□ 2.13
DDR1-245ENST00000484556 UNC13BO14795 1591 aa28.34■■■□□ 2.13
DDR1-245ENST00000484556 XRN1Q8IZH2 1706 aaKnown RBP28.34■■■□□ 2.13
DDR1-245ENST00000484556 EP400Q96L91 3159 aa28.32■■■□□ 2.12
DDR1-245ENST00000484556 FOXD1Q16676 465 aa28.3■■■□□ 2.12
DDR1-245ENST00000484556 USP21Q9UK80 565 aa28.27■■■□□ 2.12
DDR1-245ENST00000484556 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
DDR1-245ENST00000484556 E9PCH4 1651 aa28.26■■■□□ 2.12
DDR1-245ENST00000484556 ADGRL2O95490 1459 aa28.26■■■□□ 2.11
DDR1-245ENST00000484556 NALCNQ8IZF0 1738 aa28.26■■■□□ 2.11
DDR1-245ENST00000484556 ANKRD50Q9ULJ7 1429 aa28.24■■■□□ 2.11
DDR1-245ENST00000484556 TRPC5Q9UL62 973 aaPredicted RBP28.23■■■□□ 2.11
DDR1-245ENST00000484556 ADGRL3Q9HAR2 1447 aa28.21■■■□□ 2.11
DDR1-245ENST00000484556 ATRNO75882 1429 aa28.2■■■□□ 2.11
DDR1-245ENST00000484556 LAMC1P11047 1609 aa28.16■■■□□ 2.1
DDR1-245ENST00000484556 METP08581 1390 aa28.15■■■□□ 2.1
DDR1-245ENST00000484556 FNBP4Q8N3X1 1017 aaPredicted RBP28.14■■■□□ 2.1
DDR1-245ENST00000484556 PTCH1Q13635 1447 aa28.14■■■□□ 2.1
DDR1-245ENST00000484556 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.09
DDR1-245ENST00000484556 CCDC125Q86Z20 511 aa28.12■■■□□ 2.09
DDR1-245ENST00000484556 COL22A1Q8NFW1 1626 aaPredicted RBP28.1■■■□□ 2.09
DDR1-245ENST00000484556 IQGAP3Q86VI3 1631 aa28.09■■■□□ 2.09
DDR1-245ENST00000484556 SOS2Q07890 1332 aaPredicted RBP28.09■■■□□ 2.09
DDR1-245ENST00000484556 LRP5O75197 1615 aa28.08■■■□□ 2.09
DDR1-245ENST00000484556 ORAI2Q96SN7 254 aa28.07■■■□□ 2.08
DDR1-245ENST00000484556 MARF1Q9Y4F3 1742 aaKnown RBP28.06■■■□□ 2.08
DDR1-245ENST00000484556 BCL9LQ86UU0 1499 aa28.06■■■□□ 2.08
DDR1-245ENST00000484556 MYOM2P54296 1465 aa28.03■■■□□ 2.08
DDR1-245ENST00000484556 FAM50AQ14320 339 aaKnown RBP28.03■■■□□ 2.08
DDR1-245ENST00000484556 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
DDR1-245ENST00000484556 DEFB132Q7Z7B7 95 aa28.02■■■□□ 2.08
DDR1-245ENST00000484556 APLP2Q06481 763 aa28.01■■■□□ 2.07
DDR1-245ENST00000484556 LOC105371045A0A1W2PR82 267 aa28■■■□□ 2.07
DDR1-245ENST00000484556 BRWD3Q6RI45 1802 aa27.99■■■□□ 2.07
DDR1-245ENST00000484556 ZNF326Q5BKZ1 582 aaKnown RBP27.99■■■□□ 2.07
DDR1-245ENST00000484556 GJD4Q96KN9 370 aaPredicted RBP27.99■■■□□ 2.07
DDR1-245ENST00000484556 GLI3P10071 1580 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms