RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PPP4CP60510 307 aa5.53□□□□□ -1.52
ITGB1-213ENST00000484088 NYAP1Q6ZVC0 841 aa5.53□□□□□ -1.52
ITGB1-213ENST00000484088 DNAJB2P25686 324 aa5.52□□□□□ -1.53
ITGB1-213ENST00000484088 LCE2BO14633 110 aa5.51□□□□□ -1.53
ITGB1-213ENST00000484088 RBM46Q8TBY0 533 aaKnown RBP5.5□□□□□ -1.53
ITGB1-213ENST00000484088 TMUB1Q9BVT8 246 aa5.5□□□□□ -1.53
ITGB1-213ENST00000484088 REPIN1Q9BWE0 567 aaKnown RBP5.5□□□□□ -1.53
ITGB1-213ENST00000484088 KCNC4Q03721 635 aa5.49□□□□□ -1.53
ITGB1-213ENST00000484088 BLOC1S3Q6QNY0 202 aa5.49□□□□□ -1.53
ITGB1-213ENST00000484088 GPIHBP1Q8IV16 184 aa5.49□□□□□ -1.53
ITGB1-213ENST00000484088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.48□□□□□ -1.53
ITGB1-213ENST00000484088 TLL1O43897 1013 aa5.48□□□□□ -1.53
ITGB1-213ENST00000484088 SLF2Q8IX21 1173 aa5.48□□□□□ -1.53
ITGB1-213ENST00000484088 IRF6O14896 467 aa5.47□□□□□ -1.53
ITGB1-213ENST00000484088 ACTN4O43707 911 aaKnown RBP5.47□□□□□ -1.53
ITGB1-213ENST00000484088 RNF40O75150 1001 aa5.47□□□□□ -1.53
ITGB1-213ENST00000484088 COPS2P61201 443 aa5.47□□□□□ -1.53
ITGB1-213ENST00000484088 PPP1R18Q6NYC8 613 aa5.47□□□□□ -1.53
ITGB1-213ENST00000484088 IL21Q9HBE4 155 aa5.47□□□□□ -1.53
ITGB1-213ENST00000484088 ZPR1O75312 459 aa5.46□□□□□ -1.54
ITGB1-213ENST00000484088 OATP04181 439 aa5.46□□□□□ -1.54
ITGB1-213ENST00000484088 CFHP08603 1231 aa5.46□□□□□ -1.54
ITGB1-213ENST00000484088 TPRNQ4KMQ1 711 aa5.46□□□□□ -1.54
ITGB1-213ENST00000484088 SMYD5Q6GMV2 418 aa5.46□□□□□ -1.54
ITGB1-213ENST00000484088 ZMYND10O75800 440 aa5.45□□□□□ -1.54
ITGB1-213ENST00000484088 RGS20O76081 388 aa5.45□□□□□ -1.54
ITGB1-213ENST00000484088 MAP2K5Q13163 448 aa5.45□□□□□ -1.54
ITGB1-213ENST00000484088 CCDC102AQ96A19 550 aa5.45□□□□□ -1.54
ITGB1-213ENST00000484088 THAP11Q96EK4 314 aa5.45□□□□□ -1.54
ITGB1-213ENST00000484088 DAXXQ9UER7 740 aaPredicted RBP5.45□□□□□ -1.54
ITGB1-213ENST00000484088 PUS10Q3MIT2 529 aaKnown RBP5.44□□□□□ -1.54
ITGB1-213ENST00000484088 PLA2G2CQ5R387 149 aa5.44□□□□□ -1.54
ITGB1-213ENST00000484088 LMOD2Q6P5Q4 547 aa5.44□□□□□ -1.54
ITGB1-213ENST00000484088 ZC3H15Q8WU90 426 aaKnown RBP5.44□□□□□ -1.54
ITGB1-213ENST00000484088 GCGRP47871 477 aa5.43□□□□□ -1.54
ITGB1-213ENST00000484088 TRIM67Q6ZTA4 783 aa5.43□□□□□ -1.54
ITGB1-213ENST00000484088 HLA-CQ95604 372 aa5.43□□□□□ -1.54
ITGB1-213ENST00000484088 PPEF1O14829 653 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-213ENST00000484088 CD46P15529 392 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 FUT2Q10981 343 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 MORN1Q5T089 497 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 BARGINQ6ZT62 677 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 SCUBE3Q8IX30 993 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 PCDHB3Q9Y5E6 796 aa5.42□□□□□ -1.54
ITGB1-213ENST00000484088 RNF223E7ERA6 249 aa5.41□□□□□ -1.54
ITGB1-213ENST00000484088 FAM160A2Q8N612 972 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-213ENST00000484088 MINK1Q8N4C8 1332 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-213ENST00000484088 DDX11L8A8MPP1 907 aa5.4□□□□□ -1.54
ITGB1-213ENST00000484088 HDGFP51858 240 aaKnown RBP5.4□□□□□ -1.54
ITGB1-213ENST00000484088 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.4□□□□□ -1.54
ITGB1-213ENST00000484088 SLC27A5Q9Y2P5 690 aa5.4□□□□□ -1.54
ITGB1-213ENST00000484088 S1PR4O95977 384 aa5.39□□□□□ -1.55
ITGB1-213ENST00000484088 MDM2Q00987 491 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-213ENST00000484088 RNF19BQ6ZMZ0 732 aa5.39□□□□□ -1.55
ITGB1-213ENST00000484088 LIAT1Q6ZQX7 453 aa5.39□□□□□ -1.55
ITGB1-213ENST00000484088 FAM217BQ9NTX9 383 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-213ENST00000484088 PRKD2Q9BZL6 878 aa5.38□□□□□ -1.55
ITGB1-213ENST00000484088 PRDM9Q9NQV7 894 aa5.38□□□□□ -1.55
ITGB1-213ENST00000484088 BRICD5Q6PL45 260 aa5.37□□□□□ -1.55
ITGB1-213ENST00000484088 ADH1BP00325 375 aa5.36□□□□□ -1.55
ITGB1-213ENST00000484088 GUCA2AQ02747 115 aa5.36□□□□□ -1.55
ITGB1-213ENST00000484088 AMHR2Q16671 573 aa5.36□□□□□ -1.55
ITGB1-213ENST00000484088 KMT5BQ4FZB7 885 aa5.36□□□□□ -1.55
ITGB1-213ENST00000484088 PCDHGC3Q9UN70 934 aa5.36□□□□□ -1.55
ITGB1-213ENST00000484088 RDH13Q8NBN7 331 aa5.35□□□□□ -1.55
ITGB1-213ENST00000484088 NECTIN2Q92692 538 aa5.35□□□□□ -1.55
ITGB1-213ENST00000484088 TRIM66O15016 1216 aa5.34□□□□□ -1.55
ITGB1-213ENST00000484088 MS4A1P11836 297 aa5.34□□□□□ -1.55
ITGB1-213ENST00000484088 ATP6V1AP38606 617 aa5.34□□□□□ -1.55
ITGB1-213ENST00000484088 PRR14Q9BWN1 585 aa5.34□□□□□ -1.55
ITGB1-213ENST00000484088 V9GY48 417 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-213ENST00000484088 HOXA2O43364 376 aa5.33□□□□□ -1.56
ITGB1-213ENST00000484088 PARP9Q8IXQ6 854 aa5.33□□□□□ -1.56
ITGB1-213ENST00000484088 ANKLE1Q8NAG6 615 aa5.33□□□□□ -1.56
ITGB1-213ENST00000484088 SYMPKQ92797 1274 aaKnown RBP5.33□□□□□ -1.56
ITGB1-213ENST00000484088 SPSB2Q99619 263 aa5.33□□□□□ -1.56
ITGB1-213ENST00000484088 IRX2Q9BZI1 471 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-213ENST00000484088 GPCPD1Q9NPB8 672 aa5.33□□□□□ -1.56
ITGB1-213ENST00000484088 SALL2Q9Y467 1007 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-213ENST00000484088 NR1I2O75469 434 aa5.32□□□□□ -1.56
ITGB1-213ENST00000484088 SPRYD7Q5W111 196 aa5.32□□□□□ -1.56
ITGB1-213ENST00000484088 SLC6A16Q9GZN6 736 aa5.32□□□□□ -1.56
ITGB1-213ENST00000484088 GDF9O60383 454 aa5.31□□□□□ -1.56
ITGB1-213ENST00000484088 KDM4AO75164 1064 aa5.31□□□□□ -1.56
ITGB1-213ENST00000484088 FBXO31Q5XUX0 539 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-213ENST00000484088 SULF1Q8IWU6 871 aa5.31□□□□□ -1.56
ITGB1-213ENST00000484088 PKD2L1Q9P0L9 805 aa5.31□□□□□ -1.56
ITGB1-213ENST00000484088 NDUFV2P19404 249 aa5.3□□□□□ -1.56
ITGB1-213ENST00000484088 SSTR3P32745 418 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-213ENST00000484088 MMP16P51512 607 aa5.3□□□□□ -1.56
ITGB1-213ENST00000484088 GIGYF2Q6Y7W6 1299 aaKnown RBP5.3□□□□□ -1.56
ITGB1-213ENST00000484088 SPIRE2Q8WWL2 714 aa5.3□□□□□ -1.56
ITGB1-213ENST00000484088 SLC24A3Q9HC58 644 aa5.3□□□□□ -1.56
ITGB1-213ENST00000484088 CLCN1P35523 988 aa5.29□□□□□ -1.56
ITGB1-213ENST00000484088 SLC19A1P41440 591 aa5.29□□□□□ -1.56
ITGB1-213ENST00000484088 SLC4A3P48751 1232 aa5.29□□□□□ -1.56
ITGB1-213ENST00000484088 MSS51Q4VC12 460 aa5.29□□□□□ -1.56
ITGB1-213ENST00000484088 MOXD2PA6NHM9 499 aa5.28□□□□□ -1.56
ITGB1-213ENST00000484088 GFRA3O60609 400 aa5.28□□□□□ -1.56
ITGB1-213ENST00000484088 DXOO77932 396 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms