RNA–Protein interactions for RNA: ENST00000483866.1

KDM3A-211, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 449 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-211ENST00000483866 RUSC2Q8N2Y8 1516 aa7.05□□□□□ -1.28
KDM3A-211ENST00000483866 TDRD9Q8NDG6 1382 aaKnown RBP7.05□□□□□ -1.28
KDM3A-211ENST00000483866 KIF21BO75037 1637 aa7.05□□□□□ -1.28
KDM3A-211ENST00000483866 ARID3CA6NKF2 412 aa7.04□□□□□ -1.28
KDM3A-211ENST00000483866 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
KDM3A-211ENST00000483866 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
KDM3A-211ENST00000483866 FBXW7Q969H0 707 aa7.04□□□□□ -1.28
KDM3A-211ENST00000483866 PHOX2BQ99453 314 aa7.04□□□□□ -1.28
KDM3A-211ENST00000483866 CARMIL1Q5VZK9 1371 aa7.04□□□□□ -1.28
KDM3A-211ENST00000483866 APBB1O00213 710 aa7.03□□□□□ -1.28
KDM3A-211ENST00000483866 FAM161AQ3B820 660 aa7.03□□□□□ -1.28
KDM3A-211ENST00000483866 JPH4Q96JJ6 628 aa7.03□□□□□ -1.28
KDM3A-211ENST00000483866 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
KDM3A-211ENST00000483866 MAGI1Q96QZ7 1491 aaPredicted RBP7.03□□□□□ -1.28
KDM3A-211ENST00000483866 PRXQ9BXM0 1461 aa7.03□□□□□ -1.28
KDM3A-211ENST00000483866 ONECUT3O60422 494 aaPredicted RBP7.02□□□□□ -1.29
KDM3A-211ENST00000483866 NLRP7Q8WX94 980 aa7.02□□□□□ -1.29
KDM3A-211ENST00000483866 BEGAINQ9BUH8 593 aa7.02□□□□□ -1.29
KDM3A-211ENST00000483866 C1orf115Q9H7X2 142 aa7.02□□□□□ -1.29
KDM3A-211ENST00000483866 AQRO60306 1485 aaKnown RBP eCLIP7.02□□□□□ -1.299e-12■■■□□ 15.2
KDM3A-211ENST00000483866 RAPGEF2Q9Y4G8 1499 aa7.02□□□□□ -1.29
KDM3A-211ENST00000483866 EIF4G3O43432 1585 aaKnown RBP7.02□□□□□ -1.29
KDM3A-211ENST00000483866 FHAD1B1AJZ9 1412 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
KDM3A-211ENST00000483866 GOLGA3Q08378 1498 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 SNPHO15079 494 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 ST18O60284 1047 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 OATP04181 439 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 SKIV2LQ15477 1246 aaKnown RBP7.01□□□□□ -1.29
KDM3A-211ENST00000483866 PADI6Q6TGC4 694 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 METTL3Q86U44 580 aaKnown RBP7.01□□□□□ -1.29
KDM3A-211ENST00000483866 CERKQ8TCT0 537 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
KDM3A-211ENST00000483866 ZNF454Q8N9F8 522 aa7□□□□□ -1.29
KDM3A-211ENST00000483866 FAM217BQ9NTX9 383 aaPredicted RBP7□□□□□ -1.29
KDM3A-211ENST00000483866 TNIKQ9UKE5 1360 aa6.99□□□□□ -1.29
KDM3A-211ENST00000483866 FOSBP53539 338 aa6.99□□□□□ -1.29
KDM3A-211ENST00000483866 MCM6Q14566 821 aa6.99□□□□□ -1.29
KDM3A-211ENST00000483866 ZDHHC16Q969W1 377 aa6.99□□□□□ -1.29
KDM3A-211ENST00000483866 POLR3EQ9NVU0 708 aa6.99□□□□□ -1.29
KDM3A-211ENST00000483866 A6NJR5 290 aa6.98□□□□□ -1.29
KDM3A-211ENST00000483866 C6orf132Q5T0Z8 1188 aa6.98□□□□□ -1.29
KDM3A-211ENST00000483866 PROCA1Q8NCQ7 364 aaPredicted RBP6.98□□□□□ -1.29
KDM3A-211ENST00000483866 PXYLP1Q8TE99 480 aa6.98□□□□□ -1.29
KDM3A-211ENST00000483866 CHMP7Q8WUX9 453 aaPredicted RBP6.98□□□□□ -1.29
KDM3A-211ENST00000483866 ADGRG1Q9Y653 693 aa6.98□□□□□ -1.29
KDM3A-211ENST00000483866 SYNJ2O15056 1496 aa6.98□□□□□ -1.29
KDM3A-211ENST00000483866 LOC105371045A0A1W2PR82 267 aa6.97□□□□□ -1.29
KDM3A-211ENST00000483866 TRAK2O60296 914 aa6.97□□□□□ -1.29
KDM3A-211ENST00000483866 ADAMTS12P58397 1594 aa6.97□□□□□ -1.29
KDM3A-211ENST00000483866 NUDT7P0C024 238 aa6.96□□□□□ -1.3
KDM3A-211ENST00000483866 SNAPC4Q5SXM2 1469 aa6.96□□□□□ -1.3
KDM3A-211ENST00000483866 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.3
KDM3A-211ENST00000483866 RAD21O60216 631 aa6.95□□□□□ -1.3
KDM3A-211ENST00000483866 CLK2P49760 499 aaKnown RBP6.95□□□□□ -1.3
KDM3A-211ENST00000483866 MYSM1Q5VVJ2 828 aa6.95□□□□□ -1.3
KDM3A-211ENST00000483866 RBM46Q8TBY0 533 aaKnown RBP6.95□□□□□ -1.3
KDM3A-211ENST00000483866 PODXL2Q9NZ53 605 aa6.95□□□□□ -1.3
KDM3A-211ENST00000483866 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
KDM3A-211ENST00000483866 GRIN2AQ12879 1464 aa6.94□□□□□ -1.3
KDM3A-211ENST00000483866 KDM4FA0A1W2PPD8 638 aa6.94□□□□□ -1.3
KDM3A-211ENST00000483866 PROSER2Q86WR7 435 aaPredicted RBP6.94□□□□□ -1.3
KDM3A-211ENST00000483866 CCDC82Q8N4S0 544 aa6.94□□□□□ -1.3
KDM3A-211ENST00000483866 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
KDM3A-211ENST00000483866 ADAM33Q9BZ11 813 aa6.94□□□□□ -1.3
KDM3A-211ENST00000483866 PRSS12P56730 875 aa6.93□□□□□ -1.3
KDM3A-211ENST00000483866 DOK7Q18PE1 504 aa6.93□□□□□ -1.3
KDM3A-211ENST00000483866 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
KDM3A-211ENST00000483866 KHSRPQ92945 711 aaKnown RBP eCLIP6.93□□□□□ -1.3
KDM3A-211ENST00000483866 CDCA7LQ96GN5 454 aa6.93□□□□□ -1.3
KDM3A-211ENST00000483866 KIAA0586Q9BVV6 1533 aa6.92□□□□□ -1.3
KDM3A-211ENST00000483866 RIMBP2O15034 1052 aa6.92□□□□□ -1.3
KDM3A-211ENST00000483866 DIXDC1Q155Q3 683 aa6.92□□□□□ -1.3
KDM3A-211ENST00000483866 TTC13Q8NBP0 860 aa6.92□□□□□ -1.3
KDM3A-211ENST00000483866 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.92□□□□□ -1.3
KDM3A-211ENST00000483866 CHD1O14646 1710 aa6.92□□□□□ -1.3
KDM3A-211ENST00000483866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.91□□□□□ -1.3
KDM3A-211ENST00000483866 POM121Q96HA1 1249 aa6.91□□□□□ -1.3
KDM3A-211ENST00000483866 ZNF777Q9ULD5 760 aaPredicted RBP6.91□□□□□ -1.3
KDM3A-211ENST00000483866 NUP160Q12769 1436 aa6.91□□□□□ -1.3
KDM3A-211ENST00000483866 SPDYE5A6NIY4 337 aa6.9□□□□□ -1.3
KDM3A-211ENST00000483866 MARVELD3Q96A59 401 aa6.9□□□□□ -1.3
KDM3A-211ENST00000483866 RCCD1A6NED2 376 aa6.89□□□□□ -1.31
KDM3A-211ENST00000483866 RFC5P40937 340 aa6.89□□□□□ -1.31
KDM3A-211ENST00000483866 TRIM26Q12899 539 aaPredicted RBP6.89□□□□□ -1.31
KDM3A-211ENST00000483866 ZNF710Q8N1W2 664 aa6.89□□□□□ -1.31
KDM3A-211ENST00000483866 EFCAB5A4FU69 1503 aa6.89□□□□□ -1.31
KDM3A-211ENST00000483866 IQGAP2Q13576 1575 aa6.89□□□□□ -1.31
KDM3A-211ENST00000483866 CLIP1P30622 1438 aa6.88□□□□□ -1.31
KDM3A-211ENST00000483866 CEP162Q5TB80 1403 aa6.88□□□□□ -1.31
KDM3A-211ENST00000483866 PPP4R3BQ5MIZ7 849 aa6.88□□□□□ -1.31
KDM3A-211ENST00000483866 LIMD1Q9UGP4 676 aa6.88□□□□□ -1.31
KDM3A-211ENST00000483866 UGGT2Q9NYU1 1516 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 DDX11L8A8MPP1 907 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 HOXB3P14651 431 aaPredicted RBP6.87□□□□□ -1.31
KDM3A-211ENST00000483866 COL9A1P20849 921 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 CSPP1Q1MSJ5 1256 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 RIC3Q7Z5B4 369 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 NUTM1Q86Y26 1132 aa6.87□□□□□ -1.31
KDM3A-211ENST00000483866 SULF1Q8IWU6 871 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms