RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 FER1L4A9Z1Z3 1794 aa14.29□□□□□ -0.12
HDAC6-226ENST00000483656 PPLO60437 1756 aa14.29□□□□□ -0.12
HDAC6-226ENST00000483656 CEBPAP49715 358 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-226ENST00000483656 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
HDAC6-226ENST00000483656 TNRQ92752 1358 aa14.28□□□□□ -0.12
HDAC6-226ENST00000483656 CARD11Q9BXL7 1154 aa14.28□□□□□ -0.12
HDAC6-226ENST00000483656 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.12
HDAC6-226ENST00000483656 C3P01024 1663 aa14.27□□□□□ -0.12
HDAC6-226ENST00000483656 ROCK2O75116 1388 aaKnown RBP14.27□□□□□ -0.12
HDAC6-226ENST00000483656 USP47Q96K76 1375 aa14.27□□□□□ -0.12
HDAC6-226ENST00000483656 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
HDAC6-226ENST00000483656 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
HDAC6-226ENST00000483656 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
HDAC6-226ENST00000483656 LAMC1P11047 1609 aa14.26□□□□□ -0.13
HDAC6-226ENST00000483656 ZFYVE9O95405 1425 aa14.24□□□□□ -0.13
HDAC6-226ENST00000483656 KIAA1210Q9ULL0 1709 aa14.24□□□□□ -0.13
HDAC6-226ENST00000483656 C11orf95C9JLR9 678 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-226ENST00000483656 CFAP70Q5T0N1 1121 aa14.24□□□□□ -0.13
HDAC6-226ENST00000483656 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
HDAC6-226ENST00000483656 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-226ENST00000483656 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
HDAC6-226ENST00000483656 C14orf93Q9H972 538 aaKnown RBP14.22□□□□□ -0.13
HDAC6-226ENST00000483656 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-226ENST00000483656 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
HDAC6-226ENST00000483656 WASHC2AQ641Q2 1341 aa14.2□□□□□ -0.14
HDAC6-226ENST00000483656 NLRP1Q9C000 1473 aa14.2□□□□□ -0.14
HDAC6-226ENST00000483656 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
HDAC6-226ENST00000483656 RIMS2Q9UQ26 1411 aa14.2□□□□□ -0.14
HDAC6-226ENST00000483656 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
HDAC6-226ENST00000483656 PLPPR3Q6T4P5 718 aa14.19□□□□□ -0.14
HDAC6-226ENST00000483656 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
HDAC6-226ENST00000483656 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
HDAC6-226ENST00000483656 CCDC7Q96M83 1385 aa14.18□□□□□ -0.14
HDAC6-226ENST00000483656 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
HDAC6-226ENST00000483656 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
HDAC6-226ENST00000483656 SETBP1Q9Y6X0 1596 aa14.17□□□□□ -0.14
HDAC6-226ENST00000483656 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
HDAC6-226ENST00000483656 TESK2Q96S53 571 aa14.16□□□□□ -0.14
HDAC6-226ENST00000483656 KIF7Q2M1P5 1343 aa14.15□□□□□ -0.14
HDAC6-226ENST00000483656 TMEM2Q9UHN6 1383 aa14.15□□□□□ -0.14
HDAC6-226ENST00000483656 ILDR2Q71H61 639 aa14.15□□□□□ -0.14
HDAC6-226ENST00000483656 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
HDAC6-226ENST00000483656 MYO3AQ8NEV4 1616 aa14.14□□□□□ -0.15
HDAC6-226ENST00000483656 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
HDAC6-226ENST00000483656 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC6-226ENST00000483656 POLR1AO95602 1720 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-226ENST00000483656 PTPRMP28827 1452 aa14.12□□□□□ -0.15
HDAC6-226ENST00000483656 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
HDAC6-226ENST00000483656 ALKQ9UM73 1620 aa14.12□□□□□ -0.15
HDAC6-226ENST00000483656 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-226ENST00000483656 LTKP29376 864 aa14.11□□□□□ -0.15
HDAC6-226ENST00000483656 NRXN3Q9Y4C0 1643 aa14.11□□□□□ -0.15
HDAC6-226ENST00000483656 SLIT1O75093 1534 aa14.1□□□□□ -0.15
HDAC6-226ENST00000483656 MIER1Q8N108 512 aa14.1□□□□□ -0.15
HDAC6-226ENST00000483656 SETD1AO15047 1707 aaKnown RBP14.1□□□□□ -0.15
HDAC6-226ENST00000483656 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
HDAC6-226ENST00000483656 CEP170BQ9Y4F5 1589 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-226ENST00000483656 HDGFP51858 240 aaKnown RBP14.09□□□□□ -0.15
HDAC6-226ENST00000483656 TRAK1Q9UPV9 953 aa14.09□□□□□ -0.15
HDAC6-226ENST00000483656 THEMISQ8N1K5 641 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-226ENST00000483656 EIF3AQ14152 1382 aaKnown RBP14.08□□□□□ -0.16
HDAC6-226ENST00000483656 TXNDC2Q86VQ3 553 aa14.07□□□□□ -0.16
HDAC6-226ENST00000483656 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-226ENST00000483656 PLEKHG1Q9ULL1 1385 aa14.07□□□□□ -0.16
HDAC6-226ENST00000483656 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
HDAC6-226ENST00000483656 SETD1BQ9UPS6 1966 aaKnown RBP14.06□□□□□ -0.16
HDAC6-226ENST00000483656 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
HDAC6-226ENST00000483656 TMF1P82094 1093 aa14.05□□□□□ -0.16
HDAC6-226ENST00000483656 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-226ENST00000483656 METP08581 1390 aa14.05□□□□□ -0.16
HDAC6-226ENST00000483656 MED14O60244 1454 aa14.05□□□□□ -0.16
HDAC6-226ENST00000483656 ARHGEF28Q8N1W1 1705 aaKnown RBP14.04□□□□□ -0.16
HDAC6-226ENST00000483656 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
HDAC6-226ENST00000483656 STK26Q9P289 416 aa14.04□□□□□ -0.16
HDAC6-226ENST00000483656 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
HDAC6-226ENST00000483656 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
HDAC6-226ENST00000483656 LRPPRCP42704 1394 aaKnown RBP14.03□□□□□ -0.16
HDAC6-226ENST00000483656 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
HDAC6-226ENST00000483656 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
HDAC6-226ENST00000483656 DLC1Q96QB1 1528 aa14□□□□□ -0.17
HDAC6-226ENST00000483656 BCANQ96GW7 911 aa13.99□□□□□ -0.17
HDAC6-226ENST00000483656 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
HDAC6-226ENST00000483656 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
HDAC6-226ENST00000483656 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
HDAC6-226ENST00000483656 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
HDAC6-226ENST00000483656 TECPR2O15040 1411 aa13.98□□□□□ -0.17
HDAC6-226ENST00000483656 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
HDAC6-226ENST00000483656 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
HDAC6-226ENST00000483656 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
HDAC6-226ENST00000483656 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
HDAC6-226ENST00000483656 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.17
HDAC6-226ENST00000483656 TULP4Q9NRJ4 1543 aa13.96□□□□□ -0.17
HDAC6-226ENST00000483656 SAFB2Q14151 953 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC6-226ENST00000483656 WAPLQ7Z5K2 1190 aa13.96□□□□□ -0.17
HDAC6-226ENST00000483656 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
HDAC6-226ENST00000483656 ANP32CO43423 234 aa13.95□□□□□ -0.18
HDAC6-226ENST00000483656 POGKQ9P215 609 aa13.95□□□□□ -0.18
HDAC6-226ENST00000483656 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
HDAC6-226ENST00000483656 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-226ENST00000483656 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms