RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 PCMTD1Q96MG8 357 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 MYO6Q9UM54 1294 aa11.61□□□□□ -0.55
VEGFA-212ENST00000480614 RUFY1Q96T51 708 aa11.61□□□□□ -0.55
VEGFA-212ENST00000480614 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
VEGFA-212ENST00000480614 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
VEGFA-212ENST00000480614 WIZO95785 1651 aa11.6□□□□□ -0.55
VEGFA-212ENST00000480614 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
VEGFA-212ENST00000480614 VPS37DQ86XT2 251 aa11.6□□□□□ -0.55
VEGFA-212ENST00000480614 MTERF4Q7Z6M4 381 aaKnown RBP11.6□□□□□ -0.55
VEGFA-212ENST00000480614 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
VEGFA-212ENST00000480614 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
VEGFA-212ENST00000480614 TEFQ10587 303 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 FOXD1Q16676 465 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 KIF3BO15066 747 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 NAT10Q9H0A0 1025 aaKnown RBP11.59□□□□□ -0.55
VEGFA-212ENST00000480614 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 DCTN1Q14203 1278 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
VEGFA-212ENST00000480614 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
VEGFA-212ENST00000480614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.58□□□□□ -0.55
VEGFA-212ENST00000480614 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
VEGFA-212ENST00000480614 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
VEGFA-212ENST00000480614 IFIT2P09913 472 aaKnown RBP11.58□□□□□ -0.56
VEGFA-212ENST00000480614 MIA2Q96PC5 1412 aa11.58□□□□□ -0.56
VEGFA-212ENST00000480614 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.56
VEGFA-212ENST00000480614 EVA1CP58658 441 aa11.58□□□□□ -0.56
VEGFA-212ENST00000480614 ANKRD45Q5TZF3 282 aa11.58□□□□□ -0.56
VEGFA-212ENST00000480614 ERICH2A1L162 156 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 MAP7D2Q96T17 732 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 EPS15P42566 896 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 NUCB2P80303 420 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 CT47A1Q5JQC4 288 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-212ENST00000480614 CCDC73Q6ZRK6 1079 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 VGFO15240 615 aaPredicted RBP11.57□□□□□ -0.56
VEGFA-212ENST00000480614 ERC2O15083 957 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 ODF2Q5BJF6 829 aa11.57□□□□□ -0.56
VEGFA-212ENST00000480614 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
VEGFA-212ENST00000480614 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 ANO2Q9NQ90 1003 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 CLUAP1Q96AJ1 413 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 CCDC173Q0VFZ6 552 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 HOMER1Q86YM7 354 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 NFXL1Q6ZNB6 911 aa11.56□□□□□ -0.56
VEGFA-212ENST00000480614 APPP05067 770 aa11.55□□□□□ -0.56
VEGFA-212ENST00000480614 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
VEGFA-212ENST00000480614 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
VEGFA-212ENST00000480614 CCP110O43303 1012 aa11.55□□□□□ -0.56
VEGFA-212ENST00000480614 DHX8Q14562 1220 aaKnown RBP11.55□□□□□ -0.56
VEGFA-212ENST00000480614 FOXD4L5Q5VV16 416 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-212ENST00000480614 FOXD4L4Q8WXT5 416 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-212ENST00000480614 HSP90B2PQ58FF3 399 aa11.55□□□□□ -0.56
VEGFA-212ENST00000480614 USP47Q96K76 1375 aa11.55□□□□□ -0.56
VEGFA-212ENST00000480614 GSE1Q14687 1217 aa11.54□□□□□ -0.56
VEGFA-212ENST00000480614 ZNF771Q7L3S4 317 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-212ENST00000480614 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.54□□□□□ -0.56
VEGFA-212ENST00000480614 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
VEGFA-212ENST00000480614 ERCC4Q92889 916 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-212ENST00000480614 CWC22Q9HCG8 908 aaKnown RBP11.54□□□□□ -0.56
VEGFA-212ENST00000480614 OLFM4Q6UX06 510 aa11.54□□□□□ -0.56
VEGFA-212ENST00000480614 XBP1P17861 261 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 INTS3Q68E01 1043 aaKnown RBP11.53□□□□□ -0.56
VEGFA-212ENST00000480614 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 CWC15Q9P013 229 aaKnown RBP11.53□□□□□ -0.56
VEGFA-212ENST00000480614 CCDC191Q8NCU4 936 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.561e-6■■□□□ 13.8
VEGFA-212ENST00000480614 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 SASS6Q6UVJ0 657 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
VEGFA-212ENST00000480614 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
VEGFA-212ENST00000480614 VSIG10Q8N0Z9 540 aa11.52□□□□□ -0.56
VEGFA-212ENST00000480614 MNS1Q8NEH6 495 aa11.52□□□□□ -0.56
VEGFA-212ENST00000480614 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
VEGFA-212ENST00000480614 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.57
VEGFA-212ENST00000480614 STAC3Q96MF2 364 aa11.52□□□□□ -0.57
VEGFA-212ENST00000480614 SMARCA4P51532 1647 aa11.52□□□□□ -0.57
VEGFA-212ENST00000480614 NAP1L1P55209 391 aaKnown RBP11.52□□□□□ -0.57
VEGFA-212ENST00000480614 PANK3Q9H999 370 aa11.51□□□□□ -0.57
VEGFA-212ENST00000480614 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
VEGFA-212ENST00000480614 ZRSR2Q15696 482 aaKnown RBP11.51□□□□□ -0.57
VEGFA-212ENST00000480614 OFD1O75665 1012 aa11.51□□□□□ -0.57
VEGFA-212ENST00000480614 SMC3Q9UQE7 1217 aa11.51□□□□□ -0.57
VEGFA-212ENST00000480614 SART3Q15020 963 aaKnown RBP11.51□□□□□ -0.57
VEGFA-212ENST00000480614 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
VEGFA-212ENST00000480614 CHMP5Q9NZZ3 219 aa11.5□□□□□ -0.57
VEGFA-212ENST00000480614 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
VEGFA-212ENST00000480614 FHOD3Q2V2M9 1422 aa11.5□□□□□ -0.57
VEGFA-212ENST00000480614 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
VEGFA-212ENST00000480614 PDCP20941 246 aa11.5□□□□□ -0.57
VEGFA-212ENST00000480614 TXLNBQ8N3L3 684 aa11.49□□□□□ -0.57
VEGFA-212ENST00000480614 PIP4K2AP48426 406 aaPredicted RBP11.49□□□□□ -0.57
VEGFA-212ENST00000480614 TRAK1Q9UPV9 953 aa11.49□□□□□ -0.57
VEGFA-212ENST00000480614 PDE4AP27815 886 aa11.49□□□□□ -0.57
VEGFA-212ENST00000480614 LETM1O95202 739 aaPredicted RBP11.48□□□□□ -0.57
VEGFA-212ENST00000480614 DZIP1LQ8IYY4 767 aaKnown RBP11.48□□□□□ -0.57
VEGFA-212ENST00000480614 HIP1O00291 1037 aa11.48□□□□□ -0.57
VEGFA-212ENST00000480614 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms